537 results match your criteria: "School of Biochemical Engineering[Affiliation]"

The "" under this Perspective underline the importance of interdisciplinary collaboration and partnerships across several disciplines, such as medical science and technology, medicine, bioengineering, and computational approaches, in bridging the gap between research, manufacturing, and clinical applications. Effective communication is key to bridging team gaps, enhancing trust, and resolving conflicts, thereby fostering teamwork and individual growth toward shared goals. Drawing from the success of the COVID-19 vaccine development, we advocate the application of similar collaborative models in other complex health areas such as nanomedicine and biomedical engineering.

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Bone is a dynamic tissue that serves several purposes in the human body, including storing calcium, forming blood cells, and protecting and supporting the body's organs. Alkaline phosphatase (ALP) is secreted into the circulation by osteoblasts, the cells responsible for making bone. It attaches to the surface of osteoblast cells or matrix vesicles.

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The widespread application of pyraclostrobin (PYR), an important strobilurin fungicide with low utilization efficiency, urgently requires optimization for sustainable agriculture. In this study, nanoformulated PYR with nano-iron bismuthide (FeBi) was successfully prepared via flash nanoprecipitation, yielding spherical PYR/FeBi nanoparticles (NPs, Φ120 nm) with stable drug loading capacity (67.9%) and controlled release.

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The CHO VRC01 cell line produces an anti-HIV IgG1 monoclonal antibody containing N-linked glycans on both the Fab (variable) and Fc (constant) regions. Site-specific glycan analysis was used to measure the complex effects of cell culture process conditions on Fab and Fc glycosylation. Experimental data revealed major differences in glycan fractions across the two sites.

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Prevalence and characteristics of microplastic contamination in soft drinks and potential consumer exposure.

J Environ Manage

December 2024

Institute of Environmental Engineering and Management, College of Engineering, National Taipei University of Technology, Taipei, 10608, Taiwan. Electronic address:

Microplastics (MPs) contamination in human food is a growing concern due to potential health risks. Recent studies have indicated that MPs have been found in various human tissues and organs, including the placenta, lungs, liver, and blood. This highlights the importance of investigating the presence and concentration of MPs in food products, as it directly relates to human health and safety.

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Nanofibers, with their high surface area-to-volume ratio, elasticity, and mechanical strength, significantly enhance scaffold structures for skin tissue engineering. The present study introduces a unique method of combining solution blow spinning (SBS) and freeze casting to fabricate biomimetic hybrid nanofibroporous scaffolds (BHNS) using polycaprolactone (PCL) and chitosan (CH). The developed scaffolds mimic the fibrous porous natural extracellular matrix (ECM) architecture, promoting cell adhesion, proliferation, and matrix deposition.

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Hydrogen (H) energy has garnered significant attention due to its numerous advantages. Nonetheless, for future commercialization, it is imperative to screen and identify strains with enhanced H-producing capacities. In order to attain a high and consistent production performance, the conversion of biomass sources into H requires careful selection of the most appropriate H-producing bacteria.

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Optically active ultrabright imaging agents are shown to delineate tumor location with deep tissue visualization in pre noclinical tumor models. NanoGhosts (NGs) particles are reconstructed from the cell membrane and integrated with organic fluorophores to attain ultra-brightness for solid tumor imaging. Moreover, the integration of amphiphilic and lipophilic molecules reveals structural characteristics of NGs (≈70 nm), which also alter their brightness.

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Catalytic metal-organic frameworks (MOFs)-based sensor matrices can act synergistically with Au metallic nanostructures to generate amplified signal readouts by causing the electro-oxidation of the target analyte. Folic acid (FA), an essential water-soluble vitamin and a precursor for enzymes, requires timely and precise monitoring in the serum of individuals with varying clinical diagnoses. An attempt has been made in this direction through our work, where the rapid detection of FA through its oxidation at metal centers from hybrid nanomaterials is deployed for signal generation.

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We have earlier reported novel anti-leishmanial molecules, veratramine and hupehenine, targeting dephospho-coenzyme A kinase of the parasite. In our current investigation, we assessed the efficacy of these two steroidal alkaloids, veratramine and hupehenine, in combating the parasite. Contrary to expectations, our study did not detect the typical signs of apoptosis such as mitochondrial membrane potential loss and phosphatidylserine externalization.

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Multiscale modelling of bioprocess dynamics and cellular growth.

