5 results match your criteria: "Shriner's Hospital for Children and UC Davis School of Medicine[Affiliation]"

Article Synopsis
  • Tandem repeat (TR) variation is linked to gene expression and rare genetic diseases, and there's a demand for better tools to analyze these variations across genomes.
  • The Tandem Repeat Genotyping Tool (TRGT) is introduced as a computational method designed to determine consensus sequences and methylation levels of TRs using PacBio HiFi sequencing data.
  • TRGT demonstrated high accuracy with a 98.38% Mendelian concordance and successfully identified known repeat expansions and their methylation status in samples, while also providing access to a database of TR sequences and methylation levels from 100 genomes.
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Objective: Fragile X-associated tremor/ataxia syndrome (FXTAS) is a late-onset progressive genetic neurodegenerative disorder that occurs in FMR1 premutation carriers. The temporal, spatial, and cell-type specific patterns of neurodegeneration in the FXTAS brain remain incompletely characterized. Intranuclear inclusion bodies are the neuropathological hallmark of FXTAS, which are largest and occur most frequently in astrocytes, glial cells that maintain brain homeostasis.

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Immunostaining is an antibody-based tool used to visualize proteins in tissue. Enzymes or fluorochromes conjugated to antibodies are used to detect proteins of interests. Fluorescent immunostaining can be used in human tissue, however due to the high autofluorescence of non-perfused human tissue, enzymatic immunostaining is better suited.

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Autism spectrum disorder is a neurodevelopmental condition characterized by deficits in sociability and communication and the presence of repetitive behaviors. How specific pathological alterations of the brain contribute to the clinical profile of autism spectrum disorder remains unknown. We previously found that a specific type of inhibitory interneuron is reduced in number in the autism spectrum disorder prefrontal cortex.

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Parvalbumin (PV) is a calcium binding protein expressed by inhibitory fast-spiking interneurons in the cerebral cortex. By generating a fast stream of action potentials, PV+ interneurons provide a quick and stable inhibitory input to pyramidal neurons and contribute to the generation of gamma oscillations in the cortex. Their fast-firing rates, while advantageous for regulating cortical signaling, also leave them vulnerable to metabolic stress.

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