Photo-physical characterization of high triplet yield brominated fluoresceins by transient state (TRAST) spectroscopy.

Photo-induced dark transient states of fluorophores can pose a problem in fluorescence spectroscopy. However, their typically long lifetimes also make them highly environment sensitive, suggesting fluorophores with prominent dark-state formation yields to be used as microenvironmental sensors in bio-molecular spectroscopy and imaging. In this work, we analyzed the singlet-triplet transitions of fluorescein and three synthesized carboxy-fluorescein derivatives, with one, two or four bromines linked to the anthracence backbone.

A GPU-based computational framework that bridges neuron simulation and artificial intelligence.

Biophysically detailed multi-compartment models are powerful tools to explore computational principles of the brain and also serve as a theoretical framework to generate algorithms for artificial intelligence (AI) systems. However, the expensive computational cost severely limits the applications in both the neuroscience and AI fields. The major bottleneck during simulating detailed compartment models is the ability of a simulator to solve large systems of linear equations.

Long-read whole-genome analysis of human single cells.

Long-read sequencing has dramatically increased our understanding of human genome variation. Here, we demonstrate that long-read technology can give new insights into the genomic architecture of individual cells. Clonally expanded CD8+ T-cells from a human donor were subjected to droplet-based multiple displacement amplification (dMDA) to generate long molecules with reduced bias.

Complementarity-determining region clustering may cause CAR-T cell dysfunction.

Chimeric antigen receptor (CAR)-T cell therapy is rapidly advancing as cancer treatment, however, designing an optimal CAR remains challenging. A single-chain variable fragment (scFv) is generally used as CAR targeting moiety, wherein the complementarity-determining regions (CDRs) define its specificity. We report here that the CDR loops can cause CAR clustering, leading to antigen-independent tonic signalling and subsequent CAR-T cell dysfunction.

ThoughtSource: A central hub for large language model reasoning data.

Large language models (LLMs) such as GPT-4 have recently demonstrated impressive results across a wide range of tasks. LLMs are still limited, however, in that they frequently fail at complex reasoning, their reasoning processes are opaque, they are prone to 'hallucinate' facts, and there are concerns about their underlying biases. Letting models verbalize reasoning steps as natural language, a technique known as chain-of-thought prompting, has recently been proposed as a way to address some of these issues.

Numerical Analysis of GNSS Signal Outage Effect on EOPs Solutions Using Tightly Coupled GNSS/IMU Integration: A Simulated Case Study in Sweden.

The absence of a reliable Global Navigation Satellite System (GNSS) signal leads to degraded position robustness in standalone receivers. To address this issue, integrating GNSS with inertial measurement units (IMUs) can improve positioning accuracy. This article analyzes the performance of tightly coupled GNSS/IMU integration, specifically the forward Kalman filter and smoothing algorithm, using both single and network GNSS stations and the post-processed kinematic (PPK) method.

High-Performance Low-Voltage Transparent Metal-Semiconductor-Metal Ultraviolet Photodetectors Based on Ultrathin Gold Asymmetric Interdigitated Electrodes.

A high-performance, low-voltage, transparent, metal-semiconductor-metal ultraviolet (UV) photodetector (PD) is proposed and experimentally demonstrated, based on gold (Au) asymmetric interdigitated (aIDT) electrodes with thicknesses well below 10 nm. A 7-nm-thick Au film, with a visible transmittance of 80.4% and a sheet resistance of 11.

Introduction to Visual and Physiological Optics feature issue of .

This feature issue collects articles presented at the tenth Visual and Physiological Optics meeting (VPO2022), held August 29-31, 2022, in Cambridge, UK. This joint feature issue between and includes articles that cover the broad range of topics addressed at the meeting and examples of the current state of research in the field.

Comparison of optical myopia control interventions: effect on peripheral image quality and vision.

This study compares the effects on peripheral vision and image quality of four myopia control interventions: a) Perifocal spectacles/ArtOptica, b) Stellest spectacles/Essilor), c) MiyoSmart spectacles/Hoya and d) MiSight contact lenses/CooperVision. Five subjects participated with habitual or no correction as reference. Three techniques were used: 1) Hartmann-Shack sensors for wavefront errors, 2) double-pass imaging system for point-spread-functions (PSF), and 3) peripheral acuity evaluation.

