109 results match your criteria: "The Federal Research Center "Institute of Cytology and Genetics SB RAS"[Affiliation]"
Polymers (Basel)
November 2024
Icon Lab Gmbh Ltd., 1 Barrikad St., Nizhny Novgorod 603003, Russia.
Polymer heart valves are a promising alternative to bioprostheses, the use of which is limited by the risks of calcific deterioration of devitalized preserved animal tissues. This is especially relevant in connection with the increasingly widespread use of transcatheter valves. Advances in modern organic chemistry provide a wide range of polymers that can replace biological material in the production of valve prostheses.
View Article and Find Full Text PDFInt J Mol Sci
September 2024
The Federal Research Center, Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia.
Wild and cultivated relatives of wheat are an important source of genetic factors for improving the mineral composition of wheat. In this work, a wheat panel consisting of modern bread wheat varieties, landraces, and introgression lines with genetic material of the wheat species , , , and and the synthetic line was used to identify loci associated with the grain zinc (GZnC) and iron (GFeC) content. Using a BLINK model, we identified 31 and 73 marker-trait associations (MTAs) for GZnC and GFeC, respectively, of which 19 were novel.
View Article and Find Full Text PDFTransgenic Res
October 2024
Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia, 630090.
The SARS-CoV-2 pandemic has underscored the necessity for functional transgenic animal models for testing. Mouse lines with overexpression of the human receptor ACE2 serve as the common animal model to study COVID-19 infection. Overexpression of ACE2 under a strong ubiquitous promoter facilitates convenient and sensitive testing of COVID-19 pathology.
View Article and Find Full Text PDFMicrobiol Resour Announc
September 2024
Federal Research Center, Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia.
We report a genome of CpGV from the bioresource collection of the Federal Research Center of Biological Plant Protection "State Collection of Entomoacariphages and Microorganisms." Its sequence is 123,862 bp. The genome under study demonstrates a degree of similarity of more than 99% with reference NC_002816 from the NCBI RefSeq database.
View Article and Find Full Text PDFInt J Mol Sci
June 2024
Kurchatov Genomic Centre of Institute of Cytology and Genetics SB RAS, 630090 Novosibirsk, Russia.
granulovirus is a natural pathogen for that is used as a biocontrol agent of insect populations. The study of granulovirus virulence is of particular interest since the development of resistance in natural populations of has been observed during the long-term use of the Mexican isolate CpGV. In our study, we present the genomes of 18 CpGV strains endemic to southern Russia and from Kazakhstan, as well as a strain included in the commercial preparation "Madex Twin", which were sequenced and analyzed.
View Article and Find Full Text PDFInt J Mol Sci
May 2024
Epigenetics Laboratory, Department of Natural Sciences, Novosibirsk State University, 630090 Novosibirsk, Russia.
Dynamic changes in genomic DNA methylation patterns govern the epigenetic developmental programs and accompany the organism's aging. Epigenetic clock (eAge) algorithms utilize DNA methylation to estimate the age and risk factors for diseases as well as analyze the impact of various interventions. High-throughput bisulfite sequencing methods, such as reduced-representation bisulfite sequencing (RRBS) or whole genome bisulfite sequencing (WGBS), provide an opportunity to identify the genomic regions of disordered or heterogeneous DNA methylation, which might be associated with cell-type heterogeneity, DNA methylation erosion, and allele-specific methylation.
View Article and Find Full Text PDFInt J Mol Sci
April 2024
Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia.
The process of domestication, despite its short duration as it compared with the time scale of the natural evolutionary process, has caused rapid and substantial changes in the phenotype of domestic animal species. Nonetheless, the genetic mechanisms underlying these changes remain poorly understood. The present study deals with an analysis of the transcriptomes from four brain regions of gray rats (), serving as an experimental model object of domestication.
View Article and Find Full Text PDFBiomedicines
February 2024
Federal Research Center Institute of Cytology and Genetics SB RAS, Pr. Lavrentiev, 10, 630090 Novosibirsk, Russia.
