49 results match your criteria: "The Institute of Biophysics[Affiliation]"

In Archaea, ether lipids play an essential role as the main building blocks of the cellular membrane. Recently, ether lipids have also been discovered in the domain of Bacteria, and the key enzymes that catalyze their synthesis, glycerol-1-phosphate dehydrogenase and heptaprenylglyceryl phosphate synthase, have been described. In Bacillales, heptaprenylglyceryl phosphate does not become linked to a second polyprenyl moiety like ether lipids in Archaea but is dephosphorylated and acetylated.

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The microRNA miR-124 suppresses seizure activity and regulates CREB1 activity.

Expert Rev Mol Med

March 2016

Department of Neurology,Chongqing Key Laboratory of Neurology, The First Affiliated Hospital of Chongqing Medical University,1 Youyi Road,Chongqing 400016,China.

miR-124, a brain-specific microRNA, was originally considered as a key regulator in neuronal differentiation and the development of the nervous system. Here we showed that miR-124 expression was suppressed in patients with epilepsy and rats after drug induced-seizures. Intrahippocampal administration of a miR-124 duplex led to alleviated seizure severity and prolonged onset latency in two rat models (pentylenetetrazole- and pilocarpine-induced seizures), while miR-124 inhibitor led to shortened onset latency in pilocarpine-induced seizure rat models.

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The small intestine is void of aquaporins adept at facilitating vectorial water transport, and yet it reabsorbs ∼8 liters of fluid daily. Implications of the sodium glucose cotransporter SGLT1 in either pumping water or passively channeling water contrast with its reported water transporting capacity, which lags behind that of aquaporin-1 by 3 orders of magnitude. Here we overexpressed SGLT1 in MDCK cell monolayers and reconstituted the purified transporter into proteoliposomes.

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Structural Basis of the Interaction between Tuberous Sclerosis Complex 1 (TSC1) and Tre2-Bub2-Cdc16 Domain Family Member 7 (TBC1D7).

J Biol Chem

April 2016

From the Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China, the Department of Biological Structure, University of Washington, Seattle, Washington 98195,

Mutations in TSC1 or TSC2 cause tuberous sclerosis complex (TSC), an autosomal dominant disorder characterized by the occurrence of benign tumors in various vital organs and tissues. TSC1 and TSC2, the TSC1 and TSC2 gene products, form the TSC protein complex that senses specific cellular growth conditions to control mTORC1 signaling. TBC1D7 is the third subunit of the TSC complex, and helps to stabilize the TSC1-TSC2 complex through its direct interaction with TSC1.

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Triacylglycerols (TGs) stored in lipid droplets (LDs) are hydrolyzed in a highly regulated metabolic process called lipolysis to free fatty acids that serve as energy substrates for β-oxidation, precursors for membrane lipids and signaling molecules. Comparative gene identification-58 (CGI-58) stimulates the enzymatic activity of adipose triglyceride lipase (ATGL), which catalyzes the hydrolysis of TGs to diacylglycerols and free fatty acids. In adipose tissue, protein-protein interactions between CGI-58 and the LD coating protein perilipin 1 restrain the ability of CGI-58 to activate ATGL under basal conditions.

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Correcting the processing of ΔF508-CFTR, the most common mutation in cystic fibrosis, is the major goal in the development of new therapies for this disease. Here, we determined whether ΔF508 could be rescued by a combination of small-molecule correctors, and identified the mechanism by which correctors rescue the trafficking mutant of cystic fibrosis transmembrane conductance regulator (CFTR). We transfected COS-7 cells with ΔF508, created HEK-293 stably expressing ΔF508, and utilized CFBE41o(-) cell lines stably transduced with ΔF508.

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Article Synopsis
  • We studied the structure and function of YbiB, a protein from E. coli belonging to the uncharacterized TrpD2 family, revealing new insights into its binding properties and potential roles.
  • YbiB shows strong similarity to proteins involved in anthranilate metabolism and can bind nucleic acids with high affinity, but without specificity for sequence, suggesting it interacts cooperatively with DNA.
  • This protein forms a homodimer, meaning it has two binding sites, but exhibits negative cooperativity, leading to only one site binding DNA in lab experiments; it may play a role in the bacterial SOS response controlled by the LexA protein.
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The Rho GTPase Rac is crucially involved in controlling multiple B cell functions, including those regulated by the B cell receptor (BCR) through increased cytosolic Ca(2+). The underlying molecular mechanisms and their relevance to the functions of intact B cells have thus far remained unknown. We have previously shown that the activity of phospholipase Cγ2 (PLCγ2), a key constituent of the BCR signalosome, is stimulated by activated Rac through direct protein-protein interaction.