Interplay between structural changes, surface states and quantum confinement effects in semiconducting MgSi and CaSi thin films.

techniques have been used to investigate structural changes in semiconducting MgSi and CaSi thin films (from 17 nm down to 0.2 nm corresponding to the 2D structure) along with band-gap variations due to quantum confinement. Cubic MgSi(111) thin films being dynamically stable at thicknesses () larger than 0.

Space-technological and architectural methodology and process towards design of long-term habitats for scientific human missions on mars.

Centered on the core idea of long duration habitat design for research crew on Mars, the Martian Habitat Units (MHUs) are designed as a cluster of 10 units each with the maximum capacity of 9 crew members to live and carry on with the local challenges of scientific and exploratory life, while enjoying their lives as intellectual, social individuals in the harsh environment of Mars for durations in the order of magnitude of several years. This approach to the concept of a living environment in sharp contradiction to that of a shelter with the minimal capabilities to meet the requirements of terrestrial life to the point of survival, has led the outcoming design to be a fulfilling environment for the inhabitants of the units to evolve and thrive culturally, while being on a years-long mission. This manuscript provides detailed insight on the of the aforementioned comprehensive design attempt with, but not limited to, the following core concerns: •The initial stand-point of such a design procedure relies on an ever increasing and comprehensive list of concerns, be it classically discussed in the literature and predictable, or unforeseen on the face of it, but to be prevented anyhow.

Calibration and Uncertainty Quantification for Single-Ended Raman-Based Distributed Temperature Sensing: Case Study in a 800 m Deep Coaxial Borehole Heat Exchanger.

Raman-based distributed temperature sensing (DTS) is a valuable tool for field testing and validating heat transfer models in borehole heat exchanger (BHE) and ground source heat pump (GSHP) applications. However, temperature uncertainty is rarely reported in the literature. In this paper, a new calibration method was proposed for single-ended DTS configurations, along with a method to remove fictitious temperature drifts due to ambient air variations.

Structural Analysis and Identity Confirmation of Anthocyanins in Extracts by Direct Injection Ion Mobility-Mass Spectrometry.

Anthocyanins are a subclass of plant-derived flavonoids that demonstrate immense structural heterogeneity which is challenging to capture in complex extracts by traditional liquid chromatography-mass spectrometry (MS)-based approaches. Here, we investigate direct injection ion mobility-MS as a rapid analytical tool to characterize anthocyanin structural features in red cabbage () extracts. Within a 1.

BATTERY 2030+ and its Research Roadmap: A Bibliometric Analysis.

In this bibliometric study, we analyze two of the six battery research subfields identified in the BATTERY 2030+ roadmap: Materials Acceleration Platform and Smart functionalities: Sensing. In addition, we analyze the entire research field related to BATTERY 2030+ as a whole. We (a) evaluate the European standing in the two subfields/the BATTERY 2030+ field in comparison to the rest of the world, and (b) identify strongholds of the two subfields/the BATTERY 2030+ field across Europe.

The Prolific Ternary System Pt/Sn/Nd: Insertion of Pt into the Structures of Sn/Nd Intermetallics Yields Structural Complexity and Wealth.

The understanding of structure and bonding in intermetallic phases still lags behind that of molecular compounds. For that reason, exploring intermetallic phases and identifying structural patterns and relationships are particularly important for closing this knowledge gap. In particular, here we report on the addition of increasing amounts of platinum to ∼2:1 mixtures of tin and neodymium, which yields eight ternary Pt/Sn/Nd compounds, four of which have not been reported before.

Identification and characterisation of MdUGT78T2 as a galactosyltransferase with dual activity on flavonol and anthocyanidin substrates in red-skinned apple fruit (Malus domestica L.).

Anthocyanidin and flavonol glycosides have been linked to the health-promoting effects associated with apple consumption. However, very few enzymes involved in flavonoid glycosylation have been characterised to date. Here, we present the identification and phylogenetic analysis of 234 putative glycosyltransferases involved in flavonoid biosynthesis, and detail the biochemical and structural characterisation of MdUGT78T2 as a strict galactosyltransferase involved in the formation of quercetin-3-O-galactoside and cyanidin-3-O-galactoside, the major glycoconjugates of flavonoids in apple.

Formation and Polymorphism of Semiconducting KSiH and Strategy for Metallization.

