3,622 results match your criteria: "University of Dublin.[Affiliation]"

Pepper mild mottle virus as an effective tool in microbial source tracking for deficient domestic on-site water treatment systems.

Sci Total Environ

August 2024

Department of Civil, Structural and Environmental Engineering, Trinity College Dublin, The University of Dublin, College Green, Dublin 2, Ireland.

Pollution from domestic on-site wastewater treatment systems (OWTS) is a significant contaminant pressure in many rural catchments. However, due to their design, and dispersed proliferation, it is difficult to assess their impact. Water testing methodologies employ bacterial culturing methods and chemical analysis which may lose resolution and/or specificity being confounded by diffuse agricultural sources within a rural environment.

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Fluorescent Probes for Disease Diagnosis.

Chem Rev

June 2024

School of Chemistry and Trinity Biomedical Sciences Institute (TBSI), Trinity College Dublin, The University of Dublin, Dublin 2 D02 R590, Ireland.

The identification and detection of disease-related biomarkers is essential for early clinical diagnosis, evaluating disease progression, and for the development of therapeutics. Possessing the advantages of high sensitivity and selectivity, fluorescent probes have become effective tools for monitoring disease-related active molecules at the cellular level and . In this review, we describe current fluorescent probes designed for the detection and quantification of key bioactive molecules associated with common diseases, such as organ damage, inflammation, cancers, cardiovascular diseases, and brain disorders.

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The Pd-catalysed decarboxylative asymmetric allylic alkylation (DAAA) has been applied to the enantioselective synthesis of sterically hindered benzofuran-3(2H)-one-derived α-aryl-β-keto esters employing the (R,R)-ANDEN phenyl Trost ligand. A range of substrates were synthesised, employing previously developed aryllead triacetate methodology to install various aryl groups. The resulting α-aryl-α-allyl benzofuran-3(2H)-one DAAA products were obtained in moderate to high yields and in enantioselectivities of up to 96 % ee, with the best results observed for substrates containing a di-ortho-substitution pattern on the aryl ring as well as naphthyl-containing substrates.

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Preparation and characterization of MnMn complexes with relevance to class Ib ribonucleotide reductases.

J Inorg Biochem

August 2024

School of Chemistry, Trinity College Dublin, The University of Dublin, College Green, Dublin 2, Ireland. Electronic address:

Article Synopsis
  • The Mn complex [Mn(TPDP)(OCPh)](BPh) was synthesized and extensively characterized using multiple analytical techniques to investigate its role as a mimic of class Ib ribonucleotide reductases (RNRs).
  • Upon reacting with superoxide anion, the complex formed a peroxido-MnMn complex, showing electronic spectra similar to known peroxido-MnMn compounds, indicating changes in the manganese core structure.
  • The new species generated from this reaction showed unique oxidative capabilities, specifically in O-H activation, reflecting some functions of class Ib RNRs but without forming a typical MnMn state.
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Characteristics of zero-valent iron surface oxide films under the catalytic interface reactions by assisting ligands in nitrate-contaminated groundwater.

J Hazard Mater

July 2024

Civil Structural & Environmental Engineering, Trinity College Dublin, The University of Dublin, College Green, Dublin 2 D02 PN40, Ireland. Electronic address:

Article Synopsis
  • The study investigated how a surface passivation layer on zero-valent iron (ZVI) particles affects nitrate reduction, finding that the electron transfer is hindered by this layer.
  • By adjusting the thickness of the iron oxide coating through adding iron in solution and using wheat straw as a ligand, researchers observed significant improvements in nitrate removal rates as iron concentration increased.
  • The findings indicate that the thickness of the iron oxide layer can be controlled, which enhances the efficiency of the reduction process, leading to better nitrate removal through the introduction of additional materials like iron and wheat straw.
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Demographics, culture and participatory nature of multi-marathoning-An observational study highlighting issues with recommendations.

PLoS One

May 2024

Trinity Department of Mechanical, Manufacturing and Biomedical Engineering, Trinity College, The University of Dublin, Dublin, Ireland.

Objectives: The defining achievement of a multi-marathoner is completing 100 marathons. This study aimed to comprehensively document the phenomenon of multi-marathoning, addressing its demographics, culture and participatory nature, filling a gap in peer-reviewed research on the topic. Additionally, it aimed to provide recommendations for multi-marathon governing bodies, event organisers, health professionals and participants to address identified issues.

