Seasonal trends of PCBs in air over Washington DC reveal localized urban sources and the influence of Anacostia River.

Semi-volatile organic compounds like polychlorinated biphenyls (PCBs) undergo diffusive exchange flux between a water body and the overlying air. The magnitude of this exchange can be a substantial component of the overall pollutant mass balance and needs to be determined accurately to identify major pollutant sources to the water body and to plan appropriate remedies. For the PCB-impacted Anacostia River in Washington DC (USA), quantification of air-water exchange has been a major data gap.

Using modelled relationships and satellite observations to attribute modelled aerosol biases over biomass burning regions.

Biomass burning (BB) is a major source of aerosols that remain the most uncertain components of the global radiative forcing. Current global models have great difficulty matching observed aerosol optical depth (AOD) over BB regions. A common solution to address modelled AOD biases is scaling BB emissions.

Data-driven COVID-19 policy is more effective than a one-size-fits-all approach.

The latest COVID-19 guidelines from the Centers for Disease Control and Prevention (CDC) discount the best data sources and rely too heavily on outdated, one-size-fits-all decision rules. Instead, the CDC should recommend data-driven guidelines, which are more accurate, adaptable, transparent about implicit tradeoffs, and tailored to the relevant context.

The Structure of Saccharomyces cerevisiae Arginyltransferase 1 (ATE1).

Eukaryotic post-translational arginylation, mediated by the family of enzymes known as the arginyltransferases (ATE1s), is an important post-translational modification that can alter protein function and even dictate cellular protein half-life. Multiple major biological pathways are linked to the fidelity of this process, including neural and cardiovascular developments, cell division, and even the stress response. Despite this significance, the structural, mechanistic, and regulatory mechanisms that govern ATE1 function remain enigmatic.

Mind bomb 2 promotes cell migration and epithelial structure by regulating adhesion complexes and the actin cytoskeleton.

Cell migration is essential in animal development and co-opted during metastasis and inflammatory diseases. Some cells migrate collectively, which requires them to balance epithelial characteristics such as stable cell-cell adhesions with features of motility like rapid turnover of adhesions and dynamic cytoskeletal structures. How this is regulated is not entirely clear but important to understand.

The transcriptional regulator CtrA controls gene expression in Alphaproteobacteria phages: Evidence for a lytic deferment pathway.

Pilitropic and flagellotropic phages adsorb to bacterial pili and flagella. These phages have long been used to investigate multiple aspects of bacterial physiology, such as the cell cycle control in the Caulobacterales. Targeting cellular appendages for adsorption effectively constrains the population of infectable hosts, suggesting that phages may have developed strategies to maximize their infective yield.

Optical measurement of the picosecond fluid mechanics in simple liquids generated by vibrating nanoparticles: a review.

Standard continuum assumptions commonly used to describe the fluid mechanics of simple liquids have the potential to break down when considering flows at the nanometer scale. Two common assumptions for simple molecular liquids are that (1) they exhibit a Newtonian response, where the viscosity uniquely specifies the linear relationship between the stress and strain rate, and (2) the liquid moves in tandem with the solid at any solid-liquid interface, known as the no-slip condition. However, even simple molecular liquids can exhibit a non-Newtonian, viscoelastic response at the picosecond time scales that are characteristic of the motion of many nanoscale objects; this viscoelasticity arises because these time scales can be comparable to those of molecular relaxation in the liquid.

Family member roles in long term care: Lessons for the future from COVID-19.

This study investigates nursing home residents' and care partners' experiences during COVID-19 visitation restrictions. A nonprobability purposive sample of care partners was recruited via social media and email listservs. Care partners completed surveys (N = 30) and follow-up interviews (n = 17).

Multi-Subject Analysis for Brain Developmental Patterns Discovery via Tensor Decomposition of MEG Data.

Identification of informative signatures from electrophysiological signals is important for understanding brain developmental patterns, where techniques such as magnetoencephalography (MEG) are particularly useful. However, less attention has been given to fully utilizing the multidimensional nature of MEG data for extracting components that describe these patterns. Tensor factorizations of MEG yield components that encapsulate the data's multidimensional nature, providing parsimonious models identifying latent brain patterns for meaningful summarization of neural processes.

Light-dependent effects on mood: Mechanistic insights from animal models.

Light is an important environmental stimulus that exerts a powerful influence on physiology and behavior across multiple timescales. Organisms have adapted to respond to the predictable 24-h light/dark cycle imposed by the solar day using this light information to appropriately time physiological and behavioral functions while acute changes in the light environment provide important salient cues to induce rapid responses. Variations in the light environment caused by seasonal changes in daylength as well as those prevalent in modern day life (artificial lighting, transmeridian travel) have made the light environment more irregular and unpredictable.

A pilot study to understand the relationship between cortical arousals and leg movements during sleep.

Leg movements during sleep occur in patients with sleep pathology and healthy individuals. Some (but not all) leg movements during sleep are related to cortical arousals which occur without conscious awareness but have a significant effect of sleep fragmentation. Detecting leg movements during sleep that are associated with cortical arousals can provide unique insight into the nature and quality of sleep.

Emerging 3D printing technologies and methodologies for microfluidic development.

