108 results match your criteria: "V. P. Kukhar Institute of Bioorganic Chemistry and Petrochemistry[Affiliation]"

Brassinosteroids (BRs) are plant hormones of steroid nature, regulating various developmental and adaptive processes. The perception, transport, and signaling of BRs are actively studied nowadays via a wide range of biochemical and genetic tools. However, most of the knowledge about BRs intracellular localization and turnover relies on the visualization of the receptors or cellular compartments using dyes or fluorescent protein fusions.

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Cellulose is a widespread macromolecule in terrestrial environments and a major architectural component of microbial biofilm. Therefore, cellulose might be considered a biosignature that indicates the presence of microbial life. We present, for the first time, characteristics of bacterial cellulose after long-term spaceflight and exposure to simuled Mars-like stressors.

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Online Chemical Modeling Environment (OCHEM) was used for QSAR analysis of a set of ionic liquids (ILs) tested against multi-drug resistant (MDR) clinical isolate and strains. The predictive accuracy of regression models has coefficient of determination q = 0.66 - 0.

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Unlabelled: The marine sponges of the order Verongiida (Demospongiae: Porifera) have survived on our planet for more than 500 million years due to the presence of a unique strategy of chemical protection by biosynthesis of more than 300 derivatives of biologically active bromotyrosines as secondary metabolites. These compounds are synthesized within spherulocytes, highly specialized cells located within chitinous skeletal fibers of these sponges from where they can be extruded in the sea water and form protective space against pathogenic viruses, bacteria and other predators. This chitin is an example of unique biomaterial as source of substances with antibiotic properties.

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A synthetic strategy to fused bicyclic piperidines-building blocks for medicinal chemistry-is developed. The key step was an intramolecular [2 + 2]-photocyclization. The photochemical step was performed on a gram scale.

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Natural products as well as their derivatives play a significant role in the discovery of new biologically active compounds in the different areas of our life especially in the field of medicine. The synthesis of compounds produced from natural products including cytisine is one approach for the wider use of natural substances in the development of new drugs. QSAR modeling was used to predict and select of biologically active cytisine-containing 1,3-oxazoles.

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Correction: Pokotylo, I., et al. Deciphering the Binding of Salicylic Acid to Chloroplastic GAPDH-A1. 2020, , 4678.

Int J Mol Sci

October 2020

IEES-Paris (UMR_7618)-Institut D'écologie et des Sciences de L'environnement de Paris, CNRS UMR 7583, Université Paris-Est Créteil, Sorbonne Université, F-94010 Paris, France.

The authors wish to make the following correction to their published paper [...

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Deciphering the Binding of Salicylic Acid to Chloroplastic GAPDH-A1.

Int J Mol Sci

June 2020

IEES-Paris (UMR_7618) - Institut D'écologie et des Sciences de L'environnement de Paris, CNRS UMR 7583, Université Paris-Est Créteil, Sorbonne Université, F-94010 Paris, France.

Salicylic acid (SA) has an essential role in the responses of plants to pathogens. SA initiates defence signalling via binding to proteins. NPR1 is a transcriptional -activator and a key target of SA binding.

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A new effective method for the construction of nitrogen heterocycles incorporating endocyclic pharmacophore sulfonamide fragment, based on the use of easy accessible -(chlorosulfonyl)imidoyl chloride, CClC(Cl)=NSOCl (), has been developed. Thus, a reaction of as bielectrophilic 1,3-C-N-S reagent with benzylamines that act as 1,4-N-C-C-C binucleophiles, affords respective 1,2,4-benzothiadiazepine-1,1-dioxides. On the other hand, reacts with alkenyl amines with the formation of respective -alkenyl amidines undergoing Lewis acids initiated intramolecular cyclization to afford derivatives of 1,2,4-thiadiazines and 1,2,4-thiadiazocines bearing a halomethyl group able for further functionalization.

