150 results match your criteria: "Universitetsparken 4[Affiliation]"

Mechanisms of waterlogging tolerance in wheat--a review of root and shoot physiology.

Plant Cell Environ

May 2016

Freshwater Biological Laboratory, Department of Biology, University of Copenhagen, Universitetsparken 4, 3rd floor, 2100, Copenhagen, Denmark.

Article Synopsis
  • Waterlogging negatively affects wheat physiology, growth, and yield by causing root oxygen deficiency, which leads to low root-to-shoot ratios and limits root regrowth upon re-aeration.
  • Genetic diversity exists in wheat varieties regarding waterlogging tolerance, with differences in seminal root anoxia tolerance and adventitious root growth, but mechanisms for these traits are not fully understood.
  • Future breeding efforts should target enhancing root internal aeration and nitrogen-use efficiency to improve waterlogging resilience in wheat.
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Photosynthesis of most seagrass species seems to be limited by present concentrations of dissolved inorganic carbon (DIC). Therefore, the ongoing increase in atmospheric CO2 could enhance seagrass photosynthesis and internal O2 supply, and potentially change species competition through differential responses to increasing CO2 availability among species. We used short-term photosynthetic responses of nine seagrass species from the south-west of Australia to test species-specific responses to enhanced CO2 and changes in HCO3 (-) .

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Spatio-temporal relief from hypoxia and production of reactive oxygen species during bud burst in grapevine (Vitis vinifera).

Ann Bot

September 2015

School of Plant Biology, and The Institute of Agriculture, The University of Western Australia, Crawley, WA, 6009 Australia, Centre for Plant Sciences, University of Leeds, Leeds, Yorkshire LS29JT, UK and Department of Agriculture and Food Western Australia, South Perth, WA, 6151 Australia

Background And Aims: Plants regulate cellular oxygen partial pressures (pO2), together with reduction/oxidation (redox) state in order to manage rapid developmental transitions such as bud burst after a period of quiescence. However, our understanding of pO2 regulation in complex meristematic organs such as buds is incomplete and, in particular, lacks spatial resolution.

Methods: The gradients in pO2 from the outer scales to the primary meristem complex were measured in grapevine (Vitis vinifera) buds, together with respiratory CO2 production rates and the accumulation of superoxide and hydrogen peroxide, from ecodormancy through the first 72 h preceding bud burst, triggered by the transition from low to ambient temperatures.

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Development of a multiplex real-time qPCR assay for simultaneous enumeration of up to four marine toxic bloom-forming microalgal species.

Harmful Algae

September 2015

Marine Biological Section, Department of Biology, University of Copenhagen, Universitetsparken 4, DK-2100 Copenhagen Ø, Denmark.

Harmful algal blooms (HAB) pose serious economic and health risks worldwide. Current methods of identification require high levels of taxonomic skill and can be highly time-consuming thus limiting sample throughput. So, new rapid and reliable methods for detection and enumeration of HAB species are required.

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Invertebrate Metacommunity Structure and Dynamics in an Andean Glacial Stream Network Facing Climate Change.

PLoS One

May 2016

IRD, Institut de Recherche pour le Développement, UMR EGCE, IRD-247 CNRS-UP Sud-9191, 91198 Gif-sur-Yvette cedex, France; Pontificia Universidad Católica del Ecuador, Facultad de Ciencias Exactas y Naturales, Quito, Ecuador; Instituto de Ecología, Universidad Mayor San Andrés, Cotacota, La Paz, Bolivia.

Under the ongoing climate change, understanding the mechanisms structuring the spatial distribution of aquatic species in glacial stream networks is of critical importance to predict the response of aquatic biodiversity in the face of glacier melting. In this study, we propose to use metacommunity theory as a conceptual framework to better understand how river network structure influences the spatial organization of aquatic communities in glacierized catchments. At 51 stream sites in an Andean glacierized catchment (Ecuador), we sampled benthic macroinvertebrates, measured physico-chemical and food resource conditions, and calculated geographical, altitudinal and glaciality distances among all sites.

