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Feature selection and combination criteria for improving accuracy in protein structure prediction.

IEEE Trans Nanobioscience

June 2007

Department of Electrical and Control Engineering, National Chiao-Tung University, Hsin-chu, Taiwan and Computer Center of Chung Hua University, Hsin-chu, Taiwan.

The classification of protein structures is essential for their function determination in bioinformatics. At present, a reasonably high rate of prediction accuracy has been achieved in classifying proteins into four classes in the SCOP database according to their primary amino acid sequences. However, for further classification into fine-grained folding categories, especially when the number of possible folding patterns as those defined in the SCOP database is large, it is still quite a challenge.

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