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Sessile water droplet evaporation in varied gravity and electric fields has been experimentally studied. Specifically, the influences of gravity and electric fields are investigated in the context of the heat flux distribution beneath the droplets, as well as the droplet mechanics and resulting shapes. Experimental testing was carried out during a European Space Agency (ESA) Parabolic Flight Campaign (PFC 66).

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Introduction: Connecting inactive individuals to local physical activity (PA) and exercise, via intermediaries (professionals who can facilitate and support connections to non-medical services) may be an effective method to tackle physical inactivity. Evidence regarding the processes of intermediaries, the profile of people referred, how connections to local PA and exercise are made and outcomes of these connections is lacking.

Methods: This scoping review followed guidelines from the Joanna Briggs Institute.

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Article Synopsis
  • The study evaluates how surgical intervention affects anxiety levels in patients with different types of pituitary adenomas, using a systematic review of 32 studies involving 2,681 patients.
  • Results showed that anxiety scores measured before and after surgery did not exhibit significant differences, implying that surgery may not impact anxiety levels in these patients.
  • The findings highlight the need for more robust research due to the limitations of existing studies and the varying patient characteristics involved.
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There are no known estimates of the prevalence, severity and impacts from breathlessness in low- and middle-income countries. This study aimed to explore the prevalence, severity, self-attributed underlying conditions and impacts of breathlessness limiting exertion in community-dwelling adults in India. This exploratory, population-based online survey recruited a pre-planned sample of 3,000 adult respondents stratified by age, sex and rurality (quotas as per the 2011 Indian National Census).

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Contribution of microglia to the epileptiform activity that results from neonatal hypoxia.

Neuropharmacology

August 2024

Discipline of Physiology, School of Medicine, Trinity College Dublin, The University of Dublin, Dublin, Ireland. Electronic address:

Microglia are described as the immune cells of the brain, their immune properties have been extensively studied since first described, however, their neural functions have only been explored over the last decade. Microglia have an important role in maintaining homeostasis in the central nervous system by surveying their surroundings to detect pathogens or damage cells. While these are the classical functions described for microglia, more recently their neural functions have been defined; they are critical to the maturation of neurons during embryonic and postnatal development, phagocytic microglia remove excess synapses during development, a process called synaptic pruning, which is important to overall neural maturation.

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Role of the addiction clinical nurse specialist in acute hospital settings.

Nurs Stand

June 2024

School of Nursing and Midwifery, Trinity College Dublin, The University of Dublin, Dublin, Republic of Ireland.

Background: The role of an addiction clinical nurse specialist (ACNS) is focused on individuals who misuse drugs and alcohol, and several benefits of the role have been identified in the literature. When people who misuse substances are admitted to acute general hospitals, there is an opportunity to engage with them and ensure they access support services to facilitate their recovery.

Aim: To determine general nurses' experience of caring for patients who misuse substances, and to gauge nurses' views on the implementation of an ACNS role in an acute general hospital.

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A joint physics and radiobiology DREAM team vision - Towards better response prediction models to advance radiotherapy.

Radiother Oncol

July 2024

Applied Radiation Therapy Trinity (ARTT), Discipline of Radiation Therapy, School of Medicine, Trinity St. James's Cancer Institute, Trinity College Dublin, University of Dublin, Dublin, Ireland.

Radiotherapy developed empirically through experience balancing tumour control and normal tissue toxicities. Early simple mathematical models formalized this practical knowledge and enabled effective cancer treatment to date. Remarkable advances in technology, computing, and experimental biology now create opportunities to incorporate this knowledge into enhanced computational models.

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Article Synopsis
  • Angiosperms are vital for ecosystems and human life, making it important to understand their evolutionary history to grasp their ecological dominance.
  • The study builds an extensive tree of life for about 8,000 angiosperm genera using 353 nuclear genes, significantly increasing the sampling size and refining earlier classifications.
  • The findings reveal a complex evolutionary history marked by high gene tree conflict and rapid diversification, particularly during the early angiosperm evolution, with shifts in diversification rates linked to global temperature changes.
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Midpalatal miniscrew insertion: The accuracy of digital planning and surgical placement.

Am J Orthod Dentofacial Orthop

July 2024

Division of Public and Child Dental Health, Dublin Dental University Hospital, The University of Dublin, Trinity College Dublin, Dublin, Ireland. Electronic address:

Introduction: The objective of this study was to investigate the accuracy of palatal miniscrew insertion, evaluating the effect of guide fabrication and surgical placement.