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Spiralian phylogeny informs the evolution of microscopic lineages.

Curr Biol

August 2015

Marine Biological Section, Department of Biology, University of Copenhagen, Universitetsparken 4, 2100 Copenhagen Ø, Denmark.

Article Synopsis
  • Scientists are studying tiny animals to learn more about how animals evolved over time.
  • Some newly discovered groups of these small creatures, like Micrognathozoa and Loricifera, have interesting features that make them different from other animals.
  • By looking at their genetics, researchers found that some of these microscopic animals are closely related to worms and other small creatures, which helps us understand the family tree of animals better.
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The legacy of pesticide pollution: An overlooked factor in current risk assessments of freshwater systems.

Water Res

November 2015

Aarhus University, Department of Bioscience, Vejlsøvej 25, 8600 Silkeborg, Denmark; NIVA, Section for Freshwater Biology, Gaustadalléen 21, NO-0349 Oslo, Norway.

We revealed a history of legacy pesticides in water and sediment samples from 19 small streams across an agricultural landscape. Dominant legacy compounds included organochlorine pesticides, such as DDT and lindane, the organophosphate chlorpyrifos and triazine herbicides such as terbutylazine and simazine which have long been banned in the EU. The highest concentrations of legacy pesticides were found in streams draining catchments with a large proportion of arable farmland suggesting that they originated from past agricultural applications.

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Peridinium polonicum is a freshwater peridinioid with an unusual tabulation that includes one or two anterior intercalary plates in the mid-dorsal axis, and in such a low position that it seems inset in precingular Plate 4. Although the species has been classified in both Peridinium and Peridiniopsis, evidence from nucleotide sequences consistently shows that its closest relatives are within the Scrippsiella group. The genus Naiadinium Carty has been recently described with P.

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Barnacles are exceptional in having various sexual systems (androdioecy, hermaphroditism, dioecy) and with a high morphological diversity of males, though these are always minute (dwarf) compared to their female or hermaphrodite partners. For the first time, we use a multiple DNA marker-based phylogeny to elucidate the ancestral states and evolution of (1) dwarf males, (2) their morphology when present, (3) their attachment site on the partner, and (4) habitat use in thoracican barnacles. Our taxon sampling was especially rich in rare deep-sea Scalpelliformes and comprised species with diverse sexual systems and dwarf male morphologies.

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Introduction: Limnognathia maerski is the single species of the recently described taxon, Micrognathozoa. The most conspicuous character of this animal is the complex set of jaws, which resembles an even more intricate version of the trophi of Rotifera and the jaws of Gnathostomulida. Whereas the jaws of Limnognathia maerski previously have been subject to close examinations, the related musculature and other organ systems are far less studied.

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A new species of Ophryotrocha was discovered on whalebones in Greenland (120 m depth) and at finfish aquaculture sites in Newfoundland (30-70 m depth), where it is considered to be a bioindicator of aquaculture-related organic enrichment. Phylogenetic analyses based on three genes (COI, 16S mitochondrial and H3 nuclear genes) show close affinities with O. lobifera and O.

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Darwin hypothesized that sexes in a species should be similar unless sexual selection, fecundity selection, or resource partitioning has driven them apart. Male dwarfism has evolved multiple times in a range of animals, raising questions about factors that drive such extreme size dimorphism. Ghiselin noted that dwarf males are more common among smaller marine animals, and especially among sedentary and sessile species living at low densities, where mates are difficult to find, or in deep-sea environments with limited energy sources.

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Contrasting submergence tolerance in two species of stem-succulent halophytes is not determined by differences in stem internal oxygen dynamics.

Ann Bot

February 2015

School of Plant Biology and Institute of Advances Studies, The University of Western Australia, 35 Stirling Highway, Crawley, WA 6009, Australia and Freshwater Biological Laboratory, Institute of Biology, University of Copenhagen, Universitetsparken 4, 2100 Copenhagen, Denmark.

