249 results match your criteria: "TUBITAK-Marmara Research Center[Affiliation]"

In this work, we demonstrate that diverse aromatic compounds can be selectively chlorinated through the fine-tuning of the reactivity of sulfuryl chloride (SOCl) by organocatalysts. Acetonitrile has been identified to activate SOCl most strongly, thus enabling even chlorination of -xylene with high yields. 1,4-Dioxane effects chlorination of oxidation-labile aromatic compounds such as -cresol and 2-naphthol with high yields, 95% and 85%, respectively.

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Favipiravir, an RNA-dependent RNA polymerase (RdRp) inhibitor, is used to treat patients infected with influenza virus and most recently with SARS-CoV-2. However, poor accumulation of favipiravir in lung tissue following oral administration has required an alternative method of administration that directly targets the lungs. In this study, an inhalation solution of favipiravir at a concentration of 2 mg mL was developed and characterized for the first time.

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A broad range of evidence has confirmed that natural products and essential oils might have the potential to suppress COVID-19 infection. Therefore, this study aimed to develop an oral/throat spray formulation for prophylactic use in the oral cavity or help treatment modalities. Based on a reference survey, several essential oils, a cold-pressed oil, and propolis were selected, and cytotoxicity and antiviral activity of each component and the developed spray formulation were examined against severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) infection using Vero E6 cells.

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Soluble ACE2 (sACE2) decoys are promising agents to inhibit SARS-CoV-2, as their efficiency is unlikely to be affected by escape mutations. However, their success is limited by their relatively poor potency. To address this challenge, multimeric sACE2 consisting of SunTag or MoonTag systems is developed.

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Determination of PCDD/F and DL-PCB pollution levels, source appointment and risk assessment of surface sediments in dam lakes in Istanbul, Türkiye.

Environ Sci Pollut Res Int

December 2022

Department of Environmental Engineering, Faculty of Engineering, University of Kocaeli, İzmit, 41100, Kocaeli, Türkiye.

The current situation of the water resources of Istanbul, which is one of the important metropolises of Europe, should be known and constantly monitored by the reasons of the rapid increase in the city population, the acceleration of production-related industrial activities, the expansion of the city with construction activities, and the decrease in precipitation. The purpose of this study was to reveal the situations of surface sediments collected from Istanbul water reservoirs in terms of PCDD/Fs and DL-PCBs, to identify possible sources, and to conduct their ecological risk assessment. Total PCDD/Fs and DL-PCBs concentrations varied between 28.

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Acute inhibition of hospital and medical laboratory wastewater on activated sludge.

Environ Technol

January 2024

Faculty of Engineering, Department of Environmental Engineering, Suleyman Demirel University, Isparta, Turkey.

Sustainable operation is an essential challenge in many municipal wastewater treatment plants. Among many types of wastewater mixed in a sewer, healthcare wastewaters need special attention due to their hazardous substance content, which can be toxic to activated sludge. This study compared the acute inhibitory effects of healthcare wastewaters (HW) and medical laboratory wastewater (MLW) on conventional activated sludge (CAS) and membrane bioreactor (MBR).

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Poly(L-lactic acid)/poly(ethylene oxide) based composite electrospun fibers loaded with magnesium-aluminum layered double hydroxide nanoparticles.

Int J Biol Macromol

September 2022

Department of Materials Science and Engineering, Technology Faculty, Marmara University, Aydınevler, Maltepe, 34854, Istanbul, Turkey; TUBITAK-UME, Chemistry Group Laboratories, PO Box 74, 41470, Gebze, Kocaeli, Turkey. Electronic address:

Two types of MgAl layered double hydroxide nanoparticles, MgAl LDH, at Mg:Al ratio of 2:1 and 3:1were prepared and used as inorganic fillers to improve the mechanical properties of poly(lactic acid)/poly(ethylene oxide) (PLA/PEO) electrospun composite fibers. Their detailed structural characterization was performed using X-ray diffraction (XRD) and transmission electron spectroscopy (TEM) techniques. Spectroscopic, thermal, mechanical, and morphological properties of the electrospun composite fibers, and cell proliferation on their surface, were examined.

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In this study, a series of peripherally and non-peripherally tetra-substituted metal-free and zinc(II) phthalocyanines were successfully prepared in good yields by cyclotetramerization of the phthalonitrile derivative bearing a tetraethylene glycol methyl ether group at 3- and 4- positions. All newly synthesized compounds were characterized using spectroscopic methods, such as FT-IR, NMR, mass and UV-Vis spectroscopy. To determine the therapeutic potential of the synthesized phthalocyanines, the effects of the substitution pattern (peripheral and non-peripheral) and central metal atom on the photophysicochemical properties were investigated.

