251 results match your criteria: "Shubnikov Institute of Crystallography of Federal Scientific Research Centre "Crystallography and Photonics"[Affiliation]"
Langmuir
July 2023
N.N. Semenov Federal Research Center for Chemical Physics, Russian Academy of Sciences, 4 Kosygina Str., 119991 Moscow, Russia.
Vaporization is an important aspect of the performance and detection of energetic materials. While the traditional techniques concentrate on bulk property changes during sublimation, atomic force microscopy (AFM) offers the possibility to track particle volume changes under heating. Ideally, this will enable the investigation of chemicals that are challenging to study using conventional vaporization analysis methods, i.
View Article and Find Full Text PDFBiochemistry (Mosc)
May 2023
Shubnikov Institute of Crystallography, Federal Scientific Research Centre "Crystallography and Photonics", Russian Academy of Sciences, Moscow, 119333, Russia.
Structure and function of bacterial nucleoid is controlled by the nucleoid-associated proteins (NAP). In any phase of growth, various NAPs, acting sequentially, condense nucleoid and facilitate formation of its transcriptionally active structure. However, in the late stationary phase, only one of the NAPs, Dps protein, is strongly expressed, and DNA-protein crystals are formed that transform nucleoid into a static, transcriptionally inactive structure, effectively protected from the external influences.
View Article and Find Full Text PDFStability and narrow size distribution are among the main requirements that apply to drug formulations based on polymeric nanoparticles. In this study, we obtained a series of particles based on biodegradable poly(D,L-lactide)--poly(ethylene glycol) (P(D,L)LA--PEG) copolymers with varied hydrophobic P(D,L)LA block length from 50 to 1230 monomer units stabilized by poly(vinyl alcohol) (PVA) by a simple "oil-in-water" emulsion method. We found that nanoparticles of P(D,L)LA--PEG copolymers with relatively short P(D,L)LA block ( ≤ 180) are prone to aggregate in water.
View Article and Find Full Text PDFInt J Mol Sci
May 2023
Shubnikov Institute of Crystallography of Federal Scientific Research Centre "Crystallography and Photonics", Russian Academy of Sciences, Leninskiy Prospect, 59, 119333 Moscow, Russia.
In response to adverse environmental factors, cells actively produce Dps proteins which form ordered complexes (biocrystals) with bacterial DNA to protect the genome. The effect of biocrystallization has been described extensively in the scientific literature; furthermore, to date, the structure of the Dps-DNA complex has been established in detail in vitro using plasmid DNA. In the present work, for the first time, Dps complexes with genomic DNA were studied in vitro using cryo-electron tomography.
View Article and Find Full Text PDFMembranes (Basel)
April 2023
A.N. Frumkin Institute of Physical Chemistry and Electrochemistry of Russian Academy of Sciences, Leninsky Av. 31, bld. 4., 119071 Moscow, Russia.
High-temperature polymer-electrolyte membrane fuel cells (HT-PEM FC) are a very important type of fuel cell since they operate at 150-200 °C, allowing the use of hydrogen contaminated with CO. However, the need to improve stability and other properties of gas diffusion electrodes still hinders their distribution. Anodes based on a mat (self-supporting entire non-woven nanofiber material) of carbon nanofibers (CNF) were prepared by the electrospinning method from a polyacrylonitrile solution followed by thermal stabilization and pyrolysis of the mat.
View Article and Find Full Text PDFMol Ther Nucleic Acids
June 2023
Department of Chemistry and Biomolecular Sciences, University of Ottawa, 10 Marie-Curie, Ottawa, ON K1N6N5, Canada.
Here, we present DNA aptamers capable of specific binding to glial tumor cells , , and for visualization diagnostics of central nervous system tumors. We selected the aptamers binding specifically to the postoperative human glial primary tumors and not to the healthy brain cells and meningioma, using a modified process of systematic evolution of ligands by exponential enrichment to cells; sequenced and analyzed ssDNA pools using bioinformatic tools and identified the best aptamers by their binding abilities; determined three-dimensional structures of lead aptamers (Gli-55 and Gli-233) with small-angle X-ray scattering and molecular modeling; isolated and identified molecular target proteins of the aptamers by mass spectrometry; the potential binding sites of Gli-233 to the target protein and the role of post-translational modifications were verified by molecular dynamics simulations. The anti-glioma aptamers Gli-233 and Gli-55 were used to detect circulating tumor cells in liquid biopsies.
View Article and Find Full Text PDFBiochemistry (Mosc)
January 2023
Shubnikov Institute of Crystallography, Federal Scientific Research Centre "Crystallography and Photonics", Russian Academy of Sciences, Moscow, 119333, Russia.
The amino acid sequences of the coat proteins (CPs) of the potexviruses potato virus X (PVX) and alternanthera mosaic virus (AltMV) share ~40% identity. The N-terminal domains of these proteins differ in the amino acid sequence and the presence of the N-terminal fragment of 28 residues (ΔN peptide) in the PVX CP. Here, we determined the effect of the N-terminal domain on the structure and physicochemical properties of PVX and AltMV virions.
