Operationalizing risk-based cumulative effect assessments in the marine environment.

Ecosystem-based management requires an assessment of the cumulative effects of human pressures and environmental change. The operationalization and integration of cumulative effects assessments (CEA) into decision-making processes often lacks a comprehensive and transparent framework. A risk-based CEA framework that divides a CEA in risk identification, risk analysis and risk evaluation, could structure such complex analyses and facilitate the establishment of direct science-policy links.

Metabarcoding free-living marine nematodes using curated 18S and CO1 reference sequence databases for species-level taxonomic assignments.

High-throughput sequencing has the potential to describe biological communities with high efficiency yet comprehensive assessment of diversity with species-level resolution remains one of the most challenging aspects of metabarcoding studies. We investigated the utility of curated ribosomal and mitochondrial nematode reference sequence databases for determining phylum-specific species-level clustering thresholds. We compiled 438 ribosomal and 290 mitochondrial sequences which identified 99% and 94% as the species delineation clustering threshold, respectively.

A Review of Protocols for Fiducial Reference Measurements of Downwelling Irradiance for the Validation of Satellite Remote Sensing Data over Water.

This paper reviews the state of the art of protocols for the measurement of downwelling irradiance in the context of Fiducial Reference Measurements (FRM) of water reflectance for satellite validation. The measurement of water reflectance requires the measurement of water-leaving radiance and downwelling irradiance just above water. For the latter, there are four generic families of method, using: (1) an above-water upward-pointing irradiance sensor; (2) an above-water downward-pointing radiance sensor and a reflective plaque; (3) a Sun-pointing radiance sensor (sunphotometer); or (4) an underwater upward-pointing irradiance sensor deployed at different depths.

Dolichopodidae of riverbeds and springs in Croatia with an updated checklist of Croatia (Diptera).

Several invertebrate surveys in Croatia conducted between 2005 and 2014 and including; e.g., Plitvice Lakes, produced 123 bycatch samples of Dolichopodidae (Diptera) from 68 sampling sites collected at 36 localities in seven counties.

The quest for the identity of (Scopoli, 1763) reveals centuries of misidentifications (Diptera, Dolichopodidae).

Recently, a species of was collected in Greece that differs morphologically from the European species commonly presumed to be (Scopoli, 1763). Verification of the identity of the Greek species through comparison with 460 specimens of from 17 West Palaearctic and one Afrotropical country, and examination of existing type material, revealed that the species recognized as in northwestern Europe for over 250 years is actually (Becker, 1907), the other known species in the genus, which was originally described from Tunisia. Although the types of have been lost, a comparison of the distribution ranges of both species in Europe provided evidence that the species collected in Greece is conspecific with .

Modelling the marine eutrophication: A review.

In the frame of a national, joint scientific appraisal, 45 scientific French-speaking experts have been mandated in 2015-2016 by the French ministries of Environment and Agriculture to perform a global review of scientific literature dealing with the eutrophication phenomenon, in freshwater as well as in marine waters. This paper summarizes the main results of this review restricted to a sub-domain, the modelling approach of the marine eutrophication. After recalling the different aims pursued, an overview is given on the historical time course of this modelling effort, its world distribution and the various tools used.

How to avoid eutrophication in coastal seas? A new approach to derive river-specific combined nitrate and phosphate maximum concentrations.

Since 1950, increase in nitrogen (N) and phosphorus (P) river loadings in the North-East Atlantic (NEA) continental seas has induced a deep change in the marine coastal ecosystems, leading to eutrophication symptoms in some areas. In order to recover a Good Ecological Status (GES) in the NEA, as required by European Water Framework Directive (WFD) and Marine Strategy Framework Directive (MSFD), reductions in N- and P-river loadings are necessary but they need to be minimal due to their economic impact on the farming industry. In the frame of the "EMoSEM" European project, we used two marine 3D ecological models (ECO-MARS3D, MIRO&CO) covering the Bay of Biscay, the English Channel and the southern North Sea to estimate the contributions of various sources (riverine, oceanic and atmospheric) to the winter nitrate and phosphate marine concentrations.

