16,736 results match your criteria: "Rockefeller University.[Affiliation]"

Case Report of Two Independent Moroccan Families with Syndromic Epidermodysplasia Verruciformis and STK4 Deficiency.

Viruses

September 2024

Laboratory of Clinical Immunology-Inflammation and Allergy (LICIA), Faculty of Medicine and Pharmacy, Hassan II University, Casablanca 20250, Morocco.

Article Synopsis
  • Epidermodysplasia verruciformis (EV) is a rare skin condition linked to β-human papillomaviruses (HPV) in immunodeficient individuals, presenting as flat warts and pityriasis-like lesions.
  • The study details three patients from two families with syndromic EV, identified through whole exome sequencing to have new homozygous variants in the STK4 gene, resulting in a premature stop codon.
  • STK4 deficiency causes a combined immunodeficiency leading to increased susceptibility to various infections and autoimmune issues, as evidenced by immunophenotyping showing significant CD4 T cell deficiency in the patients.
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Acute myocardial infarction still represents the major cause of mortality in high-income countries. Therefore, considerable efforts have been focused on the treatment of myocardial infarctions in the acute and long-term phase, with special attention being paid to reperfusion strategies and adjunctive antithrombotic therapies. In fact, despite the successful mechanical recanalization of the epicardial conduit, a substantial percentage of patients still experience poor myocardial reperfusion or acute/subacute in-stent thrombosis.

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Oxidative Stress in Cardiorenal System.

Antioxidants (Basel)

September 2024

Laboratory of Blood and Vascular Biology, The Rockefeller University, New York, NY 10065, USA.

Reactive oxygen species (ROS) is a general term that describes free radicals [e [...

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Common and divergent pathways in early stages of glutamate and tau-mediated toxicities in neurodegeneration.

Exp Neurol

December 2024

Department of Neurology, Icahn School of Medicine at Mount Sinai, New York, NY 10029, United States of America; Fishberg Department of Neuroscience, Icahn School of Medicine at Mount Sinai, New York, NY 10029, United States of America; Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY 10029, United States of America. Electronic address:

Article Synopsis
  • Excitotoxicity and tau-mediated toxicities are key factors in neuronal death related to Alzheimer's disease (AD), with issues like glutamate levels being critical.
  • *The main glutamate transporter, EAAT2 (GLT-1), is deficient in AD brains, leading to cell death from excitotoxicity, while tau protein buildup correlates with cognitive decline.
  • *Research using mouse models revealed that GLT-1 deficiency affects pathways linked to neuronal survival, while tau mutations disrupt endocytic pathways and mitochondria, highlighting potential therapeutic targets.*
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Genomic analysis of from non-clinical settings: antimicrobial resistance, virulence, and clonal population in livestock and the urban environment.

Front Microbiol

September 2024

Laboratory of Molecular Genetics, Instituto de Tecnologia Química e Biológica António Xavier, Universidade Nova de Lisboa (ITQB NOVA), Oeiras, Portugal.

Article Synopsis
  • Enterococci, which are typically harmless bacteria in the gut, have become opportunistic pathogens known for their antibiotic resistance and are significant causes of hospital infections globally.
  • In a study, researchers screened 295 samples from livestock and various environments for Enterococci, discovering that 90.5% were positive, with notably high rates in livestock compared to environmental samples, though none showed vancomycin resistance.
  • The analysis revealed a variety of antibiotic resistance among isolates and identified several virulence factors, with some non-clinical strains displaying characteristics that are often found in clinical isolates, despite no direct link being established between them and hospital infections.
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Upon antigenic stimulation, naïve CD4+ T cells can give rise to phenotypically distinct effector T helper cells and long-lived memory T cells. We computationally reconstructed the in vivo trajectory of CD4+ T cell differentiation during a type I inflammatory immune response and identified two distinct differentiation paths for effector and precursor central memory T cells arising directly from naïve CD4+ T cells. Unexpectedly, our studies revealed heterogeneity among naïve CD4+ T cells, which are typically considered homogeneous save for their diverse T cell receptor usage.

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Grammotoxin increases its toxic behavior.

J Gen Physiol

October 2024

Science Writer, Rockefeller University Press, New York, NY, USA.

Article Synopsis
  • The study by Collaço et al. explores the inhibitory effects of ω-grammotoxin-SIA on various voltage-gated ion channels.
  • In addition to its known impact on calcium (Ca2+) and potassium (K+) channels, the toxin also inhibits voltaged-gated sodium (Na+) channel currents.
  • These findings suggest that ω-grammotoxin-SIA has a broader effect on ion channel activity than previously understood, which could have implications for understanding its biological roles.
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Single-cell sequencing has characterized cell state heterogeneity across diverse healthy and malignant tissues. However, the plasticity or heritability of these cell states remains largely unknown. To address this, we introduce PATH (phylogenetic analysis of trait heritability), a framework to quantify cell state heritability versus plasticity and infer cell state transition and proliferation dynamics from single-cell lineage tracing data.

