1,072 results match your criteria: "United Graduate School of Agricultural Science[Affiliation]"

The domestic silkworm, , has been widely used in silk production for centuries. It is also used as a bioreactor by the textile and pharmaceutical industries to mass produce recombinant bioactive proteins containing silk-based materials. Furthermore, silkworms are well-known as a source of food and have also been orally administered to prevent and treat several human disorders.

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Quantitative analysis of commercial coating penetration into Fagus crenata wood using X-ray microtomography.

Sci Rep

June 2024

College of Agriculture, Academic Institute, Shizuoka University, Ohya 836, Suruga-ku, Shizuoka, 422-8529, Japan.

Recent advances in wood treatment include the use of eco-friendly coatings to improve the wood's dimensional stability and appearance. Assessing coating performance during its service life is critical for establishing a knowledge base for product optimization. Numerous approaches, including microimaging, are available for analyzing coating behavior.

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We investigated the effects of a calf starter supplemented with calcium salts of medium-chain fatty acids (MCFA-Ca) on growth and plasma hormone concentration in calves. Twelve Holstein calves were randomly assigned to two dietary groups (without supplementation [CON] and supplemented with MCFA-Ca [MCFA]) from 4 d of age. Calves were fed 1.

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Selective biotic stressors' action on seed germination: A review.

Plant Sci

September 2024

Hydrobiogeochemistry and Pollution Control Laboratory, Department of Environmental Sciences, Jahangirnagar University, Dhaka 1342, Bangladesh.

In the realm of plant biology and agriculture, seed germination serves as a fundamental process with far-reaching implications for crop production and environmental health. This comprehensive review seeks to unravel the intricate web of interactions between some biotic stressors and seed germination, addressing the pertinent issue of how these stressors influence seed germination. Different chemicals produced by interacting plants (different parts), fungi, bacteria, or insects can either promote or inhibit seed germination.

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Effective cultivation conditions and safety evaluation of filamentous cyanobacteria producing phycocyanins with antiglycation activities.

J Biotechnol

August 2024

College of Agriculture, Ibaraki University, Ibaraki 300-0393, Japan; United Graduate School of Agricultural Science, Tokyo University of Agriculture and Technology, Tokyo 183-8509, Japan. Electronic address:

We investigated suitable culture conditions for the production of the blue pigment phycocyanin (PC) from the unique filamentous cyanobacteria Pseudanabaena sp. ABRG5-3 and Limnothrix sp. SK1-2-1.

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Alternative localization of HEME OXYGENASE 1 in plant cells regulates cytosolic heme catabolism.

Plant Physiol

July 2024

Department of General Systems Studies, Graduate School of Arts and Sciences, The University of Tokyo, Tokyo 153-8902, Japan.

Heme, an organometallic tetrapyrrole, is widely engaged in oxygen transport, electron delivery, enzymatic reactions, and signal transduction. In plants, it is also involved in photomorphogenesis and photosynthesis. HEME OXYGENASE 1 (HO1) initiates the first committed step in heme catabolism, and it has generally been thought that this reaction takes place in chloroplasts.

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Individuals migrating with chronic diseases often face substantial health risks, and their patterns of healthcare-seeking behavior are commonly influenced by mobility. However, to our knowledge, no research has used spatial statistics to verify this phenomenon. Utilizing data from the China Migrant Dynamic Survey of 2017, we conducted a geostatistical analysis to identify clusters of chronic disease patients among China's internal migrants.

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Biomolecules containing adenosine di- or triphosphate (ADP or ATP) are crucial for diverse biological processes. Synthesis of these biomolecules and development of their chemical probes are important to elucidate their functions. Enabling reproducible and high-yielding access to these ADP- and ATP-containing molecules via conventional P(III)-P(V) and P(V)-P(V) coupling reactions is challenging owing to water content in highly polar phosphate-containing substrates.

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Objective: Lactic acid (LA) treatment of cereals is known to improve ruminant performance. However, changes in cereal nutrient levels and variations in rumen fermentation remain unclear.

Methods: This study was designed to compare the effects of 5% LA treatment on the trophic and morphological characteristics of barley and to discover the differences in rumen fermentation characteristics and metabolomes between LA-treated and untreated barley.

