56 results match your criteria: "Tsukuba Center[Affiliation]"

Antioxidant cysteine and methionine derivatives show trachea disruption in insects.

PLoS One

October 2024

Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology (AIST), Hokkaido Center, Sapporo, Japan.

To prevent the deterioration of the global environment, the reduction of chemical pesticide use and the development of eco-friendly pest control technologies are urgent issues. Our recent study revealed that the production of reactive oxygen species (ROS) by dual oxidase (Duox) plays a pivotal role in stabilizing the tracheal network by intermediating the tyrosine cross-linking of proteins that constitute trachea. Notably, the formation of dityrosine bonds by ROS can be inhibited by the intake of an antioxidant cysteine derivative N-acetyl-L-cysteine (NAC), which can suppress insect respiration.

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Bioluminescence of ()-Cypridina Luciferin with Luciferase.

Int J Mol Sci

February 2024

Biomedical Research Institute, AIST, Kansai Center, 1-8-31 Midorigaoka, Ikeda 563-8577, Japan.

Cypridina luciferin (CypL) is a marine natural product that functions as the luminous substrate for the enzyme luciferase (CypLase). CypL has two enantiomers, ()- and ()-CypL, due to its one chiral center at the -butyl moiety. Previous studies reported that ()-CypL or racemic CypL with CypLase produced light, but the luminescence of ()-CypL with CypLase has not been investigated.

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The MAT1 locus is required for microconidia-mediated sexual fertility in the rice blast fungus.

FEMS Microbiol Lett

January 2024

Department of Applied Biological Science, Faculty of Science and Technology, Tokyo University of Science, 2641 Yamazaki, Noda, Chiba 2788510, Japan.

Rice blast fungus (Pyricularia oryzae) is a heterothallic ascomycete that causes the most destructive disease in cultivated rice worldwide. This fungus reproduces sexually and asexually, and its mating type is determined by the MAT1 locus, MAT1-1 or MAT1-2. Interestingly, most rice-infecting field isolates show a loss of female fertility, but the MAT1 locus is highly conserved in female-sterile isolates.

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Functionally rejuvenated human papilloma virus-specific cytotoxic T lymphocytes (HPV-rejTs) generated from induced pluripotent stem cells robustly suppress cervical cancer. However, autologous rejT generation is time consuming, leading to difficulty in treating patients with advanced cancer. Although use of allogeneic HPV-rejTs can obviate this, the major obstacle is rejection by the patient immune system.

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Novel Glycolipid Chips with a Double Layer of Au Nanoparticles for Biological Toxin Detection.

ACS Omega

April 2023

Department of Applied Physics, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan.

Glycolipid chips having a double layer of Au nanoparticles are proposed for detection of biological toxins. The sugar-modified chips constitute an under and an upper layer of Au nanoparticles of 20-80 nm diameter on glass plates, and Au nanoparticles of each layer are linked with 1,8-octanedithiol by a self-assembled monolayer (SAM) technique. A tris-sialo glycosphingolipid, ganglioside GT1b, having lipoic amide at the sphingosine part was immobilized on the Au outside surface of the upper layer, and botulinum toxin (type A heavy chain) was detected by localized surface plasmon resonance (LSPR).

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Plant pathogens evade basal defense systems and attack different organs and tissues of plants. Genetic engineering of plants with genes that confer resistance against pathogens is very effective in pathogen control. Conventional breeding for disease resistance in ornamental crops is difficult and lagging relative to that in non-ornamental crops due to an inadequate number of disease-resistant genes.

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Assembly of Glycochips with Mammalian GSLs Mimetics toward the On-site Detection of Biological Toxins.

ACS Omega

December 2021

Department of Applied Physics, Graduate School of Engineering, Osaka University, 2-1 Yamadaoka, Suita, Osaka 565-0871, Japan.