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Article Synopsis
  • Interferons (IFNs) are important for how our bodies respond to viruses, and this study used CRISPR to find human genes affecting SARS-CoV-2 infection with and without IFN.
  • The research identified 28 key genes linked to COVID-19, especially those involving the IFN pathway, including PLSCR1, which can limit virus entry without needing IFN.
  • PLSCR1’s ability to block SARS-CoV-2 was reduced by the overexpression of TMPRSS2, and some virus variants have evolved to bypass PLSCR1’s defense, suggesting ongoing challenges in controlling the virus.
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Autoantibodies neutralizing type I IFNs underlie severe tick-borne encephalitis in ∼10% of patients.

J Exp Med

October 2024

Laboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale (INSERM) U1163, Necker Hospital for Sick Children, Paris, France.

Article Synopsis
  • Tick-borne encephalitis virus (TBEV), spread through tick bites, mostly causes mild illness in over 90% of cases, but can lead to varying degrees of encephalitis in some individuals.
  • Around 10% of patients with severe TBE in Austria, Czech Republic, and France have auto-antibodies (auto-Abs) that neutralize certain types of interferon (IFN), which are important for immune response, while only about 1% of patients with milder symptoms have them.
  • The presence of these auto-Abs significantly increases the risk of severe TBE, with odds ratios indicating up to a 20.8 times higher chance of severe illness when these auto-Abs are
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A sensitive assay for measuring whole-blood responses to type I IFNs.

Proc Natl Acad Sci U S A

October 2024

Laboratory of Human Genetics of Infectious Diseases, Necker Branch, Institut National de la Santé et de la Recherche Médicale U1163, Necker Hospital for Sick Children, Paris 75015, France.

Article Synopsis
  • Inborn errors or autoantibodies (auto-Abs) against type I interferons (IFNs) can lead to severe viral infections.
  • Researchers developed a straightforward blood test that can identify these conditions by stimulating blood with glycosylated IFN-α2, -β, or -ω and measuring IP-10 levels.
  • The study found that IP-10 levels in patients with inherited deficiencies only increase with type II IFN (IFN-γ), while those with auto-Abs can still respond to non-neutralized type I IFNs.
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Nucleosomes constitute the primary unit of eukaryotic chromatin and have been the focus of numerous informative single-molecule investigations regarding their biophysical properties and interactions with chromatin-binding proteins. Nucleosome reconstitution on DNA for these studies typically involves a salt dialysis procedure that provides precise control over the placement and number of nucleosomes formed along a DNA tether. However, this protocol is time-consuming and requires a substantial amount of DNA and histone octamers as inputs.

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Despite therapeutic efficacy observed with immune checkpoint blockade in advanced melanoma, many tumors do not respond to treatment, representing a need for new therapies. Here, we have generated chimeric antigen receptor (CAR) T cells targeting TYRP1, a melanoma differentiation antigen expressed on the surface of melanomas, including rare acral and uveal melanomas. TYRP1-targeted CAR T cells demonstrate antigen-specific activation and cytotoxic activity and against human melanomas independent of the MHC alleles and expression.

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The 2024 Lasker~DeBakey Clinical Medical Research Award has been given to Joel Habener and Svetlana Mojsov for their discovery of a new hormone GLP-1(7-37) and to Lotte Knudsen for her role in developing sustained acting versions of this hormone as a treatment for obesity. Each of the three had a distinct set of skills that made this advance possible; Habener is an endocrinologist and molecular biologist, Mojsov is a peptide chemist, and Knudsen is a pharmaceutical scientist. Their collective efforts have done what few thought possible-the development of highly effective medicines for reducing weight.

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Germline mutations in a G protein identify signaling cross-talk in T cells.

Science

September 2024

Human Immunological Diseases Section, Laboratory of Clinical Immunology and Microbiology, Division of Intramural Research (DIR), National Institute of Allergy and Infectious Diseases (NIAID), National Institutes of Health (NIH), Bethesda, MD, USA.