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Revealing gene expression heterogeneity in a clonal population of through single-cell RNA sequencing.

Biochem Biophys Rep

July 2024

Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo, 153-8902, Japan.

We performed single-cell RNA sequencing (scRNA-seq) on a population of 5,000 , using the 10x Genomics 3' gene expression analysis, to investigate gene expression variability within this clonal population. Initially, we estimated the 3'-untranslated regions (3' UTRs), which were absent in existing annotation files but are crucial for the 10x Genomics 3' gene expression analysis, using the peaks2utr method. This allowed us to create a modified annotation file, which was then utilized in our scRNA-seq analysis.

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Effects of diphenhydramine exposure on reproduction of mature Japanese medaka (Oryzias latipes).

Chemosphere

June 2024

Education and Research Center for Marine Resources and Environment, Faculty of Fisheries, Kagoshima University, 50-20 Shimoarata 4-Chome, Kagoshima, 890-0056, Japan. Electronic address:

Article Synopsis
  • Diphenhydramine (DPH) is an antihistamine that persists in the environment due to incomplete degradation in wastewater treatment.
  • Research indicates that long-term exposure to DPH negatively impacts Japanese medaka fish, affecting egg production, feeding behavior, and increasing larval mortality.
  • The study highlights the need for further investigation into the chronic effects of DPH on aquatic life, given its potential risks in natural water bodies.
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Novel role of homogalacturonan region of pectin in disrupting the interaction between fibronectin and integrin β1.

Carbohydr Polym

July 2024

The United Graduate School of Agricultural Science, Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan; Department of Applied Life Science, Faculty of Applied Biological Sciences, Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan; Preemptive Food Research Center (PFRC), Gifu University Institute for Advanced Study, 1-1 Yanagido, Gifu 501-1193, Japan; Institute for Glyco-core Research (iGCORE), Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan. Electronic address:

Pectin interacts with fibronectin (FN), a modular protein in the extracellular matrix. This interaction is significant as FN plays a pivotal role by binding to the receptor integrin α5β1. However, the molecular mechanism underlying the pectin-FN interaction and its impact on integrin binding remains unknown.

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Equol (4',7-isoflavandiol) has attracted considerable attention for its potential efficacy in treating hormonal diseases. In this study we collected samples from healthy Japanese individuals (n = 91) to observe the relationship between the abundance of equol-producing bacteria in their faeces and the concentration of equol in their urine. Quantitative polymerase chain reaction (qPCR) targeting the dihydrodaidzein reductase gene (dhdr) was used to detect equol-producing bacteria.

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Corrigendum to "Distinctive domains and activity regulation of core fucosylation enzyme FUT8" [BBA General Subjects 1868 (2024)/130561].

Biochim Biophys Acta Gen Subj

June 2024

The United Graduate School of Agricultural Science, Gifu University, Gifu 501-1193, Japan; Institute for Glyco-core Research (iGCORE), Gifu University, Gifu 501-1193, Japan. Electronic address:

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Worldwide forest surveys reveal forty-three new species in major Clade 2 with fundamental implications for the evolution and biogeography of the genus and global plant biosecurity.

Stud Mycol

March 2024

Mendel University in Brno, Faculty of Forestry and Wood Technology, Department of Forest Protection and Wildlife Management, Phytophthora Research Centre, 613 00 Brno, Czech Republic.

Article Synopsis
  • A study conducted between 1998 and 2020 identified 43 new species in diverse ecosystems across Europe, Asia, and the Americas, using genetic analysis to classify them into existing and new subclades within a major clade.
  • The evolutionary history of this clade includes separations before and after the breakup of Gondwana, leading to distinct groups with varying lifestyles, such as soilborne and aerial species.
  • High levels of hybridization were observed in some subclades, indicating that environmental and breeding systems may encourage the emergence of new species, revealing significant gaps in our understanding of potential pathogen threats to ecosystems.
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Article Synopsis
  • - Increased lactate levels from glycolysis are being studied as potential markers for metabolic changes in neurons, linked to a drop in brain pH, which has been associated with various neuropsychiatric disorders like schizophrenia and autism.
  • - Research shows that these pH and lactate changes are common across different animal models, including those for depression, epilepsy, and Alzheimer's disease, though findings vary, particularly within the autism spectrum.
  • - A large-scale analysis indicated that higher lactate levels correlate with worse working memory performance, suggesting that altered brain chemistry might reflect underlying conditions across multiple disorders.
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is an actinorhizal plant that coexists with the nitrogen-fixing actinomycete via nodules. It produces a variety of polyketides, including flavonoids, stilbenoids, and diarylheptanoids. These compounds have beneficial biological activities.