According to our previously proposed scheme, each of three kinds of glycosphingolipid (GSL) derivatives, that is, lactosyl ceramide [Lac-Cer ()] and gangliosides [GM1-Cer () and GT1b-Cer ()], was installed onto the glass surface modified with Au nanoparticles. In the present study, we tried to apply microwave irradiation to promote their installing reactions. Otherwise, this procedure takes a lot of time as long as a conventional self-assembled monolayer (SAM) technique is applied.

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Insecticide resistance is one of the most serious problems in contemporary agriculture and public health. Although recent studies revealed that insect gut symbionts contribute to resistance, the symbiont-mediated detoxification process remains unclear. Here we report the in vivo detoxification process of an organophosphorus insecticide, fenitrothion, in the bean bug Riptortus pedestris.

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We generated dual-antigen receptor (DR) T cells from induced pluripotent stem cells (iPSCs) to mitigate tumor antigen escape. These cells were engineered to express a chimeric antigen receptor (CAR) for the antigen cell surface latent membrane protein 1 (LMP1; LMP1-CAR) and a T cell receptor directed to cell surface latent membrane protein 2 (LMP2), in association with human leucocyte antigen A24, to treat therapy-refractory Epstein-Barr virus-associated lymphomas. We introduced LMP1-CAR into iPSCs derived from LMP2-specific cytotoxic T lymphocytes (CTLs) to generate rejuvenated CTLs (rejTs) active against LMP1 and LMP2, or DRrejTs.

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The prognosis of Ewing sarcoma caused by fusion is poor, especially after metastasis. Although therapy with CTLs targeted against altered EWS/FLI1 sequences at the gene break/fusion site may be effective, CTLs generated from peripheral blood are often exhausted because of continuous exposure to tumor antigens. We addressed this by generating induced pluripotent stem cell (iPSC)-derived functionally rejuvenated CTLs (rejT) directed against the neoantigen encoded by the fusion gene.

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Individuals with Down syndrome (DS) commonly show unique pathological phenotypes throughout their life span. Besides the specific effects of dosage-sensitive genes on chromosome 21, recent studies have demonstrated that the gain of a chromosome exerts an adverse impact on cell physiology, regardless of the karyotype. Although dysregulated transcription and perturbed protein homeostasis are observed in common in human fibroblasts with trisomy 21, 18, and 13, whether and how this aneuploidy-associated stress acts on other cell lineages and affects the pathophysiology are unknown.

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Modeling of Frontotemporal Dementia Using iPSC Technology.

Int J Mol Sci

July 2020

Department of Biomedical Science, CHA Stem Cell Institute, CHA University, 335 Pangyo-ro, Bundang-gu, Seongnam-si, Gyeonggi-do 13488, Korea.

Frontotemporal dementia (FTD) is caused by the progressive degeneration of the frontal and temporal lobes of the brain. Behavioral variant FTD (bvFTD) is the most common clinical subtype of FTD and pathological subtypes of bvFTD are known as FTD-tau, transactive response (TAR) DNA-binding protein 43 (TDP-43), and fused in sarcoma (FUS). Pathological mechanisms of bvFTD are largely unknown.

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Immunotherapy utilizing induced pluripotent stem cell (iPSC) technology has great potential. Functionally rejuvenated cytotoxic T lymphocytes (CTLs) can survive long-term as young memory T cells in vivo, with continuous tumor eradication. Banking of iPSCs as an unlimited "off-the-shelf" source of therapeutic T cells may be feasible.

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Objectives: Alzheimer's disease (AD) is the most common neurodegenerative disease which is characterized by the formation of amyloid beta (Aβ) plaques and neurofibrillary tangles. These abnormal proteins induce disturbance in mitochondrial dynamics and defect in autophagy system. Since presenilin-1 (PS1) is a core component in γ-secretase complex, the mutations of PS1 gene cause the interference of γ-secretase activity and lead to the increased Aβ secretion.

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Host-symbiont specificity determined by microbe-microbe competition in an insect gut.