Microb Cell Fact

November 2024

School of Biochemical Engineering, Pontificia Universidad Católica de Valparaíso, Av. Brasil 2085, Valparaiso, 2340000, Chile.

Background: Fermentation processes are essential for the production of small molecules, heterologous proteins and other commercially important products. Traditional bioprocess optimisation relies on phenomenological models that focus on macroscale variables like biomass growth and protein yield. However, these models often fail to consider the crucial link between macroscale dynamics and the intracellular activities that drive metabolism and proteins synthesis.

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Culture conditions have a profound impact on therapeutic protein production and glycosylation, a critical therapeutic-quality attribute, especially for monoclonal antibodies (mAbs). While the critical culture parameter of pH has been known since the early 1990s to affect protein glycosylation and production, detailed glycan and metabolic characterization and mechanistic understanding are critically lacking. Here, Chinese Hamster Ovary (CHO) cells were grown in bioreactors at pH 6.

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Integrated computational characterization of valosin-containing protein double-psi β-barrel domain: Insights into structural stability, binding mechanisms, and evolutionary significance.

Int J Biol Macromol

December 2024

Laboratory for Computational Biology & Biomolecular Design, School of Biochemical Engineering, Indian Institute of Technology (BHU), Varanasi 221005, Uttar Pradesh, India. Electronic address:

Valosin-containing protein (VCP) plays a crucial role in various cellular processes, yet the molecular mechanisms and structural dynamics of its double-psi β-barrel (DPBB) domain, particularly in human, remain insufficiently explored. While previous studies have characterized the VCP_DPBB domain in other organisms, such as thermoplasma acidophilum and methanopyrus kandleri, its evolutionary conservation, binding potential, and stability in human require further investigation. To address this gap, we first employed all-atom molecular dynamics (AAMD) simulations to examine the structural dynamics of the human VCP_DPBB domain.

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Metal complexes activated by light can combat infections by triggering the photodynamic inactivation of bacteria. Herein, we report six mixed-ligand nickel(II) complexes with the formulation [Ni(NN)(L)] (1-6), where NN represents an N,N-donor phenanthroline ligand, specifically 1,10-phenanthroline (phen in 1, 2), dipyrido[3,2-d:2',3'-f]quinoxaline (dpq in 3, 4), and dipyrido[3,2-a:2',3'-c]phenazine (dppz in 5, 6), while L is an O,O donor bidentate ligand derived from catechol (cat, in 1, 3, 5) or esculetin (esc, in 2, 4, 6). The paramagnetic d octahedral complexes demonstrated good dark and photostability in the solution phase and exhibited significant light absorption in the visible (400-700 nm) region.

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Cancer is becoming a global threat, as the cancerous cells manipulate themselves frequently, resulting in mutants and more abnormalities. Early-stage and real-time detection of cancer biomarkers can provide insight into designing cost-effective diagnostic and therapeutic modalities. Nanoparticle and quantum dot (QD)-based approaches have been recognized as clinically relevant methods to detect disease biomarkers at the molecular level.

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Cellobiose 2-epimerase from Caldicellulosiruptor saccharolyticus (CsCE) can epimerize and isomerize lactose into epilactose and lactulose respectively. Competition between these reactions reactions has prompted the search for new enzymes to drive the reaction in one direction or the other. The isomerization and epimerization capacity of a novel mutant CsCE (CsCE H356N) was evaluated, obtaining a maximum lactulose yield of 64.

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Integrated all-atom and coarse-grained simulations uncover structural, dynamics and energetic shifts in SARS-CoV-2 JN.1 and BA.2.86 variants.

Acta Trop

December 2024

Laboratory for Computational Biology & Biomolecular Design, School of Biochemical Engineering, Indian Institute of Technology (BHU), Varanasi, Uttar Pradesh 221005, India. Electronic address:

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), responsible for the COVID-19 pandemic, is an enveloped, positive-stranded RNA virus that enters human cells by using its spike protein to bind to the human angiotensin-converting enzyme 2 (ACE2) receptor. Since its emergence, the virus has mutated, producing variants with increased transmissibility, immune evasion, and infectivity. The JN.

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Versatile Approaches of Quantum Dots in Biosensing and Imaging.

Wiley Interdiscip Rev Nanomed Nanobiotechnol

October 2024

School of Biochemical Engineering, Indian Institute of Technology (BHU), Varanasi, India.