Article Synopsis
  • Researchers studied mutations in a gene that affects a key protein involved in cell signaling, which is linked to severe health issues like impaired immunity in patients.
  • The mutations were found to disrupt normal cell behavior by promoting excessive cell growth and responses to immune signals, specifically T cell receptor stimulation.
  • The mutant protein was shown to interfere with a regulatory protein, leading to heightened activity of important signaling pathways that contribute to cell growth and survival.
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Mechanical force controls the opening and closing of mechanosensitive ion channels atop the hair bundles of the inner ear. The filamentous tip link connecting transduction channels to the tallest neighboring stereocilium modulates the force transmitted to the channels and thus changes their probability of opening. Each tip link comprises four molecules: a dimer of protocadherin 15 (PCDH15) and a dimer of cadherin 23, all of which are stabilized by Ca binding.

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GPCR Biosensors to Study Conformational Dynamics and Signaling in Drug Discovery.

Annu Rev Pharmacol Toxicol

January 2025

Laboratory of Chemical Biology and Signal Transduction, The Rockefeller University, New York, NY, USA; email:

G protein-coupled receptors (GPCRs) are a superfamily of transmembrane signal transducers that facilitate the flow of chemical signals across membranes. GPCRs are a desirable class of drug targets, and the activation and deactivation dynamics of these receptors are widely studied. Multidisciplinary approaches for studying GPCRs, such as downstream biochemical signaling assays, cryo-electron microscopy structural determinations, and molecular dynamics simulations, have provided insights concerning conformational dynamics and signaling mechanisms.

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Article Synopsis
  • A genomic database encompassing all eukaryotic species on Earth is crucial for scientific advancements, yet most species lack genomic data.
  • The Earth BioGenome Project (EBP) was initiated in 2018 by global scientists to compile high-quality reference genomes for approximately 1.5 million recognized eukaryotic species.
  • The European Reference Genome Atlas (ERGA) launched a Pilot Project to create a decentralized model for reference genome production by testing it on 98 species, providing valuable insights into scalability, equity, and inclusiveness for genomic projects.
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Building a Portuguese coalition for biodiversity genomics.

NPJ Biodivers

September 2024

CE3C-Centre for Ecology, Evolution and Environmental Changes & CHANGE-Global Change and Sustainability Institute, Faculdade de Ciências, Universidade de Lisboa, Campo Grande, 1749-016, Lisbon, Portugal.

Article Synopsis
  • Portugal has a lot of different plants and animals because of its unique geography and history, but these species are in danger from things like climate change and over-exploitation.
  • Researchers in Portugal are working together through a project called Biogenome Portugal to study and document biodiversity, which means looking closely at the genes of different species.
  • The goal is to create a library of genetic information to help protect endangered species and promote conservation efforts in Portugal, especially for unique plants and animals found only there.
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Article Synopsis
  • Melanoma caused by sun exposure differs from rarer types of melanocytic tumors, which have fewer mutations and allow researchers to explore specific signaling mechanisms.
  • Uveal melanoma and blue nevi are examples of these rarer tumors, often linked to mutations in a particular signaling pathway involving G protein-coupled receptors.
  • The study highlights how the same mutations can lead to cell growth in one tissue while hindering growth in another, illustrating how the tissue environment influences cell behavior and balance between growth and aging.
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Background: Psoriasis, a chronic, immune-mediated, inflammatory disease, affects 2‒3% of the population. Tyrosine kinase 2 (TYK2) mediates cytokine signaling involved in adaptive [interleukin (IL)-12, IL-23] and innate (type-I interferons) immune responses; IL-23-driven T-helper (Th)17 pathways play a key role in chronic inflammation in psoriasis. In a phase 2 trial, deucravacitinib, an oral, selective, allosteric TYK2 inhibitor, reduced IL-23/Th17 and type-I interferon pathway expression in the skin of patients with moderate to severe plaque psoriasis, reductions that were accompanied by clinical improvement of psoriatic lesions.

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Mitochondrial Hyperactivity and Reactive Oxygen Species Drive Innate Immunity to the Yellow Fever Virus-17D Live-Attenuated Vaccine.

bioRxiv

September 2024

Innate Immunity and Pathogenesis Section, Laboratory of Neurological Infections and Immunity, Rocky Mountain Laboratories, NIAID, NIH, Hamilton, MT.

Article Synopsis
  • The yellow fever virus 17D (YFV-17D) vaccine is highly effective at generating antiviral immunity, but the mechanisms behind its immune response remain unclear.
  • Researchers discovered that YFV-17D infection triggers mitochondrial activity and metabolic changes that enhance the production of type I interferon (IFN), a key part of the immune response.
  • The study found that reactive oxygen species (mROS) and peroxynitrite produced by mitochondrial hyperactivity play a crucial role in activating innate immunity, making the vaccine more effective against infection.
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