Proc Natl Acad Sci U S A

November 2019

Bioproduction Research Institute, National Institute of Advanced Industrial Science and Technology, Hokkaido Center, 062-8517 Sapporo, Japan;

Despite the omnipresence of specific host-symbiont associations with acquisition of the microbial symbiont from the environment, little is known about how the specificity of the interaction evolved and is maintained. The bean bug acquires a specific bacterial symbiont of the genus from environmental soil and harbors it in midgut crypts. The genus consists of over 100 species, showing ecologically diverse lifestyles, and including serious human pathogens, plant pathogens, and nodule-forming plant mutualists, as well as insect mutualists.

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Diamond has two crystallographically inequivalent sites in the unit cell. In doped diamond, dopant occupation in the two sites is expected to be equal. Nevertheless, preferential dopant occupation during growth under nonequilibrium conditions is of fundamental importance, for example, to enhance the properties of nitrogen-vacancy (N-V) centers; therefore, this is a promising candidate for a qubit.

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Burkholderia insecticola sp. nov., a gut symbiotic bacterium of the bean bug Riptortus pedestris.

Int J Syst Evol Microbiol

July 2018

Laboratory of Microbiology, Department of Biochemistry and Microbiology, Faculty of Sciences, Ghent University, K. L. Ledeganckstraat 35, B-9000 Ghent, Belgium.

A Gram-negative, aerobic, rod-shaped, non-spore-forming, motile bacterium, designated strain RPE64, was isolated from the gut symbiotic organ of the bean bug Riptortus pedestris, collected in Tsukuba, Japan, in 2007. 16S rRNA gene sequencing showed that this strain belongs to the Burkholderia glathei clade, exhibiting the highest sequence similarity to Burkholderia peredens LMG 29314 (100 %), Burkholderia turbans LMG 29316 (99.52 %) and Burkholderia ptereochthonis LMG 29326 (99.

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Peptide Tag-Induced Horseradish Peroxidase-Mediated Preparation of a Streptavidin-Immobilized Redox-Sensitive Hydrogel.

Biomacromolecules

June 2016

Department of Chemistry and Biotechnology, School of Engineering, The University of Tokyo, 7-3-1 Hongo, Bunkyo-ku, Tokyo 113-8656, Japan.

Several methods have recently been reported for the preparation of redox-sensitive hydrogels using enzymatic reactions, which are useful for encapsulating sensitive materials such as proteins and cells. However, most of the reported hydrogels is difficult to add further function efficiently, limiting the application of the redox-sensitive hydrogels. In this study, peptide sequences of HHHHHHC and GGGGY (Y-tag) were genetically fused to the N- and C-termini of streptavidin (C-SA-Y), respectively, and C-SA-Y was mixed with horseradish peroxidase and thiol-functionalized 4-arm polyethylene glycol to yield a redox-sensitive C-SA-Y immobilized hydrogel (C-SA-Y gel).

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Multinuclear NMR studies on translational and rotational motion for two ionic liquids composed of BF4 anion.

J Phys Chem B

September 2012

National Institute of Advanced Industrial Science and Technology, AIST Tsukuba Center 2, Tsukuba 305-8568, Japan.

Two ionic liquids (ILs) based on the BF(4)(-) anion are studied by (1)H, (11)B, and (19)F NMR spectroscopy by measuring self-diffusion coefficients (D) and spin-lattice relaxation times (T(1)). The cations are 1-ethyl-3-methylimidazolium (EMIm) and 1-butyl-3-methylimidazolium (BMIm). Since two NMR nuclei ((11)B and (19)F) of BF(4)(-) exhibit narrow lines and high sensitivity, the (11)B and (19)F NMR measurements of D(BF4) and T(1)(BF(4)) were performed in a wide temperature range.