This review paper examines recent (mostly 2018 or later) advancements in 3D printed microfluidics. Microfluidic devices are widely applied in various fields such as drug delivery, point-of-care diagnosis, and bioanalytical research. In addition to soft lithography, 3D printing has become an appealing technology to develop microfluidics recently.

The structure of Vibrio cholerae FeoC reveals conservation of the helix-turn-helix motif but not the cluster-binding domain.

Most pathogenic bacteria require ferrous iron (Fe) in order to sustain infection within hosts. The ferrous iron transport (Feo) system is the most highly conserved prokaryotic transporter of Fe, but its mechanism remains to be fully characterized. Most Feo systems are composed of two proteins: FeoA, a soluble SH3-like accessory protein, and FeoB, a membrane protein that translocates Fe across a lipid bilayer.

Hospital And Regional Characteristics Associated With Emergency Department Facility Fee Cash Pricing.

Self-pay patients are an understudied yet important and financially vulnerable population of emergency department (ED) users. As ED facility fees may be a key cost driver in patient ED bills, we leveraged newly available hospital pricing data to describe ED facility fees for self-pay patients (cash prices) and how they vary according to hospital and regional characteristics in a sample of 1,621 hospitals across the United States. The median cash price for ED facility fees ranged from $160.

probe and inhibitory RNA synthesis using streamlined gene cloning with Gibson assembly.

The synthesis of single-stranded riboprobes or double-stranded RNAs for hybridization and gene knockdowns often use vectors that require time-consuming plasmid restriction digests and inefficient gel purifications. Here, we present a faster protocol for the simultaneous plasmid restriction digestion and Gibson assembly of vectors for the synthesis of both riboprobes and double-stranded RNAs for and RNA interference experiments, respectively. We illustrate the protocol with planaria and RNAi assays, but it is applicable to any organism.

Multi-dimensional Fluorescence Live-Cell Imaging for Glucosome Dynamics in Living Human Cells.

Fluorescence live-cell imaging that has contributed to our understanding of cell biology is now at the frontline of studying quantitative biochemistry in a cell. Particularly, technological advancements of fluorescence live-cell imaging and associated strategies in recent years have allowed us to discover various subcellular macromolecular assemblies in living human cells. Here we describe how real-time dynamics of a multienzyme metabolic assembly, the "glucosome," that is responsible for regulating glucose flux at subcellular levels, has been investigated in both 2- and 3-dimensional space of single human cells.

A Closer Look at Non-random Patterns Within Chemistry Space for a Smaller, Earlier Amino Acid Alphabet.

Recent findings, in vitro and in silico, are strengthening the idea of a simpler, earlier stage of genetically encoded proteins which used amino acids produced by prebiotic chemistry. These findings motivate a re-examination of prior work which has identified unusual properties of the set of twenty amino acids found within the full genetic code, while leaving it unclear whether similar patterns also characterize the subset of prebiotically plausible amino acids. We have suggested previously that this ambiguity may result from the low number of amino acids recognized by the definition of prebiotic plausibility used for the analysis.

A general protocol for the expression and purification of the intact transmembrane transporter FeoB.

Ferrous iron (Fe) transport is an essential process that supports the growth, intracellular survival, and virulence of several drug-resistant pathogens, and the ferrous iron transport (Feo) system is the most important and widespread protein complex that mediates Fe transport in these organisms. The Feo system canonically comprises three proteins (FeoA/B/C). FeoA and FeoC are both small, accessory proteins localized to the cytoplasm, and their roles in the Fe transport process have been of great debate.

Comparison of the Old and New - Novel Mechanisms of Action for Anti-coronavirus Nucleoside Analogues.

Over the past two and a half years the world has seen a desperate scramble to find a treatment for SARS-CoV-2 and COVID. In that regard, nucleosides have long served as the cornerstone to antiviral treatments due to their resemblance to the naturally occurring nucleosides that are involved in numerous biological processes. Unlike other viruses however, it was found early on during the search for drugs to treat SARS-1 and later MERS, that the coronaviruses possess a unique repair enzyme, an exonuclease (ExoN)[3] which rendered nucleoside analogues useless, thus negating their use.

Computational Systems Biology of Morphogenesis.

Extracting mechanistic knowledge from the spatial and temporal phenotypes of morphogenesis is a current challenge due to the complexity of biological regulation and their feedback loops. Furthermore, these regulatory interactions are also linked to the biophysical forces that shape a developing tissue, creating complex interactions responsible for emergent patterns and forms. Here we show how a computational systems biology approach can aid in the understanding of morphogenesis from a mechanistic perspective.

Advanced oxidation processes: Performance, advantages, and scale-up of emerging technologies.

Advanced oxidation processes (AOPs) are promising technologies for partial or complete mineralization of contaminants of emerging concern by highly reactive hydroxyl, hydroperoxyl, superoxide, and sulphate radicals. Detailed investigations and reviews have been reported for conventional AOP systems that have been installed in full-scale wastewater treatment plants. However, recent efforts have focused on the peroxymonosulphate, persulphate, catalytic ozonation, ultrasonication and hydrodynamic cavitation, gamma radiation, electrochemical oxidation, modified Fenton, and plasma-assisted AOPs.

Faculty must lead inclusion.

Later this year, I will step down as president of the University of Maryland, Baltimore County (UMBC), after 30 years. I know this to be true-faculty members have the power. Presidents, provosts, and senior leaders at an institution set a tone and create the setting for successful programs.