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The resistance of ovarian cancer to platinum-based chemotherapy is a critical issue in the clinical setting. The present study aimed to establish animal models to replicate this clinical condition, as well as to investigate the resistance mechanisms of ovarian cancer. A cisplatin (DDP)-resistant human ovarian cancer cell line, SKOV3/DDP, was screened, validated and injected subcutaneously into the neck of female nude mice.

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While engaged in protein transport, the bacterial translocon SecYEG must maintain the membrane barrier to small ions. The preservation of the proton motif force was attributed to (i) cation exclusion, (ii) engulfment of the nascent chain by the hydrophobic pore ring, and (iii) a half-helix partly plugging the channel. In contrast, we show here that preservation of the proton motif force is due to a voltage-driven conformational change.

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STIM1 and Orai1 represent the two molecular key components of the Ca(2+) release-activated Ca(2+) channels. Their activation involves STIM1 C terminus coupling to both the N terminus and the C terminus of Orai. Here we focused on the extended transmembrane Orai1 N-terminal (ETON, aa73-90) region, conserved among the Orai family forming an elongated helix of TM1 as recently shown by x-ray crystallography.

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Terminally-differentiated cells cease to proliferate and acquire specific sets of expressed genes and functions distinguishing them from less differentiated and cancer cells. Mature granulocytes show lobular structure of cell nuclei with highly condensed chromatin in which HP1 proteins are replaced by MNEI. These structural features of chromatin correspond to low level of gene expression and the loss of some important functions as DNA damage repair, shown in this work and, on the other hand, acquisition of a new specific function consisting in the release of chromatin extracellular traps in response to infection by pathogenic microbes.

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Nephronophthisis (NPHP) is the most frequent genetic cause of end-stage renal failure in children and young adults. NPHP8/RPGRIP1L is a novel ciliary gene that, when mutated, in addition to causing NPHP, also causes Joubert syndrome (JBTS) and Meckel syndrome (MKS). The exact function of NPHP8 and how defects in NPHP8 lead to human diseases are poorly understood.

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Cooperativeness of Orai cytosolic domains tunes subtype-specific gating.

J Biol Chem

March 2011

From the Institute of Biophysics, University of Linz, Altenbergerstrasse 69, 4040 Linz, Austria and. Electronic address:

Activation of immune cells is triggered by the Ca(2+) release-activated Ca(2+) current, which is mediated via channels of the Orai protein family. A key gating process of the three Orai channel isoforms to prevent Ca(2+) overload is fast inactivation, most pronounced in Orai3. A subsequent reactivation is a unique gating characteristic of Orai1 channels, whereas Orai2 and Orai3 currents display a second, slow inactivation phase.

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RNF152, a novel lysosome localized E3 ligase with pro-apoptotic activities.

Protein Cell

July 2010

Key Laboratory of Infection and Immunity of Chinese Academy of Sciences, the Institute of Biophysics, Beijing, 100101, China.

RING finger protein 152 (RNF152) is a novel RING finger protein and has not been well characterized. We report here that RNF152 is a canonical RING finger protein and has E3 ligase activity. It is polyubiqitinated partly through Lys-48-linked ubiquitin chains in vivo and this phenomenon is dependent on its RING finger domain and transmembrane domain.

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Molecular basis of Wnt activation via the DIX domain protein Ccd1.

J Biol Chem

March 2011

From the MOE Key Laboratory of Bioinformatics, School of Life Sciences, Tsinghua University, Beijing 100084, China,. Electronic address:

The Wnt signaling plays pivotal roles in embryogenesis and cancer, and the three DIX domain-containing proteins, Dvl, Axin, and Ccd1, play distinct roles in the initiation and regulation of canonical Wnt signaling. Overexpressed Dvl has a tendency to form large polymers in a cytoplasmic punctate pattern, whereas the biologically active Dvl in fact forms low molecular weight oligomers. The molecular basis for how the polymeric sizes of Dvl proteins are controlled upon Wnt signaling remains unclear.

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MDA5 is SUMOylated by PIAS2β in the upregulation of type I interferon signaling.

Mol Immunol

January 2011

Key Laboratory of Infection and Immunity of Chinese Academy of Sciences, the Institute of Biophysics, 15 Da Tun Road, Chaoyang District, Beijing 100101, China.