Background And Aims: Many stem-succulent halophytes experience regular or episodic flooding events, which may compromise gas exchange and reduce survival rates. This study assesses submergence tolerance, gas exchange and tissue oxygen (O2) status of two stem-succulent halophytes with different stem diameters and from different elevations of an inland marsh.

Methods: Responses to complete submergence in terms of stem internal O2 dynamics, photosynthesis and respiration were studied for the two halophytic stem-succulents Tecticornia auriculata and T.

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Cells of five unarmoured kleptoplastidic dinoflagellates, Amphidinium latum, Amphidinium poecilochroum, Gymnodinium amphidinioides, Gymnodinium acidotum and Gymnodinium aeruginosum were observed under light and/or scanning electron microscopy and subjected to single-cell PCR. The SSU rDNA and the partial LSU rDNA of all the examined species were sequenced, and the SSU rDNA of G. myriopyrenoides was sequenced.

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Molecular phylogeny, systematics and morphological evolution of the acorn barnacles (Thoracica: Sessilia: Balanomorpha).

Mol Phylogenet Evol

December 2014

Computational Biology Institute, George Washington University, Ashburn, VA 20147, USA; Department of Invertebrate Zoology, US National Museum of Natural History, Smithsonian Institution, Washington, DC 20013, USA.

The Balanomorpha are the largest group of barnacles and rank among the most diverse, commonly encountered and ecologically important marine crustaceans in the world. Paradoxically, despite their relevance and extensive study for over 150years, their evolutionary relationships are still unresolved. Classical morphological systematics was often based on non-cladistic approaches, while modern phylogenetic studies suffer from severe undersampling of taxa and characters (both molecular and morphological).

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Visualisation by high resolution synchrotron X-ray phase contrast micro-tomography of gas films on submerged superhydrophobic leaves.

J Struct Biol

October 2014

School of Plant Biology, The University of Western Australia, 35 Stirling Highway, Crawley, 6009 WA, Australia; The Freshwater Biological Laboratory, University of Copenhagen, Universitetsparken 4, 3rd Floor, 2100 Copenhagen, Denmark; Institute of Advanced Studies, The University of Western Australia, 35 Stirling Highway, Crawley, 6009 WA, Australia. Electronic address:

Floods can completely submerge terrestrial plants but some wetland species can sustain O2 and CO2 exchange with the environment via gas films forming on superhydrophobic leaf surfaces. We used high resolution synchrotron X-ray phase contrast micro-tomography in a novel approach to visualise gas films on submerged leaves of common cordgrass (Spartina anglica). 3D tomograms enabled a hitherto unmatched level of detail regarding the micro-topography of leaf gas films.

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Ecophysiology of gelatinous Nostoc colonies: unprecedented slow growth and survival in resource-poor and harsh environments.

Ann Bot

July 2014

Freshwater Biological Laboratory, Biological Institute, University of Copenhagen, Universitetsparken 4, 2100 Copenhagen, Denmark

Background: The cyanobacterial genus Nostoc includes several species forming centimetre-large gelatinous colonies in nutrient-poor freshwaters and harsh semi-terrestrial environments with extended drought or freezing. These Nostoc species have filaments with normal photosynthetic cells and N2-fixing heterocysts embedded in an extensive gelatinous matrix of polysaccharides and many other organic substances providing biological and environmental protection. Large colony size imposes constraints on the use of external resources and the gelatinous matrix represents extra costs and reduced growth rates.

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Sexual dimorphism in Tripedaliidae (Conant 1897) (Cnidaria, Cubozoa, Carybdeida).

Zootaxa

April 2014

Departamento de Zoologia, Instituto de Biociências, Universidade de São Paulo, Rua do Matão, trav. 14, n. 101, 05508-090, São Paulo, Brazil.; Email:

The family Tripedaliidae was re-defined and expanded based on a molecular phylogenetic hypothesis by Bentlage et al. (2010, Proceedings of the Royal Society Biological Science, 277: 497). Additionally, Bentlage et al.

