Modified RS-LAMP assay and use of lateral flow devices for rapid detection of Leifsonia xyli subsp. xyli.

Unlabelled: Ratoon stunt (RS) caused by bacterium Leifsonia xyli subsp. xyli (Lxx) results in substantial yield losses in sugarcane (Saccharum sp. L.

Herbicide targets and detoxification proteins in sugarcane: from gene assembly to structure modelling.

In a genome context, sugarcane is a classic orphan crop, in that no genome and only very few genes have been assembled. We have devised a novel exome assembly methodology that has allowed us to assemble and characterize 49 genes that serve as herbicide targets, safener interacting proteins, and members of herbicide detoxification pathways within the sugarcane genome. We have structurally modelled the products of each of these genes, as well as determining allelic, genomic, and RNA-Seq based polymorphisms for each gene.

Elucidating modes of activation and herbicide resistance by sequence assembly and molecular modelling of the Acetolactate synthase complex in sugarcane.

Acetolactate synthase (ALS) catalyzes the first portion of the biosynthetic pathway leading to the generation of branched-chain amino acids. As such it is essential for plant health and is a major target for herbicides. ALS is a very poorly characterized molecule in sugarcane.

Eggs of Ephestia kuehniella and Ceratitis capitata, and motile stages of the astigmatid mites Tyrophagus putrescentiae and Carpoglyphus lactis as factitious foods for Orius spp.

Several factitious foods were assessed for rearing the anthocorid predators Orius thripoborus (Hesse) and Orius naivashae (Poppius) (Hemiptera: Anthocoridae) in the laboratory. Developmental and reproductive traits of both Orius species were examined when offered frozen eggs of the Mediterranean flour moth, Ephestia kuehniella Zeller, frozen processed eggs of the medfly, Ceratitis capitata Wiedemann, or mixed motile stages of the astigmatid mites Tyrophagus putrescentiae (Schrank) or Carpoglyphus lactis (L). Whereas C.

Ecological Genetics and Host Range Expansion by Busseola fusca (Lepidoptera: Noctuidae).

The host plant range of pests can have important consequences for its evolution, and plays a critical role in the emergence and spread of a new pest outbreak. This study addresses the ecological genetics of the indigenous African maize stem borer, Busseola fusca (Fuller) (Lepidoptera: Noctuidae), in an attempt to investigate the evolutionary forces that may be involved in the recent host range expansion and establishment of this species in Ethiopian and southern African sugarcane. We used populations from Ethiopia, Zimbabwe, and South Africa to examine whether the host range expansion patterns shared by the Ethiopian and the southern African populations of B.

Description and phylogenetic placement of Beauveria hoplocheli sp. nov. used in the biological control of the sugarcane white grub, Hoplochelus marginalis, on Reunion Island.

On Reunion Island successful biological control of the sugarcane white grub Hoplochelus marginalis Fairmaire (Coleoptera: Melolonthidae) has been conducted for decades with strains from the entomopathogenic fungal genus Beauveria (Ascomycota: Hypocreales). A study based on morphological characters combined with a multisequence phylogenetic analysis of genes that encode the translation elongation factor 1-alpha (TEF1), RNA polymerase II largest subunit (RPB1), RNA polymerase II second largest subunit (RPB2) and the Bloc nuc intergenic region was carried out on Beauveria strains isolated on Reunion and Madagascar from H. marginalis.

A revision of the genus Conicofrontia Hampson (Lepidoptera, Noctuidae, Apameini, Sesamiina), with description of a new species: new insights from morphological, ecological and molecular data.

The aim of this study was to review the species of Conicofrontia Hampson, a small genus of noctuid stem borers (Noctuidae, Apameini) that is distributed in East and Southeastern Africa. We review the morphology of species in this group and provide new diagnoses and ecological data for five species. The following taxonomic changes are proposed: Hygrostola dallolmoi (Berio, 1973) (= Conicofrontia dallolmoi Berio, 1973) comb.

