A thousand-genome panel retraces the global spread and adaptation of a major fungal crop pathogen.

Human activity impacts the evolutionary trajectories of many species worldwide. Global trade of agricultural goods contributes to the dispersal of pathogens reshaping their genetic makeup and providing opportunities for virulence gains. Understanding how pathogens surmount control strategies and cope with new climates is crucial to predicting the future impact of crop pathogens.

Development of a cost-effective, morphology-preserving method for DNA isolation from bulk invertebrate trap catches: Tephritid fruit flies as an exemplar.

Insect identification and preservation of voucher specimens is integral to pest diagnostic and surveillance activities; yet bulk-trapped insects are a diagnostic challenge due to high catch numbers and the susceptibility of samples to environmental damage. Many insect trap catches rely on examination of morphological characters for species identifications, which is a time consuming and highly skilled task, hence there is a need for more efficient molecular approaches. Many bulk DNA extraction methods require destructive sampling of specimens, resulting in damaged, or fully destroyed, voucher specimens.

Silver lining to a climate crisis in multiple prospects for alleviating crop waterlogging under future climates.

Extreme weather events threaten food security, yet global assessments of impacts caused by crop waterlogging are rare. Here we first develop a paradigm that distils common stress patterns across environments, genotypes and climate horizons. Second, we embed improved process-based understanding into a farming systems model to discern changes in global crop waterlogging under future climates.

Genome-wide association and RNA-seq analyses identify loci for pod orientation in rapeseed ().

Spatial distribution and orientation of pods on the main raceme (stem) and branches could affect rapeseed yield. However, genomic regions underlying the pod orientation were not described in species. Here, we determined the extent of genetic variation in pod orientation, described as the angles of pedicel on raceme (APR) and angles of the pod on pedicel (APP) among 136 rapeseed accessions grown across three environments of the upper, middle and lower Yangtze River in China.

High-pressure processing and modified atmosphere packaging combinations for the improvement of dark, firm, and dry beef quality and shelf-life.

This study investigated the effects of high-pressure processing (HPP) and modified atmosphere packaging (MAP) on 'dark, firm, and dry' (DFD) beef. To optimize the HPP, beef steaks (n = 180) were first processed at different pressures (0.1, 200, 300, 400, 500 MPa).

Iris lactea var. chinensis plant drought tolerance depends on the response of proline metabolism, transcription factors, transporters and the ROS-scavenging system.

Background: Iris lactea var. chinensis, a perennial herbaceous species, is widely distributed and has good drought tolerance traits. However, there is little information in public databases concerning this herb, so it is difficult to understand the mechanism underlying its drought tolerance.

Extreme fire weather is the major driver of severe bushfires in southeast Australia.

In Australia, the proportion of forest area that burns in a typical fire season is less than for other vegetation types. However, the 2019-2020 austral spring-summer was an exception, with over four times the previous maximum area burnt in southeast Australian temperate forests. Temperate forest fires have extensive socio-economic, human health, greenhouse gas emissions, and biodiversity impacts due to high fire intensities.

Relationships between denitrification rates and functional gene abundance in a wetland: The roles of single- and multiple-species plant communities.

Wetland soil denitrification removes excess inorganic nitrogen (N) and prevents eutrophication in aquatic ecosystems. Wetland plants have been considered the key factors determining the capacity of wetland soil denitrification to remove N pollutants in aquatic ecosystems. However, the influences of various plant communities on wetland soil denitrification remain unknown.

The retail color characteristics of vacuum-packaged beef m. longissimus lumborum following long-term superchilled storage.

This study investigated whether beef m. longissimus lumborum (LL) can be merchandised under retail conditions, following long-term superchilled storage (-1 °C). At 24 h post-mortem, the LL from left side of beef carcasses (n = 5) were fabricated into vacuum packaged beef thick-cuts, and then stored for 0, 2, 4, 8, 12, 16, or 20 weeks under superchilled conditions (-1 °C).

Nutrient digestibility, rumen parameters, and (cannabinoid) residues in sheep fed a pelleted diet containing green hemp ( L.) biomass.

The feeding value for ruminants of green hemp biomass, from the low Δ-tetrahydrocannabinol (Δ-THC) variety of L., is unknown. Twelve Merino ewes were individually penned and randomly allocated on a stratified liveweight basis to one of two pelleted dietary treatments, control (0% hemp, = 6) or hemp (42% green hemp biomass, = 6) that delivered a diet meeting the nutrient requirements of the animals.

Multi-stage resistance to revealed by GWAS in an Australian bread wheat diversity panel.

Septoria tritici blotch (STB) has been ranked the third most important wheat disease in the world, threatening a large area of wheat production. Although major genes play an important role in the protection against infection, the lifespan of their resistance unfortunately is very short in modern wheat production systems. Combinations of quantitative resistance with minor effects, therefore, are believed to have prolonged and more durable resistance to .

Influence of low-energy electron beam irradiation on the quality and shelf-life of vacuum-packaged pork stored under chilled and superchilled conditions.

This study aimed to explore the effects of different levels (0, 8, and 12 kGy) of low-energy electron beam (LEEB; 0.2 MeV) on the quality and shelf-life of vacuum-packaged pork stored under chilled and superchilled conditions for 30 days. LEEB irradiation promoted lipid and protein oxidation, regardless of the levels used.

Advancing understanding of oat phenology for crop adaptation.

Oat is an annual cereal grown for forage, fodder and grain. Seasonal flowering behaviour, or phenology, is a key contributor to the success of oat as a crop. As a species, oat is a vernalization-responsive long-day plant that flowers after winter as days lengthen in spring.

