502 results match your criteria: "cE3c - Centre for Ecology[Affiliation]"

Human-driven changes in land cover and use can significantly impact species ants community structures, often leading to a decline in taxonomic diversity or species homogenization. Ant morphology, used as a proxy for ecological function, offers a valuable framework for understanding the effects of anthropogenic disturbances on ant diversity. This study explored the morphological diversity of ant assemblages in agricultural ecosystems and secondary forests in Italy and the Brazilian Amazon, analyzing how these communities are structured and adapted to different environments.

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Rapid growth in bio-logging-the use of animal-borne electronic tags to document the movements, behaviour, physiology and environments of wildlife-offers opportunities to mitigate biodiversity threats and expand digital natural history archives. Here we present a vision to achieve such benefits by accounting for the heterogeneity inherent to bio-logging data and the concerns of those who collect and use them. First, we can enable data integration through standard vocabularies, transfer protocols and aggregation protocols, and drive their wide adoption.

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The development of management strategies for the promotion of sustainable fisheries relies on a deep knowledge of ecological and evolutionary processes driving the diversification and genetic variation of marine organisms. Sustainability strategies are especially relevant for marine species such as the European sardine (Sardina pilchardus), a small pelagic fish with high ecological and socioeconomic importance, especially in Southern Europe, whose stock has declined since 2006, possibly due to environmental factors. Here, we generated sequences for 139 mitochondrial genomes from individuals from 19 different geographical locations across most of the species distribution range, which was used to assess genetic diversity, diversification history and genomic signatures of selection.

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Exploring the Gastrointestinal Microbiome of Eurasian Griffon Vultures () Under Rehabilitation in Portugal and Their Potential Role as Reservoirs of Human and Animal Pathogens.

Vet Sci

December 2024

CIISA-Centre for Interdisciplinary Research in Animal Health, Faculty of Veterinary Medicine, University of Lisbon, Avenida da Universidade Técnica, 1300-477 Lisboa, Portugal.

The Eurasian griffon vulture (), a widely distributed scavenger, plays a crucial role in ecosystem health by consuming decomposing carcasses. Scavengers have adapted to avoid disease from the rotting carrion they feed on, probably through a specialized gut microbiome. This study aimed to characterize the gut microbiome of (n = 8) present in two rehabilitation centers in mainland Portugal and evaluate their potential as reservoirs of pathogens.

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With their unique ecosystems and evolutionary dynamics, small islands offer fascinating contexts to explore animal diversity. Island bats are key players in maintaining ecological balance. However, their populations are threatened worldwide, necessitating comprehensive research and conservation strategies.

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Biochar supplementation affects the microbiome of recycled manure solids for cow bedding: a metagenomic analysis.

J Dairy Sci

December 2024

CIISA-Center for Interdisciplinary Research in Animal Health, Faculty of Veterinary Medicine, University of Lisbon, Lisbon, Portugal; Associate Laboratory for Animal and Veterinary Sciences (AL4AnimalS), Lisbon, Portugal; cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Sciences, University of Lisbon, Lisbon, Portugal.

The widespread use of Recycled Manure Solids (RMS) as cow bedding material is not without risks, since cattle manure may act as a vehicle for pathogenic and antimicrobial resistant bacteria dissemination. Thus, our aim was to evaluate RMS-supplemented with a pine biochar produced in Portugal as a new cow bedding material, since the use of biochar has been shown to have the potential to mitigate the impact of relevant bacterial species when added to animal manure microbiota. Our experimental setup consisted on fresh RMS samples that were collected on a commercial dairy farm and placed in naturally-ventilated containers for a total of 4 groups: 1-non-supplemented RMS; 2-RMS supplemented with 2.

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Landscape influences bat suppression of pine processionary moth: Implications for pest management.

J Environ Manage

December 2024

CE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Departamento de Biologia Animal, Faculdade de Ciências, Universidade de Lisboa, 1749-016, Lisboa, Portugal.

Bats provide important ecosystem services, particularly in agriculture, yet integrating bat management into conservation plans remains challenging. Some landscape features considerably influence bat presence, diversity, and ecosystem service provision. Understanding the relationship between landscape structure, composition, pest suppression, and ecosystem services is crucial.

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From Bayes to Darwin: Evolutionary search as an exaptation from sampling-based Bayesian inference.

