429 results match your criteria: "and Institute for Advanced Simulation[Affiliation]"
Brain Struct Funct
September 2018
Institute of Neuroscience and Medicine (INM-4), Medical Imaging Physics, Forschungszentrum Jülich GmbH, 52425, Jülich, Germany.
Based on individual circadian cycles and associated cognitive rhythms, humans can be classified via standardised self-reports as being early (EC), late (LC) and intermediate (IC) chronotypes. Alterations in neural cortical structure underlying these chronotype differences have rarely been investigated and are the scope of this study. 16 healthy male ECs, 16 ICs and 16 LCs were measured with a 3 T MAGNETOM TIM TRIO (Siemens, Erlangen) scanner using a magnetization prepared rapid gradient echo sequence.
View Article and Find Full Text PDFACS Nano
July 2018
II. Physikalisches Institut , Universität zu Köln, Cologne D-50937 , Germany.
The moiré of a monolayer of hexagonal boron nitride on Ir(111) is found to be a template for Ir, C, and Au cluster superlattices. Using scanning tunneling microscopy, the cluster structure and epitaxial relation to the substrate, the cluster binding site, the role of defects, as well as the thermal stability of the cluster lattice are investigated. The Ir and C cluster superlattices display a high thermal stability, before they decay by intercalation and Smoluchowski ripening.
View Article and Find Full Text PDFPhys Rev Lett
May 2018
Peter Grünberg Institut and Institute for Advanced Simulation, Forschungszentrum Jülich und JARA, 52425 Jülich, Germany.
We report the direct observation of a theoretically predicted magnetic ground state in a monolayer Fe on Rh(111), which is referred to as an up-up-down-down (↑↑↓↓) double-row-wise antiferromagnetic spin structure, using spin-polarized scanning tunneling microscopy. This exotic phase, which exists in three orientational domains, is revealed by experiments with magnetic probe tips performed in external magnetic fields. It is shown that a hitherto unconsidered four-spin-three-site beyond-Heisenberg interaction distinctly contributes to the spin coupling of atoms with S≥1 spins.
View Article and Find Full Text PDFPhys Rev Lett
May 2018
Institut für Theoretische und Astrophysik, Christian-Albrechts-Universität zu Kiel, 24098 Kiel, Germany.
Using spin-polarized scanning tunneling microscopy and density functional theory we demonstrate the occurrence of a novel type of noncollinear spin structure in Rh/Fe atomic bilayers on Ir(111). We find that higher-order exchange interactions depend sensitively on the stacking sequence. For fcc-Rh/Fe/Ir(111), frustrated exchange interactions are dominant and lead to the formation of a spin spiral ground state with a period of about 1.
View Article and Find Full Text PDFNature
June 2018
Nuclear Science Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA.
The axial coupling of the nucleon, g, is the strength of its coupling to the weak axial current of the standard model of particle physics, in much the same way as the electric charge is the strength of the coupling to the electromagnetic current. This axial coupling dictates the rate at which neutrons decay to protons, the strength of the attractive long-range force between nucleons and other features of nuclear physics. Precision tests of the standard model in nuclear environments require a quantitative understanding of nuclear physics that is rooted in quantum chromodynamics, a pillar of the standard model.
View Article and Find Full Text PDFPhys Rev Lett
May 2018
The Anhui Province Key Laboratory of Condensed Matter Physics at Extreme Conditions, High Magnetic Field Laboratory, Chinese Academy of Sciences and University of Science and Technology of China, Hefei 230026, China.
We report direct evidence of the field-dependent character of the interaction between individual magnetic skyrmions as well as between skyrmions and edges in B20-type FeGe nanostripes observed by means of high-resolution Lorentz transmission electron microscopy. It is shown that above certain critical values of an external magnetic field the character of such long-range skyrmion interactions changes from attraction to repulsion. Experimentally measured equilibrium inter-skyrmion and skyrmion-edge distances as a function of the applied magnetic field shows quantitative agreement with the results of micromagnetic simulations.
View Article and Find Full Text PDFNat Mater
June 2018
Peter Grünberg Institut and Institute for Advanced Simulation, Forschungszentrum Jülich, Jülich, Germany.
Phys Rev Lett
May 2018
Soft Matter Systems Research Group, Center for Simulational Physics, Department of Physics and Astronomy, The University of Georgia, Athens, Georgia 30602, USA.
By means of the principle of minimal sensitivity we generalize the microcanonical inflection-point analysis method by probing derivatives of the microcanonical entropy for signals of transitions in complex systems. A strategy of systematically identifying and locating independent and dependent phase transitions of any order is proposed. The power of the generalized method is demonstrated in applications to the ferromagnetic Ising model and a coarse-grained model for polymer adsorption onto a substrate.
View Article and Find Full Text PDFPhys Rev Lett
April 2018
Peter-Grünberg Institut and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425 Jülich, Germany.
We simulate the dynamics of a single-electron source, modeled as a quantum dot with on-site Coulomb interaction and tunnel coupling to an adjacent lead in time-dependent density-functional theory. Based on this system, we develop a time-nonlocal exchange-correlation potential by exploiting analogies with quantum-transport theory. The time nonlocality manifests itself in a dynamical potential step.