Improved nitrogen use efficiency in transgenic sugarcane: phenotypic assessment in a pot trial under low nitrogen conditions.

Sugarcane lines transformed with an alanine aminotransferase gene demonstrated an improved nitrogen use efficiency compared with untransformed controls in a pot trial under low nitrogen conditions.

Provision of nitrogen as ammonium rather than nitrate increases silicon uptake in sugarcane.

Silicon (Si) is important in mitigating abiotic and biotic plant stresses, yet many agricultural soils, such as those of the rainfed production areas of the South African sugar industry, are deficient in plant-available Si, making Si supplementation necessary. However, Si uptake by sugarcane (Saccharum spp. hybrids) is limited even where silicate amendments improve soil Si status.

Relationships between methods of variety adaptability and stability in sugarcane.

The identification and recommendation of superior genotypes is crucial for the growth of industrial crops, and sugarcane breeding performs a vital role by developing more productive cultivars. The study of genotype x environment interaction has been an essential tool in this process. Thereby, the purpose of this study was to investigate the relationship between methods of adaptability and stability in sugarcane.

Direct and indirect effects of development temperature on adult water balance traits of Eldana saccharina (Lepidoptera: Pyralidae).

For water balance physiology, prior thermal history may pre-condition individuals to be more sparing in their water consumption at a given temperature upon subsequent exposure, or alternatively, may relax constraints on water economy leading to more frivolous use of water at a later stage. Here we test these two major alternative hypotheses on the adult life stage of Eldana saccharina Walker (Lepidoptera: Pyralidae) by exposing them to different rearing temperatures (acclimation treatments) during immature stage development and comparing adult physiological performance (water loss rates, time to death) and water-balance related traits (body size, water content). Developmental acclimation at 20°C, 25°C or 30°C throughout the larval and pupal stage resulted in significant effects on water balance traits of two-day old adult male and female E.

Silicon reduces impact of plant nitrogen in promoting stalk borer (Eldana saccharina) but not sugarcane thrips (Fulmekiola serrata) infestations in sugarcane.

The stalk borer Eldana saccharina Walker (Lepidoptera: Pyralidae) is a major limiting factor in South African sugarcane production, while yield is also reduced by sugarcane thrips Fulmekiola serrata Kobus (Thysanoptera: Thripidae). Borer management options include appropriate nitrogen (N) and enhanced silicon (Si) nutrition; the effect of N on sugarcane thrips is unknown. We tested the effects of these nutrients, in combination with resistant (N33) and susceptible (N27) sugarcane cultivars, on E.

In vitro generation of somaclonal variant plants of sugarcane for tolerance to Fusarium sacchari.

KEY MESSAGE : A combination of in vitro culture and mutagenesis using ethyl methanesulfonate (EMS) followed by culture filtrate-mediated selection produced variant sugarcane plants tolerant and resistant to Fusarium sacchari. Eldana saccharina is a destructive pest of the sugarcane crop in South Africa. Fusarium sacchari PNG40 (a fungal strain harmful to E.

Beauveria brongniartii on white grubs attacking sugarcane in South Africa.

Beauveria brongniartii (Saccardo) Petch fungal infections were observed on the melolonthid Hypopholis sommeri Burmeister (Coleoptera: Scarabaeidae) at two sites (Harden Heights and Canema) in the sugarcane producing area of the northern KwaZulu-Natal Midlands of South Africa. To initially identify the disease-causing fungus, 17 different fluorescently-labelled microsatellite PCR primers were used to target 78 isolates of Beauveria spp. DNA.

Biomass accumulation in sugarcane: unravelling the factors underpinning reduced growth phenomena.

Constant radiation use efficiency throughout the entire sugarcane crop cycle is often assumed for crop yield forecasting and management purposes. However, several examples are known where the linear relationship between cumulative intercepted radiation and biomass accumulation becomes uncoupled at some stage, with the latter declining by 21% in one reported case. This slowdown in growth is commonly referred to as the reduced growth phenomenon (RGP).