Age-related macular degeneration (AMD) is an eye disease that is the leading cause of irreversible vision loss in people over 55 years of age [...
View Article and Find Full Text PDFInt J Mol Sci
January 2024
E. Meshalkin National Medical Research Center of the RF Ministry of Health, 15 Rechkunovskaya St., Novosibirsk 630055, Russia.
Among the vascular prostheses used for aortic replacement, 95% are woven or knitted grafts from polyester fibers. Such grafts require sealing, for which gelatin (Gel) is most often used. Sometimes antibiotics are added to the sealant.
View Article and Find Full Text PDFAdv Gerontol
January 2024
Research Institute of Internal and Preventive Medicine - Branch of Federal Research Center Institute of Cytology and Genetics SB RAS, 175/1 B. Bogatkova str., Novosibirsk 630089, Russian Federation, e-mail:
to study the association of relative leukocyte DNA telomere length with death from natural causes during a 15-year follow-up in a middle-aged and elderly Siberian population. Study of the association of the relative length of leukocyte telomeres (LTL) with fatal outcomes during a 15-year follow-up of a random population sample formed in 2003-2005 (n=9 360, 45-69 years old, Novosibirsk, HAPIEE project). The main group included the persons died from natural causes (except external) without a previous history of CVD and cancer (n=609); controls were stratified by sex and age (n=799).
View Article and Find Full Text PDFGenome Biol Evol
January 2024
Department of Biology, Lund University, 223 62 Lund, Sweden.
The evolution of gonochorism from hermaphroditism is linked with the formation of sex chromosomes, as well as the evolution of sex-biased and sex-specific gene expression to allow both sexes to reach their fitness optimum. There is evidence that sexual selection drives the evolution of male-biased gene expression in particular. However, previous research in this area in animals comes from either theoretical models or comparative studies of already old sex chromosomes.
View Article and Find Full Text PDFBiomedicines
November 2023
Federal Research Center Institute of Cytology and Genetics SB RAS, Pr. Lavrentiev, 10, 630090 Novosibirsk, Russia.
Background: Age-related macular degeneration (AMD) is the leading cause of late-onset blindness in elderly. The occurrence and development of AMD is a multifactorial complex process where autophagy plays an important role. The first-line drugs for neovascular AMD (nAMD) are inhibitors of VEGF, with up to 30% of patients having an incomplete response to treatment.
View Article and Find Full Text PDFMol Biol Evol
December 2023
Department of Molecular Genetics, Cell Biology and Bionformatics, The Federal Research Center Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia.
Whole genome duplication (WGD) is an evolutionary event resulting in a redundancy of genetic material. Different mechanisms of WGD, allo- or autopolyploidization, lead to distinct evolutionary trajectories of newly formed polyploids. Genome studies on such species are important for understanding the early stages of genome evolution.
View Article and Find Full Text PDFJ Integr Bioinform
September 2023
Federal Research Center Institute of Cytology and Genetics SB RAS, 630090 Novosibirsk, Russia.
PeerJ
October 2023
Laboratory of Plant Molecular Genetics and Cytogenetics, The Federal State Budgetary Institution of Science Federal Research Center Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, Novosibirsk, Russia.
Plants (Basel)
October 2023
Kurchatov Genomic Center, Institute of Cytology and Genetics, Siberian Branch of the Russian Academy of Sciences, 630090 Novosibirsk, Russia.
Soybean is a leguminous plant cultivated in many countries and is considered important in the food industry due to the high levels of oil and protein content in the beans. The high demand for soybeans and its products in the industry requires the expansion of cultivation areas. Despite climatic restrictions, West Siberia is gradually expanding its area of soybean cultivation.
View Article and Find Full Text PDFParasitol Res
December 2023
Institute of Tropical Medicine, University of Tübingen, Wilhelmstraße, 27 72074, Tübingen, Germany.