Further consideration of the curvature of the Neandertal Femur.

Objectives: Neandertal femora are particularly known for having a marked sagittal femoral curvature. This study examined femoral curvature in Neandertals in comparison to a modern human population from Belgium by the use of three-dimensional (3D) quadric surfaces modeled from the bone surface. 3D models provide detailed information and enabled femoral curvature to be analyzed in conjunction with other morphological parameters.

Complex effect of projected sea temperature and wind change on flatfish dispersal.

Climate change not only alters ocean physics and chemistry but also affects the biota. Larval dispersal patterns from spawning to nursery grounds and larval survival are driven by hydrodynamic processes and shaped by (a)biotic environmental factors. Therefore, it is important to understand the impacts of increased temperature rise and changes in wind speed and direction on larval drift and survival.

Population genetic structure in Sabatieria (Nematoda) reveals intermediary gene flow and admixture between distant cold seeps from the Mediterranean Sea.

Background: There is a general lack of information on the dispersal and genetic structuring for populations of small-sized deep-water taxa, including free-living nematodes which inhabit and dominate the seafloor sediments. This is also true for unique and scattered deep-sea habitats such as cold seeps. Given the limited dispersal capacity of marine nematodes, genetic differentiation between such geographically isolated habitat patches is expected to be high.

Distinct genetic differentiation and species diversification within two marine nematodes with different habitat preference in Antarctic sediments.

Background: Dispersal ability, population genetic structure and species divergence in marine nematodes are still poorly understood, especially in remote areas such as the Southern Ocean. We investigated genetic differentiation of species and populations of the free-living endobenthic nematode genera Sabatieria and Desmodora using nuclear 18S rDNA, internal transcribed spacer (ITS) rDNA, and mitochondrial cytochrome oxidase I (COI) gene sequences. Specimens were collected at continental shelf depths (200-500 m) near the Antarctic Peninsula, Scotia Arc and eastern side of the Weddell Sea.

How different are the Kebara 2 ribs to modern humans?

This study analyses rib geometric parameters of individual ribs of 14 modern human subjects (7 males and 7 females) in comparison to the reconstructed ribs of the Kebara 2 skeleton which was taken from the reconstruction of a Neandertal thorax by Sawyer & Maley (2005). Three-dimensional (3D) models were segmented from CT scans and each rib vertex cloud was placed into a local coordinate system defined from the rib principal axes. Rib clouds were then analysed using best fitting ellipses of the external contours of the cross-section areas.

Parent, 1927 revisited, with two new synonyms (Diptera: Dolichopodidae).

On the basis of comparison between the female holotype of Dolichopus nimbatus Parent and the female paratype of D. balius Meuffels, and comparison of a male paratype of D. balius with the description of D.

Toxoplasma gondii in stranded marine mammals from the North Sea and Eastern Atlantic Ocean: Findings and diagnostic difficulties.

The occurrence of the zoonotic protozoan parasite Toxoplasma gondii in marine mammals remains a poorly understood phenomenon. In this study, samples from 589 marine mammal species and 34 European otters (Lutra lutra), stranded on the coasts of Scotland, Belgium, France, The Netherlands and Germany, were tested for the presence of T. gondii.

Late Stone Age human remains from Ishango (Democratic Republic of Congo): New insights on Late Pleistocene modern human diversity in Africa.

Although questions of modern human origins and dispersal are subject to intense research within and outside Africa, the processes of modern human diversification during the Late Pleistocene are most often discussed within the context of recent human genetic data. This situation is due largely to the dearth of human fossil remains dating to the final Pleistocene in Africa and their almost total absence from West and Central Africa, thus limiting our perception of modern human diversification within Africa before the Holocene. Here, we present a morphometric comparative analysis of the earliest Late Pleistocene modern human remains from the Central African site of Ishango in the Democratic Republic of Congo.