Within-field damage and distribution patterns of the stalk borer, Eldana saccharina (Lepidoptera: Pyralidae), in sugarcane and a comparison with nematode damage.

The occurrence of Eldana saccharina (Lepidoptera: Pyralidae) was monitored in grids represented by plots in 12 nematicide trials in South African sugarcane fields. The trials encompassed a total of eight plant cane crops and 22 ratoon crops and were situated within commercial cane fields. Several measurements were made to characterize the damage caused by E.

Dating the origins of the maize-adapted strain of maize streak virus, MSV-A.

Maize streak virus (MSV), which causes maize streak disease (MSD), is one of the most serious biotic threats to African food security. Here, we use whole MSV genomes sampled over 30 years to estimate the dates of key evolutionary events in the 500 year association of MSV and maize. The substitution rates implied by our analyses agree closely with those estimated previously in controlled MSV evolution experiments, and we use them to infer the date when the maize-adapted strain, MSV-A, was generated by recombination between two grass-adapted MSV strains.

Supply and demand: sink regulation of sugar accumulation in sugarcane.

Sugarcane (Saccharum spp. hybrids) accumulates sucrose to high concentrations and, as a result, has been the focus of extensive research into the biochemistry and physiology of sucrose accumulation. Despite this, the relationship between source leaf photosynthetic activity and sucrose accumulation in the culm sink is not well understood.

Regulation of photosynthesis by sugars in sugarcane leaves.

In sugarcane, increased sink demand has previously been shown to result in increased photosynthetic rates that are correlated with a reduction in leaf hexose concentrations. To establish whether sink limitation of photosynthesis is a result of sugar accumulation in the leaf, excision and cold-girdling techniques were used to modify leaf sugar concentrations in pot-grown sugarcane. In excised leaves that were preincubated in darkness for 3h, sucrose accumulation was reduced but accumulated again upon transfer to the light, while hexose concentrations remained lower than in controls (7.

Detection and quantification of root-knot nematode (Meloidogyne javanica), lesion nematode (Pratylenchus zeae) and dagger nematode (Xiphinema elongatum) parasites of sugarcane using real-time PCR.

A number of different plant parasitic nematode species are found associated with sugarcane in South Africa. Of these, the root-knot nematode (Meloidogyne javanica), the lesion nematode (Pratylenchus zeae) and the dagger nematode (Xiphinema elongatum) are potentially the most damaging pests. Identification and enumeration of the number of these nematodes are necessary for providing advice to farmers as well as studying the effects of various treatments in field and glasshouse trials.

Silicon as a plant defence against insect herbivory: response to Massey, Ennos and Hartley.

1. Silicon (Si) has received increased attention as a nutrient capable of providing some measure of defence for plants against fungal pathogens, and insect and mammalian herbivores. 2.

Changes in photosynthetic rates and gene expression of leaves during a source-sink perturbation in sugarcane.

Background And Aims: In crops other than sugarcane there is good evidence that the size and activity of carbon sinks influence source activity via sugar-related regulation of the enzymes of photosynthesis, an effect that is partly mediated through coarse regulation of gene expression.

Methods: In the current study, leaf shading treatments were used to perturb the source-sink balance in 12-month-old Saccharum spp. hybrid 'N19' (N19) by restricting source activity to a single mature leaf.

Water stress augments silicon-mediated resistance of susceptible sugarcane cultivars to the stalk borer Eldana saccharina (Lepidoptera: Pyralidae).

Silicon (Si) can improve resistance of plants to insect attack and may also enhance tolerance of water stress. This study tested if Si-mediated host plant resistance to insect attack was augmented by water stress. Four sugarcane cultivars, two resistant (N21, N33) and two susceptible (N26, N11) to Eldana saccharina Walker were grown in a pot trial in Si-deficient river sand, with (Si+) and without (Si-) calcium silicate.

Sink strength regulates photosynthesis in sugarcane.

The relationship in sugarcane (Saccharum spp.) between photosynthetic source tissue and sink material was examined through manipulation of the sink:source ratio of field-grown Saccharum spp. hybrid cv.