J Theor Biol

February 2025

Institute of Evolution, Centre for Ecological Research, 1121 Budapest, Hungary; Center for the Conceptual Foundations of Science, Parmenides Foundation, 82343 Pöcking, Germany. Electronic address:

Building on the algorithmic equivalence between finite population replicator dynamics and particle filtering based approximation of Bayesian inference, we design a computational model to demonstrate the emergence of Darwinian evolution over representational units when collectives of units are selected to infer statistics of high-dimensional combinatorial environments. The non-Darwinian starting point is two units undergoing a few cycles of noisy, selection-dependent information transmission, corresponding to a serial (one comparison per cycle), non-cumulative process without heredity. Selection for accurate Bayesian inference at the collective level induces an adaptive path to the emergence of Darwinian evolution within the collectives, capable of maintaining and iteratively improving upon complex combinatorial information.

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Length-mass relationships of pond macroinvertebrates do not hold between Southern and Northern Europe.

PeerJ

December 2024

cE3c - Centre for Ecology, Evolution and Environmental Changes & CHANGE - Global Change and Sustainability Institute, Faculty of Sciences, University of Lisbon, Lisbon, Portugal.

The lack of reliable data on length-mass relationships, essential to obtain accurate biomass estimates, limits our ability to easily assess secondary production by aquatic invertebrates. In the absence of published equations from similar habitat conditions, authors often borrow equations developed in geographic regions with different climate conditions, which may bias biomass estimates. A literature overview of published size-mass relationships for Portugal and Sweden highlights the need for further data within these biogeographic regions.

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Most animals used in experimentation are small mammals. In the EU, Directive 2010/63/EU regulates the use of laboratory animals for experimental purposes. However, there are few guidelines for the use of wild-sourced animals, which cover permits, experimentation, transport, maintenance, and setting free after experiments.

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New findings of terrestrial arthropods from the Azorean Islands.

Biodivers Data J

November 2024

University of the Azores, cE3c- Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group, CHANGE - Global Change and Sustainability Institute, School of Agricultural and Environmental Sciences, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Azores, Portugal University of the Azores, cE3c- Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group, CHANGE - Global Change and Sustainability Institute, School of Agricultural and Environmental Sciences, Rua Capitão João d´Ávila, Pico da Urze, 9700-042 Angra do Heroísmo, Azores Portugal.

The knowledge on taxonomic diversity of arthropods is key to better understanding the biodiversity patterns and processes and guiding sustainable conservation strategies and practices. In the Azores, terrestrial arthropods are relatively well-inventoried following the publication of comprehensive checklists that have been regularly updated. Nevertheless, every year, new species are found as a result of new arrivals to the Archipelago and from addressing specific taxonomic lacunae.

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Pathogenicity potential of enterococci isolated from a Veterinary Biological Isolation and Containment Unit.

Front Vet Sci

October 2024

CIISA - Centre for Interdisciplinary Research in Animal Health, Faculty of Veterinary Medicine, University of Lisbon, Lisbon, Portugal.

Introduction: are considered an important genus in terms of Hospital-Acquired Infections (HAIs), which means that their characterization regarding resistance and virulence profiles in the hospital environment is of extreme importance. This article addresses this issue through the characterization of enterococci collected from a Veterinary Biological Isolation and Containment Unit (BICU).

Methods: A total of 73 isolates, collected from different surfaces of a Veterinary BICU, were identified as through PCR at species level, after which 34 isolates were selected as representatives using (GTG) fingerprinting.

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Fish community composition in the tropical archipelago of São Tomé and Príncipe.

PLoS One

November 2024

Centre for Ecology and Conservation, Faculty of Environment, Science and Economy, University of Exeter, Penryn, Cornwall, United Kingdom.

Understanding species distribution across habitats and environmental variables is important to inform area-based management. However, observational data are often lacking, particularly from developing countries, hindering effective conservation design. One such data-poor area is the Gulf of Guinea, an understudied and biodiverse region where coastal waters play a critical role in coastal livelihoods.

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New Phytol Derivatives with Increased Cosmeceutical Potential.

Molecules

October 2024

University of the Azores, Faculty of Sciences and Technology, cE3c- Centre for Ecology, Evolution and Environmental Changes, Azorean Biodiversity Group, CHANGE-Global Change and Sustainability Institute, 9500-321 Ponta Delgada, Portugal .

Natural compounds are widely incorporated into cosmetic products for many purposes. Diterpenes often function as fragrances, enhancing the sensory experience of these formulations. However, current trends in cosmetic science aim to develop multifunctional products, where compounds traditionally used for texture or fragrance also possess biological activities that contribute to the product's efficacy.

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Understanding the molecular mechanisms of thermal adaptation is crucial to predict the impacts of global warming. However, there is still a lack of research on the effects of rising temperatures over time and of studies involving different populations from the same species. The present study focuses on these two aspects, which are of great importance in understanding how organisms cope and adapt to ongoing changes in their environment.