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Hazardous substances used and produced by different industrial activities pose a potential risk to the environment and to human health. Different physicochemical and/or biological processes are used in industrial wastewater treatment; these methods, however, may not be effective in removing these substances. This study was carried out to comparatively evaluate the removal of hazardous substances through conventional wastewater treatment processes that are used by major industries in Turkey.

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Article Synopsis
  • - MALT1 deficiency is a serious immune disorder leading to recurrent infections, chronic diarrhea, eczema, and growth issues in patients, which has not been extensively studied in large groups before.
  • - A study evaluated nine new patients alongside ten previously reported cases, revealing that most had normal T and NK cells but reduced B cells, with a high rate of severe complications and mortality linked to infections.
  • - The findings suggest that hematopoietic stem cell transplantation (HSCT) may improve survival rates, indicating it should be considered a primary treatment option for affected individuals early in life.
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In this study, we report a new design paradigm for an electrode preparation method that drastically improves the fast-charging capabilities of a graphite (Gt) anode by controlling the crystallographic orientation. The crystallographic orientation of the Gt electrode is achieved under a dynamic magnetic field using commercially available neodymium magnets. When the slurry of the Gt electrode is tape casted using the conventional method with no magnetic field, the crystallographic orientation is dominated with (002) planes along with other random planes.

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A review on the application of nanoporous zeolite for sanitary landfill leachate treatment.

Water Sci Technol

December 2021

Department of Environmental Engineering, Istanbul Technical University, Istanbul 34469, Turkey E-mail:

This review deals with low-cost nanoporous zeolites for the treatment of sanitary landfill leachate. Organic contaminants and ammoniacal nitrogen are significant parameters in landfill leachate treatment. Adsorption processes are regarded as promising alternative treatment options in this respect.

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Article Synopsis
  • - Obesity in children is a serious genetic condition linked to various health risks, and understanding its molecular mechanisms through computational methods is crucial for diagnosis and treatment development.
  • - The study analyzed genetic characteristics of 126 children with severe, early-onset obesity and compared them with 76 healthy controls, identifying 15 key genes associated with obesity through next-generation sequencing (NGS) and bioinformatics.
  • - It was found that 12 non-synonymous pathogenic variants in genes such as ADIPOQ, ADRB2, and IRS1 could collectively influence the onset and severity of obesity in these children.
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Istanbul needs to be protected and constantly monitored water resources due to its increasing population and the decrease in precipitation. This study aims to comprehensively reveal surface sediments collected from reservoirs that supply water to Istanbul concerning POPs (PAHs, PCBs, and OCPs) and heavy metals; to identify possible sources of PAHs, and conduct their ecological risk assessment. Pollution indices in this study were used as contamination degree (CD) contamination factor (CF), geoaccumulation index (I), pollution load index (PLI) and Sediment Quality Guidelines (SQGs).

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A study of inline chemical coagulation/precipitation-ceramic microfiltration and nanofiltration for reverse osmosis concentrate minimization and reuse in the textile industry.

Water Sci Technol

November 2021

Department of Environmental Engineering, Gebze Technical University, Çayırova 41400, Kocaeli, Turkey E-mail: Department of Environmental Engineering, Kyrgyz-Turkish Manas University, Bishkek, Kyrgyzstan.

Reverse osmosis concentrate (ROC) is one of the major drawbacks in membrane treatment technologies specifically due to the scale-forming ions. It is important to remove these ions from ROC to enhance total water recovery and reuse in the textile industry that is the largest water-consumer and polluter industry. In this work, coagulation/high pH precipitation (CP) integrated with ceramic microfiltration (CMF) was studied as a pre-treatment method followed by nanofiltration (NF) to increase the efficiency of water recovery.

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The neutralization effect of montelukast on SARS-CoV-2 is shown by multiscale in silico simulations and combined in vitro studies.

Mol Ther

February 2022

Department of Biophysics, Computational Biology and Molecular Simulations Laboratory, School of Medicine, Bahçeşehir University, Istanbul, Turkey; Faculty of Science and Letters, Tokat Gaziosmanpaşa University, Tokat, Turkey.