Assessing impacts of global climate change on water and food security in the black soil region of Northeast China using an improved SWAT-CO model.

Future climate change may have substantial impacts on both water resources and food security in China's black soil region. The Liao River Basin (LRB; 220,000 km) is representative of the main black soil area, making it ideal for studying climate change effects on black soil. In this study, the Soil and Water Assessment Tool (SWAT) model was first initialized for the LRB.

DNA Barcoding of Culicoides Latreille (Diptera: Ceratopogonidae) From Thailand Reveals Taxonomic Inconsistencies and Novel Diversity Among Reported Sequences.

Recent focus on Culicoides species diversity in Thailand was prompted by a need to identify vectors responsible for the transmission of African Horse Sickness in that country. To assist rapid genetic identification of species, we sampled mitochondrial cytochrome c oxidase subunit I (COI) DNA barcodes (N = 78) from 40 species of Culicoides biting midge from Thailand, including 17 species for which DNA barcodes were previously unavailable. The DNA barcodes were assigned to 39 Barcode Identification Numbers (BINs) representing terminal genetic clusters at the Barcode of Life Data systems (BOLD).

Climate Change Impact on Yield and Water Use of Rice-Wheat Rotation System in the Huang-Huai-Hai Plain, China.

Global climate change has had a significant impact on crop production and agricultural water use. Investigating different future climate scenarios and their possible impacts on crop production and water consumption is critical for proposing effective responses to climate change. In this study, based on daily downscaled climate data from 22 Global Climate Models (GCMs) provided by Coupled Model Intercomparison Project Phase 6 (CMIP6), we applied the well-validated Agricultural Production Systems sIMulator (APSIM) to simulate crop phenology, yield, and water use of the rice-wheat rotation at four representative stations (including Hefei and Shouxian stations in Anhui province and Kunshan and Xuzhou stations in Jiangsu province) across the Huang-Huai-Hai Plain, China during the 2041-2070 period (2050s) under four Shared Socioeconomic Pathways (i.

Climate-smart planting for potato to balance economic return and environmental impact across China.

Potato production plays an important role in safeguarding food security in China since the central government implemented the 'Potato-as-Staple-Food' policy in 2015. However, a key challenge facing China's potato production is to realize a tradeoff between economic return and environmental impact. Effective strategies for reducing carbon emission without compromising potato yield remain to be developed.

Complete chloroplast genome of Serrated Tussock, (Poaceae: Stipeae).

is one of the most serious weed species in Australia. It is often confused with other and stipoid species, especially at the young seedling stage, adding another layer of complexity in effective weed management. We report here the complete chloroplast genome of (137,568 bp, GenBank accession number KX792500.

Two new parasitic copepods of the family Sphyriidae (Copepoda: Siphonostomatoida) from Australian elasmobranchs.

Two new species of the genus Tripaphylus Richiardi in Anonymous, 1878 (family Sphyriidae) are described from elasmobranch hosts caught as bycatch within the Demersal and Timor Reef Fisheries which operate in the Northern Territory exclusive economic zone. Tripaphylus squidwardi n. sp.

Optimal Strategy on Radiation Estimation for Calculating Universal Thermal Climate Index in Tourism Cities of China.

The Universal Thermal Climate Index (UTCI) is believed to be a very powerful tool for providing information on human thermal perception in the domain of public health, but the solar radiation as an input variable is difficult to access. Thus, this study aimed to explore the optimal strategy on estimation of solar radiation to increase the accuracy in UTCI calculation, and to identify the spatial and temporal variation in UTCI over China. With daily meteorological data collected in 35 tourism cities in China from 1961 to 2020, two sunshine-based Angstrom and Ogelman models, and two temperature-based Bristow and Hargreaves models, together with neural network and support vector machine-learning methods, were tested against radiation measurements.

Parasites of Selected Freshwater Snails in the Eastern Murray Darling Basin, Australia.

Aquatic snails serve an important role in the ecosystem. They also play an essential role in the life cycle of many parasites as hosts and may pose risks to animal and human health. In Australia, the role of snails in the transmission of parasites of livestock is well studied.

Characterization of tongue worms, Linguatula spp. (Pentastomida) in Romania, with the first record of an unknown adult Linguatula from roe deer (Capreolus capreolus Linnaeus).

Specimens of the pentastomid parasite, Linguatula serrata, have been reported from several animals in Romania, including some domestic dogs translocated to other parts of Europe. In this study, gray wolves (Canis lupus, n = 80), golden jackals (C. aureus, n = 115), red foxes (Vulpes vulpes, n = 236), and roe deer (Capreolus capreolus, n = 1) were examined for pentastomes.

Genome-Wide Association Analyses Track Genomic Regions for Resistance to in Australian Chickpea Breeding Germplasm.

Ascochyta blight (AB), caused by a necrotrophic fungus, (syn. ) has the potential to destroy the chickpea industry worldwide, due to limited sources of genetic resistance in the cultivated gene pool, high evolutionary potential of the pathogen and challenges with integrated disease management. Therefore, the deployment of stable genetic resistance in new cultivars could provide an effective disease control strategy.

Deficit Irrigation at Pre-Anthesis Can Balance Wheat Yield and Water Use Efficiency under Future Climate Change in North China Plain.

Background: Deficit irrigation (DI) is a feasible strategy to enhance crop WUE and also has significant compensation effects on yield. Previous studies have found that DI has great potential to maintain crop production as full irrigation (FI) does. Therefore, adopting DI to improve crop production and safeguard groundwater resources is of great importance in water scarce regions, e.