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Marine demosponges of the Verongiida order are considered a gold-mine for bioinspired materials science and marine pharmacology. The aim of this work was to simultaneously isolate selected bromotyrosines and unique chitinous structures from A. aerophoba and to propose these molecules and biomaterials for possible application as antibacterial and antitumor compounds and as ready-to-use scaffolds for cultivation of cardiomyocytes, respectively.

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QSAR analysis of a set of previously synthesized phosphonium ionic liquids (PILs) tested against Gram-negative multidrug-resistant clinical isolate Acinetobacter baumannii was done using the Online Chemical Modeling Environment (OCHEM). To overcome the problem of overfitting due to descriptor selection, fivefold cross-validation with variable selection in each step of the model development was applied. The predictive ability of the classification models was tested by cross-validation, giving balanced accuracies (BA) of 76%-82%.

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Article Synopsis
  • The study focuses on glycogen storage diseases (GSDs) characterized by excessive glycogen accumulation, suggesting that reducing this accumulation could be a viable treatment method.
  • Researchers identified a first-in-class inhibitor for a key enzyme, glycogen synthase (GS), which plays a significant role in glycogen production, and characterized it using advanced techniques like fluorescence polarization and X-ray crystallography.
  • They further developed around 500 analogs based on this inhibitor, ultimately discovering a more potent compound that significantly inhibits human GS, showing promise for drug development in treating GSDs linked to glycogen overaccumulation.
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Spread of multidrug-resistant Escherichia coli clinical isolates is a main problem in the treatment of infectious diseases. Therefore, the modern scientific approaches in decision this problem require not only a prevention strategy, but also the development of new effective inhibitory compounds with selective molecular mechanism of action and low toxicity. The goal of this work is to identify more potent molecules active against E.

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Deoxofluorination of (Hetero)aromatic Acids.

J Org Chem

March 2020

Enamine Ltd., Chervonotkatska 78, Kyiv 02094, Ukraine.

Diverse trifluoromethyl-substituted compounds were synthesized by deoxofluorination of cinnamic and (hetero)aromatic carboxylic acids with sulfur tetrafluoride. The obtained products were used as starting materials in the preparation of novel fluorinated amino acids, anilines, and aliphatic amines - valuable building blocks for medicinal chemistry and agrochemistry.

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The phytohormone salicylic acid (SA) has a crucial role in plant physiology. Its role is best described in the context of plant response to pathogen attack. During infection, SA is rapidly accumulated throughout the green tissues and is important for both local and systemic defences.

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A practical method for the synthesis of functionalized aliphatic trifluoromethyl-substituted derivatives from aliphatic acids is developed. The transformation proceeds with sulfur tetrafluoride in the presence of water as a key additive. Compared to previous methods, the reaction gives products with full retention of stereo- and absolute configuration of chiral centers.

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Naturally occurring three-dimensional (3D) biopolymer-based matrices that can be used in different biomedical applications are sustainable alternatives to various artificial 3D materials. For this purpose, chitin-based structures from marine sponges are very promising substitutes. Marine sponges from the order Verongiida (class Demospongiae) are typical examples of demosponges with well-developed chitinous skeletons.

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Marine sponges remain representative of a unique source of renewable biological materials. The demosponges of the family Ianthellidae possess chitin-based skeletons with high biomimetic potential. These three-dimensional (3D) constructs can potentially be used in tissue engineering and regenerative medicine.

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Sorption properties of polydopamine (PDA) for uranium and plutonium from an aqueous environment are reported at three different pH values (2, 4 and 6.5-7). In addition to deionized (DI) water, artificial groundwater (GW) and seawater (SW) were used with U uptake close to 100% in each case.

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Salicylic Acid Binding Proteins (SABPs): The Hidden Forefront of Salicylic Acid Signalling.

Int J Mol Sci

September 2019

Université Paris-Est, UPEC, Institut d'Ecologie et des Sciences de l'Environnement de Paris, 94010 Créteil, France.

Salicylic acid (SA) is a phytohormone that plays important roles in many aspects of plant life, notably in plant defenses against pathogens. Key mechanisms of SA signal transduction pathways have now been uncovered. Even though details are still missing, we understand how SA production is regulated and which molecular machinery is implicated in the control of downstream transcriptional responses.