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Body size is a key morphological trait that affects physiology and metabolism, as well as other relevant traits such as fertility and mating success. Some evidence points to a trend of shrinking body size with increasing temperature, but this is far from unequivocal. Here, we assess the evolution of body size under a warming environment in experimentally evolved populations from two distinct geographical origins, tested in both ancestral and warming environments.

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Flower Visitation through the Lens: Exploring the Foraging Behaviour of with a Computer Vision-Based Application.

Insects

September 2024

Ce3C-Centre for Ecology, Evolution and Environmental Changes, Azorean Biodiversity Group, CHANGE-Global Change and Sustainability Institute, University of the Azores, 9700-042 Angra do Heroísmo, Portugal.

To understand the processes behind pollinator declines and for the conservation of pollination services, we need to understand fundamental drivers influencing pollinator behaviour. Here, we aimed to elucidate how wild bumblebees interact with three plant species and investigated their foraging behaviour with varying flower densities. We video-recorded in 60 × 60 cm quadrats of , , and in urban areas of Terceira (Azores, Portugal).

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Unveiling Arthropod Responses to Climate Change: A Functional Trait Analysis in Intensive Pastures.

Insects

September 2024

CE3C-Centre for Ecology, Evolution and Environmental Changes, Azorean Biodiversity Group, CHANGE-Global Change and Sustainability Institute, School of Agricultural and Environmental Sciences, University of the Azores, Rua Capitão João d'Ávila, Pico da Urze, 9700-042 Angra do Heroísmo, Portugal.

This study investigates the impact of elevated temperatures on arthropod communities in intensively managed pastures on the volcanic island of Terceira, Azores (Portugal), using a functional trait approach. Open Top Chambers (OTCs) were employed to simulate increased temperatures, and the functional traits of ground dwelling arthropods were analyzed along a small elevation gradient (180-400 m) during winter and summer. Key findings include lower abundances of herbivores, coprophagous organisms, detritivores, and fungivores at high elevations in summer, with predators showing a peak at middle elevations.

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The presence of anthropogenic compounds, including organochlorine pesticides (OCPs) and polychlorinated biphenyls (PCBs), was studied in three salt marshes within the Tagus estuary, Portugal, along an anthropogenic pressure gradient. Results revealed differences in OCPs and PCBs among the marshes, with differing concentration levels. Specifically, one marsh, with surrounding agricultural activity, showed the highest OCP concentrations, while another, with a historical industrial past, exhibited elevated PCB levels.

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Article Synopsis
  • A genomic database encompassing all eukaryotic species on Earth is crucial for scientific advancements, yet most species lack genomic data.
  • The Earth BioGenome Project (EBP) was initiated in 2018 by global scientists to compile high-quality reference genomes for approximately 1.5 million recognized eukaryotic species.
  • The European Reference Genome Atlas (ERGA) launched a Pilot Project to create a decentralized model for reference genome production by testing it on 98 species, providing valuable insights into scalability, equity, and inclusiveness for genomic projects.
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Building a Portuguese coalition for biodiversity genomics.

NPJ Biodivers

September 2024

CE3C-Centre for Ecology, Evolution and Environmental Changes & CHANGE-Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016, Lisbon, Portugal.

Article Synopsis
  • Portugal has a lot of different plants and animals because of its unique geography and history, but these species are in danger from things like climate change and over-exploitation.
  • Researchers in Portugal are working together through a project called Biogenome Portugal to study and document biodiversity, which means looking closely at the genes of different species.
  • The goal is to create a library of genetic information to help protect endangered species and promote conservation efforts in Portugal, especially for unique plants and animals found only there.
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The MOVECLIM - AZORES project: Bryophytes from Terceira Island along an elevation gradient.

Biodivers Data J

September 2024

University of the Azores, cE3c- Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group, CHANGE - Global Change and Sustainability Institute, School of Agricultural and Environmental Sciences, Rua Capitão João d´Ávila, Pico da Urze, 9700-042, Angra do Heroísmo, Azores, Portugal University of the Azores, cE3c- Centre for Ecology, Evolution and Environmental Changes/Azorean Biodiversity Group, CHANGE - Global Change and Sustainability Institute, School of Agricultural and Environmental Sciences, Rua Capitão João d´Ávila, Pico da Urze, 9700-042 Angra do Heroísmo, Azores Portugal.

Background: Systematic studies on the biodiversity of bryophytes along elevational gradients have been conductuted within the native vegetation of the Azores, using the MOVECLIM framework. The primary objective of this study was to inventory the bryophytes present within preserved areas of native vegetation in Terceira Island (Azores). From 25 to 28 September 2012, an inventory of the bryoflora was carried out along an elevational gradient, starting near Serreta lighthouse (38.

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