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Article Synopsis
  • - This study investigated how including 2% condensed tannins (CT) in goat diets affects rumen metabolism and fermentation, using barley and corn as control rations.
  • - Eight goats were fed different rations in a controlled experiment, and analyses showed that CT influenced purine, unsaturated fatty acid, and amino acid metabolism.
  • - The findings highlight a significant relationship between rumen bacterial populations and metabolic changes, suggesting that CT could be an effective strategy for enhancing rumen health and productivity.
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Glutathione (GSH) is required for various physiological processes in plants, including redox regulation and detoxification of harmful compounds. GSH also functions as a repository for assimilated sulfur and is actively catabolized in plants. In Arabidopsis, GSH is mainly degraded initially by cytosolic enzymes, γ-glutamyl cyclotransferase, and γ-glutamyl peptidase, which release cysteinylglycine (Cys-Gly).

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This study investigates the non-invasive monitoring of the endocrine ovarian activities of captive female golden takins () based on long-term fecal sex steroid hormone metabolite dynamics. Fecal progesterone (P) metabolite dynamics were monitored in nine females for 0.5-15 years between 2004 and 2022.

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Diabetes is caused by abnormal glucose metabolism, and muscle, the largest tissue in the human body, is largely involved. Urolithin A (UroA) is a major intestinal and microbial metabolite of ellagic acid and ellagitannins and is found in fruits such as strawberry and pomegranate. In this present study, we investigated the antidiabetic effects of UroA in L6 myotubes and in KK-A/Ta, a mouse model of type 2 diabetes (T2D).

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, an agricultural pest, is occasionally infected by A strain present in is associated with cytoplasmic incompatibility (CI) effects, leading to the death of embryos resulting from incompatible crosses between antibiotic-treated or naturally -free strain females and -infected males. In this study, high-throughput sequencing of hypervariable rRNA genes was employed to characterize the bacterial community in -infected without antibiotic treatment. The analysis revealed that dominates the bacterial community in , with minor presence of , , and .

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The inflorescence (spadix) of skunk cabbage (Symplocarpus renifolius) is strongly thermogenic and can regulate its temperature at around 23 °C even when the ambient temperature drops below freezing. To elucidate the mechanisms underlying developmentally controlled thermogenesis and thermoregulation in skunk cabbage, we conducted a comprehensive transcriptome and metabolome analysis across 3 developmental stages of spadix development. Our RNA-seq analysis revealed distinct groups of expressed genes, with selenium-binding protein 1/methanethiol oxidase (SBP1/MTO) exhibiting the highest levels in thermogenic florets.

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Article Synopsis
  • - The study investigates how treating corn with 5% lactic acid (LA) affects its nutritional content and bacterial composition during rumen fermentation compared to untreated corn.
  • - Results indicate that LA treatment reduces certain nutrients in corn (like dry matter and water-soluble carbohydrates) while increasing resistant starch, and alters bacterial populations in the rumen.
  • - The findings suggest that lactic acid treatment can enhance the beneficial effects of corn on ruminants by changing nutrient composition and microbial activity during fermentation.
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Expression of Relaxin Family Peptide Receptors 1 and 3 in the Ovarian Follicle of Japanese Quail.

J Poult Sci

February 2024

United Graduate School of Agricultural Science, Gifu University, 1-1 Yanagido, Gifu 501-1193, Japan.

In our previous studies, we demonstrated that the primary source of relaxin 3 (RLN3) in Japanese quail is ovarian granulosa cells. Although several relaxin family peptide (RXFP) receptors have been sequenced, the intricacies of these receptors in avian species remain insufficiently clarified. Therefore, we assessed the expression of RXFP receptors, RXFP1 and 3, in Japanese quail.

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