Retinoic acid-inducible protein I (RIG-I) and melanoma differentiation-associated gene 5 (MDA5) are cytosolic viral RNA sensors that induce type I interferon production (IFN). In this study, we found that MDA5 undergoes inducible SUMOylation by small ubiquitin-like modifier-1 (SUMO-1) in response to polyI:C stimulation. Enhanced SUMOylation of MDA5 by exogenously expressed SUMO-conjugating enzyme Ubc9 correlated with upregulation of IFN expression and repressed virus replication.

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Cell-cell contact formation governs Ca2+ signaling by TRPC4 in the vascular endothelium: evidence for a regulatory TRPC4-beta-catenin interaction.

J Biol Chem

February 2010

From the Institute of Pharmaceutical Sciences-Pharmacology and Toxicology, University of Graz, Universitätsplatz 2, 8010 Graz, Austria. Electronic address:

TRPC4 is well recognized as a prominent cation channel in the vascular endothelium, but its contribution to agonist-induced endothelial Ca(2+) entry is still a matter of controversy. Here we report that the cellular targeting and Ca(2+) signaling function of TRPC4 is determined by the state of cell-cell adhesions during endothelial phenotype transitions. TRPC4 surface expression in human microvascular endothelial cells (HMEC-1) increased with the formation of cell-cell contacts.

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Recent studies have identified STIM1 and Orai1 as essential and conserved components of the Ca2+ release-activated Ca2+ (CRAC) channel. However, the reason STIM1 exhibits different distributions in nematode Caenorhabditis elegans and in human cells before endoplasmic reticulum (ER) calcium store depletion has not been clarified. Compared to the diffuse ER distribution of human STIM1 (H.

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Interaction of Munc18 and Syntaxin in the regulation of insulin secretion.

Biochem Biophys Res Commun

August 2007

Joint Laboratory of the Institute of Biophysics & Huazhong University of Science and Technology, School of Life Science and Technology, Huazhong University of Science and Technology, Wuhan 430074, PR China.

Syntaxin1A and Munc18-1 play essential roles in exocytosis. However, the molecular mechanism and the functional roles of their interaction in insulin secretion remain to be explored. Using membrane capacitance measurement, we examine effect of overexpressing Munc18-1 on exocytosis in pancreatic beta cells.

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Role of H(abc) domain in membrane trafficking and targeting of syntaxin 1A.

Biochem Biophys Res Commun

July 2007

Joint Laboratory of the Institute of Biophysics & Huazhong University of Science and Technology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, China.

Membrane syntaxin plays essential roles in exocytosis in eukaryotic cells. The conservative H(abc) domain in plasma membrane syntaxins implies important roles for syntaxin targeting and function. Our previous study showed H(abc) domain was necessary for the trafficking and cluster distribution of syntaxin 1A on the plasma membrane.

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In the year 1986 the Clinical Department of the Institute of Biophysics of the Ministry of Health of the USSR was the main specialized center in the country for the treatment of radiation disease. More than 300 people involved into the Chernobyl nuclear power plant accident were submitted to a specialized clinical observation, and the acute radiation syndrome (ARS) was diagnosed in 115 of the patients. The author of the article worked as a chief of surgical team responsible for the radiation burns treatment.

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Sodium channel-mediated intrinsic mechanisms underlying the differences of spike programming among GABAergic neurons.

Biochem Biophys Res Commun

July 2006

State Key Lab for Brain and Cognitive Sciences, National Lab for Protein Sciences, The Institute of Biophysics, Chinese Academy of Sciences, Beijing 100101, China.

Neural codes to guide well-organized behavior are thought to be the programmed patterns of sequential spikes at central neurons, in which the coordinative activities of voltage-gated ion channels are involved. The attention has been paid to study the role of potassium channels in spike pattern; but it is not clear how the intrinsic mechanism mediated by voltage-gated sodium channels (VGSC) influences the programming of sequential spikes, which we investigated at GABAergic cerebellar Purkinje cells and hippocampal interneurons by patch-clamp recording in brain slices. Spike capacity is higher at Purkinje cells than interneurons in response to the given intensities of inputs, and is dependent on input intensity.

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A convenient method of aligning large DNA molecules on bare mica surfaces for atomic force microscopy.

Nucleic Acids Res

October 1998

The Institute of Chemistry, The Chinese Academy of Sciences, Beijing 100080, China and The Institute of Biophysics, the Chinese Academy of Sciences, Beijing 100171, China.

Large DNA molecules remain difficult to be imaged by atomic force microscopy (AFM) because of the tendency of aggregation. A method is described to align long DNA fibers in a single direction on unmodified mica to facilitate AFM studies. The clear background, minimal overstretching, high reproducibility and convenience of this aligning procedure make it useful for physical mapping of genome regions and the studies of DNA-protein complexes.

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