14 results match your criteria: "and Friedrich Miescher Institute[Affiliation]"
Annu Rev Neurosci
January 2025
1Department of Neuroscience, Karolinska Institutet, Stockholm, Sweden; email:
Locomotion, like all behaviors, possesses an inherent flexibility that allows for the scaling of movement kinematic features, such as speed and vigor, in response to an ever-changing external world and internal drives. This flexibility is embedded in the organization of the spinal locomotor circuits, which encode and decode commands from the brainstem and proprioceptive feedback. This review highlights our current understanding of the modular organization of these locomotor circuits and how this modularity endows them with intrinsic mechanisms to adjust speed and vigor, thereby contributing to the flexibility of locomotor movements.
View Article and Find Full Text PDFNeural Comput
March 2021
Centre for Neural Circuits and Behaviour, University of Oxford, Oxford OX1 3SR, U.K., and Institute for Science and Technology, 3400 Klosterneuburg, Austria,
Brains process information in spiking neural networks. Their intricate connections shape the diverse functions these networks perform. Yet how network connectivity relates to function is poorly understood, and the functional capabilities of models of spiking networks are still rudimentary.
View Article and Find Full Text PDFMol Cell
January 2021
Institut de Génétique Humaine, CNRS, Université de Montpellier, Equipe Labéllisée Ligue contre le Cancer, 34396 Montpellier, France; University of Basel and Friedrich Miescher Institute for Biomedical Research, Faculty of Natural Sciences, Klingelbergstrasse 50, 4056 Basel, Switzerland. Electronic address:
Mre11-Rad50-Xrs2 (MRX) is a highly conserved complex with key roles in various aspects of DNA repair. Here, we report a new function for MRX in limiting transcription in budding yeast. We show that MRX interacts physically and colocalizes on chromatin with the transcriptional co-regulator Mediator.
View Article and Find Full Text PDFRadiol Artif Intell
March 2020
Department of Informatics (A.S., B.H.M.) and Department of Neuroradiology, School of Medicine (A.S., A.V., J.S.K.), Technical University of Munich; Department of Diagnostic and Interventional Neuroradiology, Klinikum Rechts der Isar, Ismaninger Str 22, 81675 Munich, Germany (A.S.); and Friedrich Miescher Institute for Biomedical Engineering, Basel, Switzerland (M.R.).
Purpose: To use and test a labeling algorithm that operates on two-dimensional reformations, rather than three-dimensional data to locate and identify vertebrae.
Materials And Methods: The authors improved the Btrfly Net, a fully convolutional network architecture described by Sekuboyina et al, which works on sagittal and coronal maximum intensity projections (MIPs) and augmented it with two additional components: spine localization and adversarial a priori learning. Furthermore, two variants of adversarial training schemes that incorporated the anatomic a priori knowledge into the Btrfly Net were explored.
J Neurosci
October 2016
Department of Neuroscience and
Unlabelled: Axon-Schwann cell interactions are crucial for the development, function, and repair of the peripheral nervous system, but mechanisms underlying communication between axons and nonmyelinating Schwann cells are unclear. Here, we show that ER81 is functionally required in a subset of mouse RET mechanosensory neurons for formation of Pacinian corpuscles, which are composed of a single myelinated axon and multiple layers of nonmyelinating Schwann cells, and Ret is required for the maintenance of Er81 expression. Interestingly, Er81 mutants have normal myelination but exhibit deficient interactions between axons and corpuscle-forming nonmyelinating Schwann cells.
View Article and Find Full Text PDFCurr Biol
April 2016
Biozentrum, University of Basel, 4056 Basel and Friedrich Miescher Institute, 4058 Basel, Switzerland. Electronic address:
A recent study has functionally disentangled the hitherto enigmatic mesencephalic locomotor region of the brain on the basis of cell type diversity and identified differential upstream regulatory pathways.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
November 2014
Howard Hughes Medical Institute and Departments of Neuroscience, Biochemistry and Molecular Biophysics, Kavli Institute of Brain Science, Columbia University, New York, NY 10032;
Mammalian locomotor programs are thought to be directed by the actions of spinal interneuron circuits collectively referred to as "central pattern generators." The contribution of proprioceptive sensory feedback to the coordination of locomotor activity remains less clear. We have analyzed changes in mouse locomotor pattern under conditions in which proprioceptive feedback is attenuated genetically and biomechanically.