View Article and Find Full Text PDFJ Neurophysiol
August 2018
Institut de Neurosciences de la Timone, Centre National de la Recherche Scientifique-Aix-Marseille Université, UMR7289, Marseille , France.
Large-scale network dynamics in multiple visuomotor areas is of great interest in the study of eye-hand coordination in both human and monkey. To explore this, it is essential to develop a setup that allows for precise tracking of eye and hand movements. It is desirable that it is able to generate mechanical or visual perturbations of hand trajectories so that eye-hand coordination can be studied in a variety of conditions.
View Article and Find Full Text PDFBiol Cybern
April 2018
Institute of Neuroscience and Medicine (INM-6) and Institute for Advanced Simulation (IAS-6), JARA Institute Brain Structure-Function Relationships (INM-10), Jülich Research Centre, Jülich, Germany.
Temporally, precise correlations between simultaneously recorded neurons have been interpreted as signatures of cell assemblies, i.e., groups of neurons that form processing units.
View Article and Find Full Text PDFSci Data
April 2018
Institut de Neurosciences de la Timone (INT), UMR 7289, CNRS-Aix Marseille Université, 13005 Marseille, France.
We publish two electrophysiological datasets recorded in motor cortex of two macaque monkeys during an instructed delayed reach-to-grasp task, using chronically implanted 10-by-10 Utah electrode arrays. We provide a) raw neural signals (sampled at 30 kHz), b) time stamps and spike waveforms of offline sorted single and multi units (93/49 and 156/19 SUA/MUA for the two monkeys, respectively), c) trial events and the monkey's behavior, and d) extensive metadata hierarchically structured via the odML metadata framework (including quality assessment post-processing steps, such as trial rejections). The dataset of one monkey contains a simultaneously saved record of the local field potential (LFP) sampled at 1 kHz.
View Article and Find Full Text PDFNat Nanotechnol
June 2018
Ernst Ruska-Centre for Microscopy and Spectroscopy with Electrons and Peter Grünberg Institute, Forschungszentrum Jülich, Jülich, Germany.
Chiral magnetic skyrmions are nanoscale vortex-like spin textures that form in the presence of an applied magnetic field in ferromagnets that support the Dzyaloshinskii-Moriya interaction (DMI) because of strong spin-orbit coupling and broken inversion symmetry of the crystal. In sharp contrast to other systems that allow for the formation of a variety of two-dimensional (2D) skyrmions, in chiral magnets the presence of the DMI commonly prevents the stability and coexistence of topological excitations of different types . Recently, a new type of localized particle-like object-the chiral bobber (ChB)-was predicted theoretically in such materials .
View Article and Find Full Text PDFBiointerphases
April 2018
Departament d'Enginyeria Química, Universitat Rovira i Virgili, 26 Avinguda dels Països Catalans, 43007 Tarragona, Spain.
Synthetic polymers, nanoparticles, and carbon-based materials have great potential in applications including drug delivery, gene transfection, in vitro and in vivo imaging, and the alteration of biological function. Nature and humans use different design strategies to create nanomaterials: biological objects have emerged from billions of years of evolution and from adaptation to their environment resulting in high levels of structural complexity; in contrast, synthetic nanomaterials result from minimalistic but controlled design options limited by the authors' current understanding of the biological world. This conceptual mismatch makes it challenging to create synthetic nanomaterials that possess desired functions in biological media.
View Article and Find Full Text PDFSci Rep
March 2018
Institute of Neuroscience and Medicine (INM-6) and Institute for Advanced Simulation (IAS-6) and JARA Institute Brain Structure-Function Relationships (INM-10), Jülich Research Centre, Jülich, Germany.
Beta oscillations observed in motor cortical local field potentials (LFPs) recorded on separate electrodes of a multi-electrode array have been shown to exhibit non-zero phase shifts that organize into planar waves. Here, we generalize this concept to additional classes of salient patterns that fully describe the spatial organization of beta oscillations. During a delayed reach-to-grasp task we distinguish planar, synchronized, random, circular, and radial phase patterns in monkey primary motor and dorsal premotor cortices.
View Article and Find Full Text PDFSoft Matter
April 2018
CECAM Centre Européen de Calcul Atomique et Moléculaire, École Polytechnique Fédérale de Lausanne, Batochimie, Avenue Forel 2, 1015 Lausanne, Switzerland and University of Barcelona Institute of Complex Systems (UBICS), Universitat de Barcelona, Barcelona, Spain. and Departament de Física de la Matèria Condensada, Universitat de Barcelona, Martí i Franquès 1, E08028 Barcelona, Spain.
We present a comprehensive computational study of the collective behavior emerging from the competition between self-propulsion, excluded volume interactions and velocity-alignment in a two-dimensional model of active particles. We consider an extension of the active brownian particles model where the self-propulsion direction of the particles aligns with the one of their neighbors. We analyze the onset of collective motion (flocking) in a low-density regime (10% surface area) and show that it is mainly controlled by the strength of velocity-alignment interactions: the competition between self-propulsion and crowding effects plays a minor role in the emergence of flocking.