Small molecule inhibitors have previously been investigated in different studies as possible therapeutics in the treatment of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2). In the current drug repurposing study, we identified the leukotriene (D4) receptor antagonist montelukast as a novel agent that simultaneously targets two important drug targets of SARS-CoV-2. We initially demonstrated the dual inhibition profile of montelukast through multiscale molecular modeling studies.

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The present study was objected to investigate the effect of hazelnut supplemented diet on the levels of oxidative stress and fertility parameters against doxorubicin-induced testicular and epididymal tissue damage of male rats. Rats were randomly divided into four groups (each n = 8), namely control group (CG), doxorubicin group (DG), doxorubicin + hazelnut group (DHG), and doxorubicin + vitamin E group (DEG). This is the first study designed using DHG.

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In this study, reduced graphene oxide (rGO) was prepared using a green ultrasonic microwave assisted method and investigated rGO based non-enzymatic electrochemical sensor for detecting a synthetic fungicide as a propamocarb (PM) pesticide. The rGO-based sensor exhibited rapid response within 1 min, low detection limit of 0.6 μM and wide linear range of (1-5) μM with a high sensitivity of 101.

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Ceramic membrane overview and applications in textile industry: a review.

Water Sci Technol

September 2021

Department of Environmental Engineering, Istanbul Technical University, Istanbul 34467, Turkey E-mail: National Research Center on Membrane Technologies, Istanbul Technical University, Maslak, Istanbul 34469, Turkey.

The importance of water recovery and reuse is increasing day by day. Therefore, the use of advanced technologies is applied for the treatment and recovery of textile wastewater. The fact that ceramic membranes are resistant to the challenging characteristics of textile wastewater makes the use of ceramic membranes useful.

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Surface sediments from the Yeşilırmak River and the near coastal area in the Black Sea were collected using sediment traps to assess the spatial distributions of persistent organic pollutants and find their potential sources. Analyses were carried out to determine the concentrations of the persistent organic pollutants of seventeen polychlorinated dibenzo-p-dioxins and dibenzofurans, sixteen polycyclic aromatic hydrocarbons, seven polychlorinated biphenyls, and eight organochlorine pesticides using high-resolution gas chromatography-mass spectrometry and gas chromatography-tandem mass spectrometry systems. Analysis showed that the three main components of persistent organic pollutants (polychlorinated dibenzo-p-dioxins and dibenzofurans, polycyclic aromatic hydrocarbons, and organochlorine pesticides) primary sources are industrial activities.

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Asthma is a complex and heterogeneous inflammatory airway disease primarily characterized by airway obstruction, which affects up to 15% of the population in Westernized countries with an increasing prevalence. Descriptive laboratory and clinical studies reveal that allergic asthma is due to an immunological inflammatory response and is significantly influenced by an individual's genetic background and environmental factors. Due to the limitations associated with human experiments and tissue isolation, direct mouse models of asthma provide important insights into the disease pathogenesis and in the discovery of novel therapeutics.

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Ca-based porous and rough bioceramic surfaces were coated onto zirconium by micro-arc oxidation (MAO). Subsequently, the MAO-coated zirconium surfaces were covered with an antimicrobial chitosan layer via the dip coating method to develop an antimicrobial, bioactive, and biocompatible composite biopolymer and bioceramic layer for implant applications. Cubic ZrO, metastable CaZrO, and Ca(PO) were detected on the MAO surface by powder-XRD.

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The objective of the present study was to investigate the variations in some major primary (sugars and organic acids) and secondary (phenolics, β-carotene) metabolite contents during fruit development and ripening in two important apricot cultivars (Hacıhaliloğlu and Kabaaşı). The changes in the compositional properties of two apricot cultivars were monitored during fruit development with one-week intervals from 56 to 119 days after blossom. During fruit development, the contents of organic acids and phenolics decreased whereas that of sucrose and sorbitol increased.

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Wastewater treatment plants (WWTPs) may be a source of nuisance in neighbouring places due to hydrogen sulphide (HS) and BTEX (benzene, toluene, ethylbenzene, and xylenes) emissions. In this study, samples were collected from WWTP workplace ambient air and outdoor ambient air around one of the largest WWTPs in Istanbul with a capacity of 250,000 m/day to evaluate the effects of HS and BTEX emissions. Samples were collected in three seasons for 15-day durations: winter (November 2015), spring (May 2015), and summer (August 2016).

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Over the past decades, significant progress has been made in targeted cancer therapy. In precision oncology, molecular profiling of cancer patients enables the use of targeted cancer therapeutics. However, current diagnostic methods for molecular analysis of cancer are costly and require sophisticated equipment.

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