View Article and Find Full Text PDFPhys Chem Chem Phys
March 2023
Shubnikov Institute of Crystallography, Federal Scientific Research Centre 'Crystallography and Photonics' of Russian Academy of Sciences, 59 Leninskiy prospect, Moscow, 119333, Russia.
Reversible phase transformation in the Brodie graphite oxide-acetonitrile system, which is intercalation or release of part of the sorbed liquid from the interplanar space accompanied by an increase or a decrease in interplanar distances, is commonly observed in twice-oxidized materials. We observed this phenomenon for once-, twice- and thrice-oxidized materials using the EPR spin probe technique, DSC, and temperature programmed XRD. It was shown that all materials under study formed similar low temperature (LT) and high temperature (HT) swollen structures with acetonitrile.
View Article and Find Full Text PDFNanomaterials (Basel)
February 2023
Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry RAS, 117997 Moscow, Russia.
Recently, biodegradable polyelectrolyte multilayer capsules (PMC) have been proposed for anticancer drug delivery. In many cases, microencapsulation allows to concentrate the substance locally and prolong its flow to the cells. To reduce systemic toxicity when delivering highly toxic drugs, such as doxorubicin (DOX), the development of a combined delivery system is of paramount importance.
View Article and Find Full Text PDFJ Biol Chem
April 2023
Institute of Molecular Genetics of National Research Centre "Kurchatov Institute", Moscow, Russia. Electronic address:
Emfourin (M4in) is a protein metalloprotease inhibitor recently discovered in the bacterium Serratia proteamaculans and the prototype of a new family of protein protease inhibitors with an unknown mechanism of action. Protealysin-like proteases (PLPs) of the thermolysin family are natural targets of emfourin-like inhibitors widespread in bacteria and known in archaea. The available data indicate the involvement of PLPs in interbacterial interaction as well as bacterial interaction with other organisms and likely in pathogenesis.
View Article and Find Full Text PDFPharmaceutics
February 2023
Chemistry Faculty, M.V. Lomonosov Moscow State University, 119991 Moscow, Russia.
Improvement of the efficiency of drug penetration into the eye tissues is still an actual problem in ophthalmology. One of the most promising solutions is drug encapsulation in carriers capable of overcoming the cornea/sclera tissue barrier. Formulations on the base of antioxidant enzyme, superoxide dismutase 1 (SOD1), and an inhibitor of angiotensin-converting enzyme, enalaprilat, were prepared by simultaneous inclusion of both drugs into calcium phosphate (CaP) particles in situ with subsequent covering of the particles with 5 kDa chitosan.
View Article and Find Full Text PDFMolecules
February 2023
SEC "Technological Center", MIREA-Russian Technological University (RTU MIREA), 119454 Moscow, Russia.
Molecules
February 2023
Nikolaev Institute of Inorganic Chemistry SB RAS, 3 Lavrentiev Avenue, 630090 Novosibirsk, Russia.
Two novel heterobimetallic compounds {[Mn(SB)M(CN)]·4HO} (SB = N,N'-ethylenebis(5-trimethylammoniomethylsalicylideneiminate) based on orbitally degenerate cyanidometallates [Os(CN)] () and [Ru(CN)] () and Mn Schiff base complex were synthesized and characterized structurally and magnetically. Their crystal structures consist of electrically neutral, well-isolated chains composed of alternating [M(CN)] anions and square planar [Mn(SB)] cations bridged by cyanide groups. These -ion magnetic anisotropy of Mn centers.
View Article and Find Full Text PDFThe crystal structure of bacterial oligopeptidase B from (SpOpB) in complex with a chloromethyl ketone inhibitor was determined at 2.2 Å resolution. SpOpB was crystallized in a closed (catalytically active) conformation.
View Article and Find Full Text PDFColloids Surf B Biointerfaces
April 2023
Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow 117997, Russia; National Research Nuclear University Moscow Engineering Physics Institute, Moscow 115409, Russia. Electronic address:
For the biomedical applications of nanoparticles, the study of their structure is a major step towards understanding the mechanisms of their interaction with biological environment. Detailed structural analysis of particles' surface is vital for rational design of drug delivery systems. In particular, for core-shell or surface-modified nanoparticles surface structure can be described in terms of shell coating uniformity and shell thickness uniformity around the nanoparticle core.
View Article and Find Full Text PDFActa Crystallogr B Struct Sci Cryst Eng Mater
February 2023
Faculty of Physics, Lobachevsky State University of Nizhny Novgorod - National Research University, Gagarin av. 23, Nizhny Novgorod, 603022, Russian Federation.
J Biomol Struct Dyn
February 2023
Department of Biotechnology and Genetic Engineering, Faculty of Biological Sciences, Jahangirnagar University, Dhaka, Bangladesh.