View Article and Find Full Text PDFJ Chem Phys
March 2018
Peter-Grünberg Institut and Institute for Advanced Simulation, Forschungszentrum Jülich, D-52425 Jülich, Germany.
We investigate the structure of the one-body reduced density matrix of three electron systems, i.e., doublet and quadruplet spin configurations, corresponding to the smallest interacting system with an open-shell ground state.
View Article and Find Full Text PDFNanoscale
April 2018
Theoretical Soft Matter and Biophysics, Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich, D-52425 Jülich, Germany.
Nanoparticles in biological systems encounter lipid-bilayer membranes as barriers. They interact with plasma membranes, membranous organelles, such as the endoplasmic reticulum and the Golgi apparatus, the nucleus, and intracellular and extracellular vesicles, such as autophagosomes, lysosomes, and exosomes. Extracellular vesicles have recently attracted particular attention, as they are involved in the transmission of biological signals and as regulators for biological processes.
View Article and Find Full Text PDFFront Neuroinform
February 2018
Department of Computational Science and Technology, School of Computer Science and Communication, KTH Royal Institute of Technology, Stockholm, Sweden.
State-of-the-art software tools for neuronal network simulations scale to the largest computing systems available today and enable investigations of large-scale networks of up to 10 % of the human cortex at a resolution of individual neurons and synapses. Due to an upper limit on the number of incoming connections of a single neuron, network connectivity becomes extremely sparse at this scale. To manage computational costs, simulation software ultimately targeting the brain scale needs to fully exploit this sparsity.
View Article and Find Full Text PDFPhys Rev Lett
February 2018
Donostia International Physics Center (DIPC), Manuel Lardizabal Pasealekua 4, 20018 Donostia/San Sebastián, Basque Country, Spain.
The recent claim of having produced metallic hydrogen in the laboratory relies on measurements of optical spectra. Here, we present first-principles calculations of the reflectivity of hydrogen between 400 and 600 GPa in the I4_{1}/amd crystal structure, the one predicted at these pressures, based on both time-dependent density functional and Eliashberg theories, thus, covering the optical properties from the infrared to the ultraviolet regimes. Our results show that atomic hydrogen displays an interband plasmon at around 6 eV that abruptly suppresses the reflectivity, while the large superconducting gap energy yields a sharp decrease of the reflectivity in the infrared region approximately at 120 meV.
View Article and Find Full Text PDFSci Rep
February 2018
Department of Applied Physics, School of Engineering Sciences, KTH Royal Institute of Technology, Electrum 229, SE-16440, Kista, Sweden.
The skyrmion racetrack is a promising concept for future information technology. There, binary bits are carried by nanoscale spin swirls-skyrmions-driven along magnetic strips. Stability of the skyrmions is a critical issue for realising this technology.
View Article and Find Full Text PDFJ R Soc Interface
February 2018
Theoretical Soft Matter and Biophysics, Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich and JARA, 52425 Jülich, Germany
Nutrient gradients and limitations play a pivotal role in the life of all microbes, both in their natural habitat as well as in artificial, microfluidic systems. Spatial concentration gradients of nutrients in densely packed cell configurations may locally affect the bacterial growth leading to heterogeneous micropopulations. A detailed understanding and quantitative modelling of cellular behaviour under nutrient limitations is thus highly desirable.
View Article and Find Full Text PDFFront Neuroinform
January 2018
Aachen Institute for Advanced Study in Computational Engineering Science, RWTH Aachen University, Aachen, Germany.
Spiking neuronal networks are usually simulated with one of three main schemes: the classical time-driven and event-driven schemes, and the more recent hybrid scheme. All three schemes evolve the state of a neuron through a series of checkpoints: equally spaced in the first scheme and determined neuron-wise by spike events in the latter two. The time-driven and the hybrid scheme determine whether the membrane potential of a neuron crosses a threshold at the end of the time interval between consecutive checkpoints.
View Article and Find Full Text PDFPhys Rev E
November 2017
Department of Chemical Physics, Weizmann Institute of Science, Rehovot 76100, Israel.
We study the force that noninteracting pointlike active particles apply to a symmetric inert object in the presence of a gradient of activity and particle sources and sinks. We consider two simple patterns of sources and sinks that are common in biological systems. We analytically solve a one-dimensional model designed to emulate higher-dimensional systems, and study a two-dimensional model by numerical simulations.
View Article and Find Full Text PDFPhys Rev E
December 2017
Institute of Complex Systems and Institute for Advanced Simulation, Forschungszentrum Jülich, 52425 Jülich, Germany.
Hydrodynamic fluctuations in simple fluids under shear flow are demonstrated to be spatially correlated, in contrast to the fluctuations at equilibrium, using mesoscopic hydrodynamic simulations. The simulation results for the equal-time hydrodynamic correlations in a multiparticle collision dynamics (MPC) fluid in shear flow are compared with the explicit expressions obtained from fluctuating hydrodynamics calculations. For large wave vectors k, the nonequilibrium contributions to transverse and longitudinal velocity correlations decay as k^{-4} for wave vectors along the flow direction and as k^{-2} for the off-flow directions.
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