KSiH, crystallizing in the cubic KPtCl structure type (3̅), features unusual hypervalent SiH complexes. Here, the formation of KSiH at high pressures is revisited by in situ synchrotron diffraction experiments, considering KSiH as a precursor. At the investigated pressures, 8 and 13 GPa, KSiH adopts the trigonal (NH)SiF structure type (3̅1) upon formation.

Effective Organotin-Mediated Regioselective Functionalization of Unprotected Carbohydrates.

Regioselective functionalization of unprotected carbohydrates at a secondary OH group in the presence of primary OH groups based on the commonly used organotin-mediated reaction has been improved. We found that the preactivation of the dibutylstannylene acetal intermediate with tetrabutylammonium bromide in toluene is a key to the improved condition for the efficient, high-yielding, and regioselective tosylation, benzoylation, or benzylation of unprotected carbohydrates. The counteranion of tetrabutylammonium ion with a weak coordination ability plays a crucial role in the improved regioselective reactions.

Development of a model for radionuclide transport in streams for biosphere assessment purpose.

As a part of the overall safety assessment for a geological disposal of radioactive waste, models for different ecosystems are used to evaluate doses to humans and biota from possible radionuclide discharges to the biosphere. In previous safety assessments, transport modelling of radionuclides in running waters such as streams has been much simplified to the extent that only dilution of the inflow of radionuclides has been considered with no regard of any other interactions. Hyporheic exchange flow (HEF) is the flow of surface water in streams that enters the subsurface zone and, after some time, returns to the surface.

SUR7 deletion in s impacts extracellular vesicle features and delivery of virulence factors.

Extracellular vesicles (EVs) from human fungal pathogens have been implicated in fungal virulence, yet little is known about their role in the host-pathogen interaction. Progress has been hampered by the lack of a specific marker for fungal EVs that can be used to monitor EV isolation and tracking in biological systems. Here we report the effect of a gene knockout on the production, properties, and role of EVs in the virulence of .

Subcritical water extraction of Equisetum arvense biomass withdraws cell wall fractions that trigger plant immune responses and disease resistance.

Plant cell walls are complex structures mainly made up of carbohydrate and phenolic polymers. In addition to their structural roles, cell walls function as external barriers against pathogens and are also reservoirs of glycan structures that can be perceived by plant receptors, activating Pattern-Triggered Immunity (PTI). Since these PTI-active glycans are usually released upon plant cell wall degradation, they are classified as Damage Associated Molecular Patterns (DAMPs).

Energy response and spatial alignment of the perturbed electron gas.

We study the linear energy response of the uniform electron gas to an external harmonic perturbation with a focus on resolving different contributions to the total energy. This has been achieved by carrying out highly accurate ab initio path integral Monte Carlo (PIMC) calculations for a variety of densities and temperatures. We report a number of physical insights into effects such as screening and the relative importance of kinetic and potential energies for different wave numbers.

Weight a minute: The smaller and more immature, the more predictable the autonomic regulation?

Aim: To investigate the relation between autonomic regulation, measured using heart rate variability (HRV), body weight and degree of prematurity in infants. Further to assess utility to include body weight in a machine learning-based sepsis prediction algorithm.

Methods: Longitudinal cohort study including 378 infants hospitalised in two neonatal intensive care units.

Quantum version of the integral equation theory-based dielectric scheme for strongly coupled electron liquids.

A novel dielectric scheme is proposed for strongly coupled electron liquids, which handles quantum mechanical effects beyond the random phase approximation level and treats electronic correlations within the integral equation theory of classical liquids. The self-consistent scheme features a complicated dynamic local field correction functional and its formulation is guided by ab initio path integral Monte Carlo simulations. Remarkably, our scheme is capable of providing unprecedently accurate results for the static structure factor with the exception of the Wigner crystallization vicinity, despite the absence of adjustable or empirical parameters.

Surface tension models for binary aqueous solutions: a review and intercomparison.

The liquid-air surface tension of aqueous solutions is a fundamental quantity in multi-phase thermodynamics and fluid dynamics and thus relevant in many scientific and engineering fields. Various models have been proposed for its quantitative description. This Perspective gives an overview of the most popular models and their ability to reproduce experimental data of ten binary aqueous solutions of electrolytes and organic molecules chosen to be representative of different solute types.