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Room temperature ionic liquids (ILs) are stable liquids composed of anions and cations. 1-ethyl-3-methyl-imidazolium (EMIm, EMI) is a popular and important cation that produces thermally stable ILs with various anions. In this study two amide-type anions, bis(trifluoro-methanesulfonyl)amide [N(SO(2)CF(3))(2), TFSA, TFSI, NTf(2), or Tf(2)N] and bis(fluorosulfonyl)amide [(N(SO(2)F)(2), FSA, or FSI] were investigated by multinuclear NMR spectroscopy.

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Temperature-dependent 11B spin-lattice relaxation time for BF4 and CF3BF3 anions in room-temperature ionic liquids.

Magn Reson Chem

January 2011

National Institute of Advanced Industrial Science and Technology (AIST), AIST Tsukuba Center, Tsukuba, Ibaraki 305-8565, Japan.

Temperature-dependent (11)B T(1) values were measured for the BF(4) anion and BF(3) in the CF(3)BF(3) anion in room-temperature ionic liquids (RTILs) composed of the cation N-diethyl-N-methyl-N-(2-methoxyethyl)ammonium (DEME). Including the lithium-salt-doped samples, two neat and two binary ionic liquids were studied. Arrhenius plots of the (11)B T(1) showed T(1) minima for BF(4) in the temperature range between 243 (or above freezing) and 373 K.

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Room-temperature ionic liquids (RTIL, IL) are stable liquids composed of anions and cations. N-methyl-N-propyl-pyrrolidinium (P(13), Py(13), PYR(13), or mppy) is an important cation and produces stable ILs with various anions. In this study two amide-type anions, bis(trifluoromethanesulfonyl)amide [N(SO(2)CF(3))(2), TFSA, TFSI, NTf(2), or Tf(2)N] and bis(fluorosulfonyl)amide [N(SO(2)F)(2), FSA, or FSI], were investigated.

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Molecular dynamics simulations of ionic liquids: cation and anion dependence of self-diffusion coefficients of ions.

J Phys Chem B

August 2009

National Institute of Advanced Industrial Science and Technology (AIST), Tsukuba Center, Tsukuba, Ibaraki 305-8568, Japan.

Molecular dynamics simulations of a series of ionic liquids [1-alkyl-3-methylimidazolium (alkyl = methyl, ethyl, butyl, hexyl, and octyl), 1-butylpyridinium, N-butyl-N,N,N-trimethylammonium and N-butyl-N-methylpyrrolidinium cations combined with a (CF(3)SO(2))(2)N(-) anion ([mmim][TFSA], [emim][TFSA], [bmim][TFSA], [C(6)mim][TFSA], [C(8)mim][TFSA], [bpy][TFSA], [(n-C(4)H(9))(CH(3))(3)N][TFSA], and [bmpro][TFSA]) and a 1-butyl-3-methylimidazolium combined with BF(4)(-), PF(6)(-), CF(3)CO(2)(-), CF(3)SO(3)(-), and (C(2)F(5)SO(2))(2)N(-) anions ([bmim][BF(4)], [bmim][PF(6)], [bmim][CF(3)CO(2)], [bmim][CF(3)SO(3)], and [bmim][BETA])] were carried out using the OPLS force field for ionic liquids. The force field was refined on the basis of ab initio molecular orbital calculations of isolated ions and experimental densities for four ionic liquids. The densities calculated for the 13 ionic liquids agreed with the experimental values within a 2% error.

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Role of PPARα in the control of torpor through FGF21-NPY pathway: From circadian clock to seasonal change in mammals.

PPAR Res

September 2012

Clock Cell Biology, Department of Biological Resources and Functions, National Institute of Advanced Industrial Science and Technology (AIST), 6-5 Tsukuba Center, 1-1 Higashi, Tsukuba, 305-8566, Japan.

In nature, hibernating animals encounter fasting, cold temperature and short day seasonally. Torpor is a state of decreased physiological activity in an animal, usually characterized by a reduced body temperature and rate of metabolism to adapt such a severe environment. Ablation of the central clock synchronizer, the suprachiasmatic nucleus in brain, abolishes torpor, a hibernation-like state, implicating the circadian clock involved in this seasonal change.

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