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Article Synopsis
  • The study examined how different rice genotypes respond to flooding, focusing on gas film persistence and underwater photosynthesis (PN).
  • All four genotypes showed high underwater PN rates initially under high CO2 conditions, but FR13A maintained this better over time compared to the others.
  • The research suggests that screening diverse rice varieties for gas film retention could enhance submergence tolerance by improving underwater PN.
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Partial versus complete submergence: snorkelling aids root aeration in Rumex palustris but not in R. acetosa.

Plant Cell Environ

October 2014

The Freshwater Biological Laboratory, Department of Biology, University of Copenhagen, Universitetsparken 4, 3rd Floor, Copenhagen, 2100, Denmark.

The root and shoot tissues of flood-tolerant wetland plants are highly porous to enable internal gas phase diffusion of O2 during waterlogging or submergence. In the case of only partial submergence (snorkelling), the atmosphere can act as source of O2 . The aim of this study was to assess the effect of waterlogging, partial submergence and complete submergence in the dark as well as in light on O2 partial pressure (pO2 ) in roots of Rumex palustris (flood tolerant) and R.

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Evolution of sex determination and sexually dimorphic larval sizes in parasitic barnacles.

J Theor Biol

April 2014

Department of Biology, Faculty of Sciences, Kyushu University, Fukuoka 812-8581, Japan. Electronic address:

The parasitic (rhizocephalan) barnacles include species of which larval sex is determined by the mother (genetic sex determination, GSD), male larvae are larger than female larvae, and a female accepts only two dwarf males who sire all the eggs laid by her. In contrast, other species of parasitic barnacles exhibit monomorphic larvae that choose to become male or female depending on the condition of the host they settle (environmental sex determination, or ESD), and a female accepts numerous dwarf males. Here, we ask why these set of traits are observed together, by examining the evolution of sex determination and the larval size.

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Visual navigation in starfish: first evidence for the use of vision and eyes in starfish.

Proc Biol Sci

February 2014

Section of Marine Biology, Department of Biology, University of Copenhagen, , Universitetsparken 4, Copenhagen Ø 2100, Denmark, Lund Vision Group, Department of Biology, Lund University, , Sölvegatan 35, Lund 22362, Sweden.

Most known starfish species possess a compound eye at the tip of each arm, which, except for the lack of true optics, resembles an arthropod compound eye. Although these compound eyes have been known for about two centuries, no visually guided behaviour has ever been directly associated with their presence. There are indications that they are involved in negative phototaxis but this may also be governed by extraocular photoreceptors.

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Marine phytoplankton samples containing diatoms of the Chaetoceros socialis group were collected from Thailand, China, Denmark, and Greenland, and cells were isolated into culture for light and electron microscopy and DNA sequencing of D1-D3 of the LSU rDNA. Species of this lineage are characterized by three short and one long setae extending from each cell, the long setae from several cells joining into a common center to form large colonies, which are sometimes visible with the naked eye. Phylogenetic analyses including sequences from other parts of the world revealed segregation into three groups.

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Swim pacemaker response to bath applied neurotransmitters in the cubozoan Tripedalia cystophora.

J Comp Physiol A Neuroethol Sens Neural Behav Physiol

September 2013

Marine Biological Section, University of Copenhagen, Universitetsparken 4, 2100 Copenhagen, Denmark.

The four rhopalia of cubomedusae are integrated parts of the central nervous system carrying their many eyes and thought to be the centres of visual information processing. Rhopalial pacemakers control locomotion through a complex neural signal transmitted to the ring nerve and the signal frequency is modulated by the visual input. Since electrical synapses have never been found in the cubozoan nervous system all signals are thought to be transmitted across chemical synapses, and so far information about the neurotransmitters involved are based on immunocytochemical or behavioural data.

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The marine dinoflagellate Amphisolenia bidentata possesses complete intracellular symbionts of prokaryotic and eukaryotic origin. This was confirmed ultrastructurally little over 20 years ago when it was showed that the eukaryotic endosymbiont had a nucleus, a chloroplast and mitochondria. We collected Amphisolenia bidentata cells in the Indian Ocean and the identity of the eukaryotic endosymbionts was investigated using both microscopical and molecular methods.

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