Human cytomegalovirus (HCMV) is a widespread virus that can cause serious and irreversible neurological damage in newborns and even death in children who do not have the access to much-needed medications. While some vaccines and drugs are found to be effective against HCMV, their extended use has given rise to dose-limiting toxicities and the development of drug-resistant mutants among patients. Despite half a century's worth of research, the lack of a licensed HCMV vaccine heightens the need to develop newer antiviral therapies and vaccine candidates with improved effectiveness and reduced side effects.
View Article and Find Full Text PDFNanomaterials (Basel)
December 2022
Department of Materials Science, Lomonosov Moscow State University, 119991 Moscow, Russia.
Microheaters with long-term stability are crucial for the development of a variety of microelectronic devices operated at high temperatures. Structured Ta/Pt bilayers, in which the Ta sublayer ensures high adhesion of the Pt resistive layer, are widely used to create microheaters. Herein, a comprehensive study of the microstructure of Ta/Pt films using high-resolution transmission electron microscopy with local elemental analysis reveals the twofold nature of Ta after annealing.
View Article and Find Full Text PDFProtein Sci
February 2023
Laboratory for Molecular Structural Dynamics, Theory Department, National Institute of Chemistry, Ljubljana, Slovenia.
Nucleic Acids Res
January 2023
Institute of Protein Research RAS, Pushchino, Moscow Region 142290, Russia.
Polyribosomes, the groups of ribosomes simultaneously translating a single mRNA molecule, are very common in both, prokaryotic and eukaryotic cells. Even in early EM studies, polyribosomes have been shown to possess various spatial conformations, including a ring-shaped configuration which was considered to be functionally important. However, a recent in situ cryo-ET analysis of predominant regular inter-ribosome contacts did not confirm the abundance of ring-shaped polyribosomes in a cell cytoplasm.
View Article and Find Full Text PDFMembranes (Basel)
December 2022
Frumkin Institute of Physical Chemistry and Electrochemistry, Russian Academy of Sciences, Moscow 119071, Russia.
The results of a systematic study on the adsorption of polylysine molecules of different lengths on the surface of a 1,2-dimyristoyl--glycero-3-phospho-L-serine (DMPS) monolayer in the liquid (LE) and condensed (LC) states are presented. A compressibility diagram and the Volta potential were recorded with the Langmuir monolayer technique and further analyzed with the empirical approach. The structure of the monolayer films with adsorbed polypeptides was studied with synchrotron X-ray reflectometry.
View Article and Find Full Text PDFMaterials (Basel)
December 2022
Shubnikov Institute of Crystallography, Federal Scientific Research Centre "Crystallography and Photonics" of Russian Academy of Sciences, 119333 Moscow, Russia.
Whispering gallery mode (WGM) ZnO microlasers gain attention due to their high -factors and ability to provide low-threshold near-UV lasing. However, a detailed understanding of the optical gain mechanisms in such structures has not yet been achieved. In this work, we study the mechanisms of stimulated emission (SE) in hexagonal ZnO microrods, demonstrating high-performance WGM lasing with thresholds down to 10-20 kW/cm and -factors up to ~3500.
View Article and Find Full Text PDFChem Commun (Camb)
January 2023
Federal Research Center of Problems of Chemical Physics and Medicinal Chemistry RAS, Chernogolovka, Russia.
The first pentagonal-bipyramidal tungsten(III) complex (EtN)[W(DAPBH)(CN)] with a NO-type Schiff-base ligand and two apical cyanide groups was synthesized and characterized structurally and magnetically. The complex has a low-spin ( = 1/2) ground state and features unquenched orbital angular momentum = ±1 causing very strong Ising-type magnetic anisotropy.
View Article and Find Full Text PDFDalton Trans
January 2023
Institute of Problems of Chemical Physics RAS, Federal Research Center of Problems of Chemical Physics and Medical Chemistry RAS, Chernogolovka 142432, Russia.
This article overviews the current state and prospects of the concept of advanced single-molecule magnets (SMMs) based on low-spin ( = 1/2) pentagonal-bipyramidal (PBP) 4d and 5d complexes with unquenched orbital angular momentum. This approach is based on the unique property of PBP 4d and 5d complexes to cause highly anisotropic spin coupling of perfect uniaxial symmetry, -zizj - (xixj + yiyj), regardless of the local geometric symmetry. The M(4d/5d)-M(3d) exchange-coupled pairs in the apical positions of the PBP complexes produce Ising-type exchange interactions (|| > ||), which serve as a powerful source of uniaxial magnetic anisotropy of a SMM cluster.
View Article and Find Full Text PDFPolymers (Basel)
November 2022
Topchiev Institute of Petrochemical Synthesis, Russian Academy of Sciences, Leninskii pr. 29, Moscow 119991, Russia.
An experimental quasi-equilibrium phase diagram of the polyvinylidene fluoride (PVDF)-camphor mixture is constructed using an original optical method. For the first time, it contains a boundary curve that describes the dependence of camphor solubility in the amorphous regions of PVDF on temperature. It is argued that this diagram cannot be considered a full analogue of the eutectic phase diagrams of two low-molar-mass crystalline substances.
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