Opisthorchis felineus is a food-borne trematode which causes opisthorchiosis and affects mainly the liver and bile ducts of the liver with a possible risk of bile duct carcinogenesis resulting in cholangiocarcinoma. In Russia, O. felineus is mainly endemic in Western Siberia (Ob and Irtysh river basins) and occurs throughout the Volga, Kama, Don, and Dnepr river basins.
View Article and Find Full Text PDFInt J Mol Sci
August 2023
The Federal Research Center Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia.
The content and quality of gluten in wheat grain is a distinctive characteristic that determines the final properties of wheat flour. In this study, a genome-wide association study (GWAS) was performed on a wheat panel consisting of bread wheat varieties and the introgression lines (ILs) obtained via hybridization with tetraploid wheat relatives. A total of 17 stable quantitative trait nucleotides (QTNs) located on chromosomes 1D, 2A, 2B, 3D, 5A, 6A, 7B, and 7D that explained up to 21% of the phenotypic variation were identified.
View Article and Find Full Text PDFInt J Mol Sci
April 2023
E. Meshalkin National Medical Research Center, RF Ministry of Health, 15 Rechkunovskaya St., 630055 Novosibirsk, Russia.
Int J Mol Sci
April 2023
Institute of Strength Physics and Materials Science SB RAS, 2/4, Akademichesky Ave., 634055 Tomsk, Russia.
This paper focuses on the surface modification of the Ti-6Al-4V alloy substrate via a-C:H:SiO coating deposition. Research results concern the a-C:H:SiO coating structure, investigated using transmission electron microscopy and in vitro endothelization to study the coating. Based on the analysis of the atomic radial distribution function, a model is proposed for the atomic short-range order structure of the a-C:H:SiO coating, and chemical bonds (C-O, C-C, Si-C, Si-O, and Si-Si) are identified.
View Article and Find Full Text PDFBiomedicines
January 2023
Federal Research Center Institute of Cytology and Genetics SB RAS, Pr. Lavrentiev, 10, 630090 Novosibirsk, Russia.
Age-related macular degeneration (AMD) is the leading cause of irreversible visual impairment worldwide. The development of AMD is associated with inflammation, oxidative stress, and progressive proteostasis imbalance, in the regulation of which c-Jun N-terminal kinases (JNK) play a crucial role. JNK inhibition is discussed as an alternative way for prevention and treatment of AMD and other neurodegenerative diseases.
View Article and Find Full Text PDFInt J Mol Sci
January 2023
Scientific-Research Institute of Neurosciences and Medicine, 630117 Novosibirsk, Russia.
Dietary composition substantially determines human health and affects complex diseases, including obesity, inflammation and cancer. Thus, food supplements have been widely used to accommodate dietary composition to the needs of individuals. Among the promising supplements are dietary phospholipids (PLs) that are commonly found as natural food ingredients and as emulsifier additives.
View Article and Find Full Text PDFNucleic Acids Res
February 2023
Research Centre for Medical Genetics, Moscow, Russia.
An increasing number of studies emphasize the role of non-coding variants in the development of hereditary diseases. However, the interpretation of such variants in clinical genetic testing still remains a critical challenge due to poor knowledge of their pathogenicity mechanisms. It was previously shown that variants in 5'-untranslated regions (5'UTRs) can lead to hereditary diseases due to disruption of upstream open reading frames (uORFs).
View Article and Find Full Text PDFInt J Mol Sci
December 2022
Institute of Cytology and Genetics SB RAS, Novosibirsk 630090, Russia.
A number of methods for extracting the DNA of maternally inherited obligate intracellular bacteria from an insect host and its subsequent purification have been described in previous scholarship. As is present in the hosts' organisms in rather low quantities, these techniques used to be quite labor-intensive. For this paper, we analyzed them in detail, searched for a possibility to simplify and accelerate the protocol, and proposed an easy and effective method for isolating DNA from with a purity sufficient for genomic sequencing.
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