Impact of Age, Season, and Flowing vs. Stagnant Water Habitat on Avian Influenza Prevalence in Mute Swan (Cygnus olor) in Belgium.

Due to their probable role in the spread of Asian highly pathogenic avian influenza (HPAI) H5N1 virus, and in order to explore its implication in the low pathogenic avian influenza (LPAI) virus epidemiology, mute swans represent one particular wild bird species specifically targeted in the avian influenza (AI) surveillance elaborated in Belgium. A total of 640 individual mute swans have been sampled during a 4-yr AI surveillance program (2007-2010) to determine the AI seroprevalence and viroprevalence in this species; all were analyzed through age, temporal, and habitat (flowing and stagnant water) factors. Using a nucleoprotein (NP)-based ELISA, a global antibody prevalence of 35% has been found and was characterized by two peaks in the winter and the summer that might be indicative of a greater LPAI virus circulation in the autumn than in the spring.

Complete Coding Sequences of One H9 and Three H7 Low-Pathogenic Influenza Viruses Circulating in Wild Birds in Belgium, 2009 to 2012.

The complete coding sequences of four avian influenza A viruses (two H7N7, one H7N1, and one H9N2) circulating in wild waterfowl in Belgium from 2009 to 2012 were determined using Illumina sequencing. All viral genome segments represent viruses circulating in the Eurasian wild bird population.

Mitogenomics reveals high synteny and long evolutionary histories of sympatric cryptic nematode species.

Species with seemingly identical morphology but with distinct genetic differences are abundant in the marine environment and frequently co-occur in the same habitat. Such cryptic species are typically delineated using a limited number of mitochondrial and/or nuclear marker genes, which do not yield information on gene order and gene content of the genomes under consideration. We used next-generation sequencing to study the composition of the mitochondrial genomes of four sympatrically distributed cryptic species of the Litoditis marina species complex (PmI, PmII, PmIII, and PmIV).

A long-lasting taxonomic problem in European Sympycnus resolved, with the description of a new species and data on habitat preferences.

Type specimens of Sympycnus pulicarius, S. annulipes, S. cinerellus and S.

Fatal Asphyxiation in Two Long-Finned Pilot Whales (Globicephala melas) Caused by Common Soles (Solea solea).

Long-finned pilot whales (Globicephala melas) are rare visitors to the southern North Sea, but recently two individual strandings occurred on the Dutch coast. Both animals shared the same, unusual cause of death: asphyxiation from a common sole (Solea solea) stuck in their nasal cavity. This is a rare cause of death in cetaceans.

Acoustic stress responses in juvenile sea bass Dicentrarchus labrax induced by offshore pile driving.

Underwater sound generated by pile driving during construction of offshore wind farms is a major concern in many countries. This paper reports on the acoustic stress responses in young European sea bass Dicentrarchus labrax (68 and 115 days old), based on four in situ experiments as close as 45 m from a pile driving activity. As a primary stress response, whole-body cortisol seemed to be too sensitive to 'handling' bias.

Bite injuries of grey seals (Halichoerus grypus) on harbour porpoises (Phocoena phocoena).

Bite-like skin lesions on harbour porpoises (Phocoena phocoena) have been suspected to be caused by grey seals (Halichoerus grypus), and a few field observations have been reported. Bite-like skin lesions observed on stranded animals were characterized by two main components: large flaps of loose or missing skin and blubber with frayed edges and puncture lesions. Definitive demonstration of predation by a grey seal was not reported so far in those stranded animals.

In situ mortality experiments with juvenile sea bass (Dicentrarchus labrax) in relation to impulsive sound levels caused by pile driving of windmill foundations.

Impact assessments of offshore wind farm installations and operations on the marine fauna are performed in many countries. Yet, only limited quantitative data on the physiological impact of impulsive sounds on (juvenile) fishes during pile driving of offshore wind farm foundations are available. Our current knowledge on fish injury and mortality due to pile driving is mainly based on laboratory experiments, in which high-intensity pile driving sounds are generated inside acoustic chambers.