Methods: Guided insertion of bilateral paramedian palatal miniscrews was undertaken using Appliance Designer software (3Shape, Copenhagen, Denmark). A resin surgical guide (P Pro Surgical Guide; Straumann AG, Basel, Switzerland) was used.

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Background: In the UK, smoking prevalence in people with depression (34%) and anxiety (29%) is more than double that of the general population (13%). People who stop smoking improve their mental health with comparable effect sizes found for antidepressants. In England, online psychological therapy is a standard treatment for depression and anxiety.

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Background: Many gastric cancer patients in Western countries are diagnosed as metastatic with a median overall survival of less than twelve months using standard chemotherapy. Innovative treatments, like targeted therapy or immunotherapy, have recently proved to ameliorate prognosis, but a general agreement on managing oligometastatic disease has yet to be achieved. An international multi-disciplinary workshop was held in Bertinoro, Italy, in November 2022 to verify whether achieving a consensus on at least some topics was possible.

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Methane emission from a cool brown dwarf.

Nature

April 2024

Department of Astrophysics, American Museum of Natural History, New York, NY, USA.

Beyond our Solar System, aurorae have been inferred from radio observations of isolated brown dwarfs. Within our Solar System, giant planets have auroral emission with signatures across the electromagnetic spectrum including infrared emission of H and methane. Isolated brown dwarfs with auroral signatures in the radio have been searched for corresponding infrared features, but only null detections have been reported.

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Editorial: Insights in learning and memory: 2022.

Front Behav Neurosci

April 2024

School of Medicine, IMPACT - the Institute for Mental and Physical Health and Clinical Translation, Deakin University, Geelong, VIC, Australia.

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Molecular Symmetry and Art: Visualizing the Near-Symmetry of Molecules in Piet Mondrian's De Stijl.

Angew Chem Int Ed Engl

June 2024

School of Chemistry, Chair of Organic Chemistry, Trinity College Dublin, The University of Dublin, Trinity Biomedical Sciences Institute, 152-160 Pearse Street, Dublin, D02R590, Ireland.

Symmetry and shape are essential aspects of molecular structure and how we interpret molecules and their properties. We, as chemists, are comfortable with pictorial representations of structure, in which some nuance is lost-investigating molecular shape numerically by looking at how closely it fits a reference, such as a plane, or a set of vectors or coordinates, is informative, though far from engaging. Often relationships between chemical structure and derived values are obscured.

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In exploring structural and functional mimics of nitrile hydratases, we report the synthesis of the -trigonal bipyramidal Co complexes (K)[Co(DMF)(L)] (), (NMe)[Co(OAc)(L)] (), and (NMe)[Co(OH)(L)] () (L = 2,2',2''-nitrilo--(-phenylacetamide; DMF = ,-dimethylformamide; OAc = acetate)). The complexes were characterized using NMR, FT-IR, ESI-MS, electronic absorption spectroscopy, and X-ray crystallography, showing the L ligand to bind in a tetradentate tripodal fashion alongside the respective ancillary donor. One of the complexes, , is an unusual structural and functional mimic of the Co active site in Co nitrile hydratases.

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Bacterial contamination of karst groundwater is a major concern for public health. Artificial tracing studies are crucial for establishing links between locations where pollutants can rapidly reach the aquifer systems and subsequent receptors, as well as for enhanced understanding of pollutant transport. However, widely used solute artificial tracers do not always move through the subsurface in the same manner as particles and microorganisms, hence may not be ideal proxies for predicting movement of bacterial contaminants.

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Examining short interval intracortical inhibition with different transcranial magnetic stimulation-induced current directions in ALS.

Clin Neurophysiol Pract

March 2024

Academic Unit of Neurology, School of Medicine, Trinity Biomedical Sciences Institute, Trinity College Dublin, University of Dublin, Ireland.

Objective: To establish if induced current direction across the motor cortex alters the sensitivity of transcranial magnetic stimulation (TMS)-evoked short-interval intracortical inhibition (SICI) as an ALS biomarker.

Methods: Threshold tracking-TMS was undertaken in 35 people with ALS and 39 controls. Using a coil orientation which induces posterior-anterior (PA)-directed current across the motor cortex, SICI (1 ms and 3 ms interstimulus intervals) and intracortical facilitation (ICF, 10 ms interstimulus interval) were recorded.

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