Cancer is considered a formidable global health threat, despite substantial strides in diagnosis, detection, and therapeutic strategies. Remarkable progress has been achieved in these realms, yet the survival rates for cancer patients have persisted at suboptimal levels over decades. Acknowledging the need to address the ongoing challenges in cancer survival rates, research efforts are being made to push the boundaries of innovation in diagnostic techniques, bioimaging, and drug delivery technologies.

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Current Scenario and Global Perspective of Sustainable Algal Biofuel Production.

Recent Pat Biotechnol

October 2024

Department of Bioengineering, Integral University, Lucknow, Uttar Pradesh, 226026, India.

Article Synopsis
  • - Industrialization and globalization have heightened the demand for petroleum products, leading to greater fossil fuel use and greenhouse gas emissions, which calls for sustainable alternatives.
  • - Algae are emerging as a promising source for biofuels, regarded as third-generation biofuels due to their high biomass production and multiple derivable fuels, like bio-hydrogen and bio-ethanol, using various processing methods.
  • - Despite challenges like high cultivation costs, the potential of algae-derived biofuels can be enhanced through the use of byproducts, paving the way for more economical and environmentally sustainable energy solutions.
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Article Synopsis
  • Two dual-target inhibitors (ZINC000008876351 and ZINC000253403245) were discovered using advanced computational methods to inhibit critical enzymes FeSODA and TryR in Leishmania donovani, showing strong enzyme inhibition in low μM concentrations.
  • Flow cytometry results indicated that these compounds significantly increased reactive oxygen species (ROS) levels in treated cells, suggesting they effectively disrupt the parasite's antioxidant defense.
  • The inhibitors demonstrated dose-dependent anti-leishmanial activity against both stages of the parasite and showed a synergistic effect when combined with miltefosine, which is especially relevant due to rising resistance against miltefosine in some Leishmania strains.
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The exacerbation of plant fungal diseases necessitates the development of new fungicides to prevent outbreaks. In this study, five novel isoindoline-2-yl putrescines (ISPs) were synthesized, and their synthetic procedures and gram-scale preparation were explored. When tested at 50 μg mL, ISPs did not significantly inhibit mycelial growth on agar plates.

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Formate from THF-C1 metabolism induces the AOX1 promoter in formate dehydrogenase-deficient Komagataella phaffii.

Microb Biotechnol

October 2024

Microbial Processes and Interactions, TERRA Teaching and Research Centre, Gembloux Agro-Bio Tech, University of Liege, Gembloux, Belgium.

In Komagataella phaffii (Pichia pastoris), formate is a recognized alternative inducer to methanol for expression systems based on the AOX1 promoter (pAOX1). By disrupting the formate dehydrogenase encoding FDH1 gene, we converted such a system into a self-induced one, as adding any inducer in the culture medium is no longer requested for pAOX1 induction. In cells, formate is generated from serine through the THF-C1 metabolism, and it cannot be converted into carbon dioxide in a FdhKO strain.

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DDX3X dynamics, glioblastoma's genetic landscape, therapeutic advances, and autophagic interplay.

Med Oncol

October 2024

Biomolecular Engineering Laboratory, School of Biochemical Engineering, Indian Institute of Technology (BHU), Varanasi, 221005, India.

Glioblastoma is one of the most aggressive and deadly forms of cancer, posing significant challenges for the medical community. This review focuses on key aspects of Glioblastoma, including its genetic differences between primary and secondary types. Temozolomide is a major first-line treatment for Glioblastoma, and this article explores its development, how it works, and the issue of resistance that limits its effectiveness, prompting the need for new treatment strategies.

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Software Integrated Personalized Biosensing Device for Serum Creatinine Detection Based on Boron doped MXene Nanohybrid.

ACS Biomater Sci Eng

October 2024

Laboratory of Bio-Physio Sensors and Nanobioengineering School of Biochemical Engineering, Indian Institute of Technology (BHU) Varanasi, Varanasi, Uttar Pradesh 221005, India.

Article Synopsis
  • The rise in chronic kidney disease (CKD) cases, especially in underdeveloped and developing countries, highlights the need for effective and accessible diagnostic tools.
  • A new immunosensor has been developed using advanced materials like gold nanoparticles and MXene to specifically detect creatinine levels in serum samples, demonstrating high sensitivity and a broad detection range.
  • The immunosensor is paired with a user-friendly software called "CretCheck," enabling easy analysis of creatinine levels, making it suitable for use in primary health care facilities.
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