View Article and Find Full Text PDFNucleic Acids Res
April 2014
Department of Biomedicine, University of Basel, 4058 Basel, Switzerland and Friedrich Miescher Institute for Biomedical Research, Maulbeerstrasse 66, 4058 Basel, Switzerland.
Various topological constraints at the ribosomal DNA (rDNA) locus impose an extra challenge for transcription and DNA replication, generating constant torsional DNA stress. The topoisomerase Top1 is known to release such torsion by single-strand nicking and re-ligation in a process involving transient covalent Top1 cleavage complexes (Top1cc) with the nicked DNA. Here we show that Top1ccs, despite their usually transient nature, are specifically targeted to and stabilized at the ribosomal replication fork barrier (rRFB) of budding yeast, establishing a link with previously reported Top1 controlled nicks.
View Article and Find Full Text PDFCancer Res
March 2014
Authors' Affiliations: Department of Biomedicine, University of Basel; and Friedrich Miescher Institute for Biomedical Research, Basel, Switzerland.
An epithelial-mesenchymal transition (EMT) underlies malignant tumor progression and metastatic spread by enabling cancer cells to depart from the primary tumor, invade surrounding tissue, and disseminate to distant organs. EMT also enriches for cancer stem cells (CSC) and increases the capacity of cancer cells to initiate and propagate tumors upon transplantation into immune-deficient mice, a major hallmark of CSCs. However, the molecular mechanisms promoting the tumorigenicity of cancer cells undergoing an EMT and of CSCs have remained widely elusive.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
August 2009
Biozentrum, Department of Cell Biology, University of Basel and Friedrich Miescher Institute for Biomedical Research, CH-4058 Basel, Switzerland.
Spinal motor neurons are specified to innervate different muscle targets through combinatorial programs of transcription factor expression. Whether transcriptional programs also establish finer aspects of motor neuron subtype identity, notably the prominent functional distinction between alpha and gamma motor neurons, remains unclear. In this study, we identify DNA binding proteins with complementary expression profiles in alpha and gamma motor neurons, providing evidence for molecular distinctions in these two motor neuron subtypes.
View Article and Find Full Text PDFJ Clin Invest
August 2005
Biozentrum, Department of Cell Biology, University of Basel, and Friedrich Miescher Institute, Basel, Switzerland.
Iron homeostasis plays a critical role in many physiological processes, notably synthesis of heme proteins. Dietary iron sensing and inflammation converge in the control of iron absorption and retention by regulating the expression of hepcidin, a regulator of the iron exporter ferroportin. Human mutations in the glycosylphosphatidylinositol-anchored protein hemojuvelin (HJV; also known as RGMc and HFE2) cause juvenile hemochromatosis, a severe iron overload disease, but the way in which HJV intersects with the iron regulatory network has been unclear.
View Article and Find Full Text PDFJ Biol Chem
November 2004
ETH-Zürich, Institute of Biochemistry, Schafmattstrasse 18, Zürich 8093, Switzerland and Friedrich Miescher Institute, Basel 4002, Switzerland.
The Rho-GTPase Cdc42 is important for the establishment and maintenance of epithelial polarity. Signaling from Cdc42 is propagated via its effector molecules that specifically bind to Cdc42 in the GTP-bound form. The cell-cell contact regulator and actin-binding protein IQGAP1 is described as effector of Cdc42 and Rac.
View Article and Find Full Text PDFTrends Neurosci
August 2004
Biozentrum, Department of Cell Biology, University of Basel, Klingelbergstrasse 70, 4056 Basel, Switzerland, and Friedrich Miescher Institute, Maulbeerstrasse 66, 4058 Basel, Switzerland.
Assembly of neuronal circuits is controlled by the sequential acquisition of neuronal subpopulation-specific identities at progressive developmental steps. Whereas neuronal features involved in initial phases of differentiation are already established at cell-cycle exit, recent findings, based mainly on work in the peripheral nervous system, suggest that the timely integration of signals encountered en route to targets and from the target region itself is essential to control late steps in connectivity. As neurons project towards their targets they require target-derived signals to establish mature axonal projections and acquire neuronal traits such as the expression of distinct combinations of neurotransmitters.
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