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New 2-Oxoimidazolidine Derivatives: Design, Synthesis and Evaluation of Anti-BK Virus Activities in Vitro.

Chem Biodivers

October 2019

Department of Chemistry of Bioactive Nitrogen-Containing Heterocyclic Bases, V. P. Kukhar Institute of Bioorganic Chemistry and Petrochemistry, NAS of Ukraine, 1, Murmanska Str., Kyiv, 02094, Ukraine.

Article Synopsis
  • - A new series of 2-oxoimidazolidine derivatives were created and tested for their antiviral effects against BK human polyomavirus type 1 (BKPyV) in laboratory settings.
  • - Two specific compounds, 5 and 4, showed moderate antiviral activity similar to the established drug Cidofovir, with effective concentrations around 5.4 and 5.5 μm, respectively.
  • - While compound 5 had comparable cytotoxicity and selectivity index to Cidofovir, compound 4 was more toxic, leading to a lower selectivity index, indicating that these compounds could be further explored as potential anti-BKPyV treatments.
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Currently, polyaniline (PANI) is considered as a promising polymer that can be used in biosensors, drug delivery systems, bioelectronics, etc. Its biocompatibility can be strongly improved by using dopants with biofunctionality. This study reveals the protonation/doping of PANI by fluorinated analogs of natural amino acids, namely, α,α-difluoro-β-amino acids (DFAAs) with alkyl and aromatic tails in -methylpyrrolidone solutions.

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One-Pot Parallel Synthesis of 5-(Dialkylamino)tetrazoles.

ACS Comb Sci

September 2019

Enamine, Ltd. , Chervonotkatska Street 78 , Kyiv 02094 , Ukraine , www.enamine.net.

Two protocols for the combinatorial synthesis of 5-(dialkylamino)tetrazoles were developed. The best success rate (67%) was shown by the method that used primary and secondary amines, 2,2,2-trifluoroethylthiocarbamate, and sodium azide as the starting reagents. The key steps included the formation of unsymmetrical thiourea, subsequent alkylation with 1,3-propane sultone and cyclization with azide anion.

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Brassinosteroids application induces phosphatidic acid production and modify antioxidant enzymes activity in tobacco in calcium-dependent manner.

Steroids

April 2021

Department of the Molecular Mechanisms of Cell Metabolism Regulation, V.P. Kukhar Institute of Bioorganic Chemistry and Petrochemistry, The National Academy of Sciences of Ukraine, 02660, Murmanska str. 1, Kyiv, Ukraine. Electronic address:

Brassinosteroids (BRs) are steroid hormones regulating various aspects of plant metabolism, including growth, development and stress responses. However, little is known about the mechanism of their impact on antioxidant systems and phospholipid turnover. Using tobacco plants overexpressing H/Cavacuolar Arabidopsis antiporter CAX1, we showed the role of Ca ion balance in the reactive oxygen species production and rapid phosphatidic acid accumulation induced by exogenous BR.

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One-Pot Synthesis of B-Ring Ortho-Hydroxylated Sappanin-Type Homoisoflavonoids.

J Org Chem

June 2019

Department of Chemistry of Bioactive Nitrogen-Containing Heterocyclic Bases, V. P. Kukhar Institute of Bioorganic Chemistry and Petrochemistry, National Academy of Science of Ukraine , Kyiv 02094 , Ukraine.

A reliable method for the synthesis of B-ring hydroxylated homoisoflavonoids and 3-hetarylmethyl chromones has been developed. The method involves an initial oxa-Diels-Alder reaction of ortho-quinone methides generated from aryl/hetaryl-substituted ortho-( N, N-dimethylaminomethyl)phenols with (2 E)-3-( N, N-dimethylamino)-1-(2-hydroxyphenyl)prop-2-en-1-ones and the subsequent cascade of reactions. This synthetic strategy avoids conventional multistep protocols and does not require the protection of hydroxyl groups, thus allowing the facile synthesis of a library of various aromatic and heterocyclic analogues of naturally occurring homoisoflavonoids.

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