240 results match your criteria: "Research Center for Biology[Affiliation]"

Criegee intermediates (CIs) are potentially significant oxidants and a major source of OH radicals in the troposphere. The -CHCHOO intermediate has been confirmed as a crucial component of CIs in the atmospheric environment. Although previous studies have provided some experimental and theoretical rate constants, inconsistencies among these data remain, and the experimental data do not cover the full range of temperatures present in the troposphere.

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NIT2 dampens BRD1 phase separation and restrains oxidative phosphorylation to enhance chemosensitivity in gastric cancer.

Sci Transl Med

November 2024

Department of Gastrointestinal Surgery, First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong 510080, China.

Article Synopsis
  • 5-Fluorouracil (5-FU) resistance in gastric cancer is linked to low levels of the nitrilase family member 2 (NIT2), which plays a crucial role in overcoming this resistance through mechanisms unrelated to its metabolic functions.
  • The study revealed that NIT2 interacts with BRD1, inhibiting harmful gene expression related to cellular energy production, leading to enhanced sensitivity to 5-FU treatment.
  • Additionally, NIT2's presence is associated with better patient prognosis, and targeting oxidative phosphorylation with metformin can further improve the effectiveness of 5-FU in patients with low NIT2 levels.
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Transfersomal serum loading amniotic mesenchymal stem cells metabolite products with hyaluronic acid addition for skin regeneration in UV aging-induced mice.

Int J Pharm

December 2024

Department of Pharmaceutical Sciences, Faculty of Pharmacy, Universitas Airlangga, Campus C UNAIR Mulyorejo, Surabaya 60115, Indonesia; Skin and Cosmetic Technology Center of Excellence, Faculty of Pharmacy, Universitas Airlangga, Campus C UNAIR Mulyorejo, Surabaya 60115, Indonesia.

Amniotic Mesenchymal Stem Cells Metabolite Products (AMSC-MP) contain growth factors that benefit human health. This study aims to evaluate the use of transfersomal serum (Trans) with hyaluronic acid (HA) addition to deliver large molecules of AMSC-MP for skin regeneration. Trans is composed of L-α-phosphatidylcholine and surfactants, i.

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A Multipole-Based Reactive Force Field for Hydrocarbons.

J Chem Theory Comput

November 2024

Laboratory of Molecular Modeling and Design, State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian 116023, China.

The computational complexity of quantum chemistry methods has prompted the development of reactive force fields, facilitating practical applications of molecular dynamics simulations for large-scale reactive systems. Current reactive force fields typically employ intricate corrections based on prior chemical knowledge, which severely impedes their further advancement. This study presents a new atomic multipole-based reactive model with bond free (OPERATOR).

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OH Regulator of Amorphous CrO on Defect-Rich Ultrafine Pd Nanowires Boosts Electrocatalytic Ethanol Oxidation.

Small

December 2024

Electrocatalysis & Nanomaterial Laboratory, College of Materials Science and Engineering, Qingdao University of Science and Technology, Qingdao, 266042, P. R. China.

Reasonable construction of high activity and selectivity electrocatalysts is crucial to achieve efficient ethanol oxidation reaction (EOR). However, the oxidation of ethanol tends to produce CO species that poison the active centers of the EOR electrocatalysts. Herein, a unique amorphous CrO-protected defect-rich ultrafine Pd nanowires (CrO-Pd NWs) is developed.

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Article Synopsis
  • The study investigates how varying levels of sperm competition affect the evolution of reproductive traits and genes in mice and rats (Murinae), focusing on 78 species.
  • Researchers discovered that species with smaller testes mass tend to experience relaxations in evolutionary pressures, leading to faster molecular evolution of genes related to sperm production.
  • The findings highlight the impact of postcopulatory sexual selection on male reproductive evolution and suggest that certain genetic changes could be linked to male fertility.
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Biogeographical reconstructions of the Indo-Australian Archipelago (IAA) have suggested a recent spread across the Sunda and Sahul shelves of lineages with diverse origins, which appears to be congruent with a geological history of recent tectonic uplift in the region. However, this scenario is challenged by new geological evidence suggesting that the Sunda shelf was never submerged prior to the Pliocene, casting doubt on the interpretation of recent uplift and the correspondence of evidence from biogeography and geology. A mismatch between geological and biogeographical data may occur if analyses ignore the dynamics of extinct lineages, because this may add uncertainty to the timing and origin of clades in biogeographical reconstructions.

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Insight of the molecular mechanism of inhibitors located at different allosteric sites regulating the activity of wild type and mutant KRAS (G12).

Arch Biochem Biophys

October 2024

Interdisciplinary Research Center for Biology and Chemistry, Liaoning Normal University, Dalian, 116029, China; Laboratory of Molecular Modeling and Design, State Key Laboratory of Molecular Reaction Dynamics, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, Dalian, 116023, China. Electronic address:

As the important hub of many cellular signaling networks, KRAS (Kirsten rat sarcoma viral oncogene homologue) has been identified as a tumor biomarker. It is the frequently mutated oncogene in human cancers, and KRAS protein activation caused by mutations, such as G12D, has been found in many human tumors tissues. Although, there are two specific allosteric sites (AS1 and AS2) on the KRAS protein that can be used as the targets for inhibitor development, the difference of regulatory mechanisms between two individual allosteric sites still not be reported.

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Divergence dating analyses in systematics provide a framework to develop and test biogeographic hypotheses regarding speciation. However, as molecular datasets grow from multilocus to genomic, sample sizes decrease due to computational burdens, and the testing of fine-scale biogeographic hypotheses becomes difficult. In this study, we use coalescent demographic models to investigate the diversification of poorly known rice paddy snakes from Southeast Asia (Homalopsidae: Hypsiscopus), which have conflicting dates of origin based on previous studies.

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The zeylanica group is one of the six species groups of the anthophilic genus Colocasiomyia de Meijere in the family Drosophilidae. In addition to two known species, five morphospecies have been recognized as members of this species group but left undescribed formally. In this study, species delimitation of these putatively new species was determined by barcoding of the mitochondrial COI (cytochrome c oxydase subunit I) gene and morphological comparison.

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Article Synopsis
  • Repeated colonization and hybridization on Muna Island contribute to increased biodiversity among the Oryzias woworae fish species group, indicating a complex evolutionary history.
  • Phylogenetic analyses show that while all populations on Muna Island are related, multiple distinct lineages exist, and there were multiple colonization events with introgressive hybridization occurring primarily in one local population.
  • The study suggests these colonizations happened during the Quaternary period, facilitated by land bridges due to decreased sea levels, leading to rich and varied genetic diversity in the fish species of this region.
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Article Synopsis
  • Understanding the origins of biodiversity and what drives certain clades to diversify more than others is crucial in evolutionary biology.
  • Sophisticated models like state-dependent speciation and extinction (SSE) help assess the relationship between diversity rates and trait evolution, but they are sensitive to the quality of empirical data used.
  • This study highlights how issues like sampling fraction and biases heavily influence SSE model outcomes, showing that lower completeness can lead to inaccurate estimates and increased false positives, suggesting a cautious approach to estimating sampling efforts is preferable.
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Article Synopsis
  • Transfersome is designed to improve the delivery of amniotic mesenchymal stem cell metabolite products (AMSC-MP), which contain growth factors beneficial for skin aging management.
  • The study compares different surfactants—cationic (stearylamine), anionic (sodium cholate), and nonionic (Tween 80)—to find the best one for loading AMSC-MP into transfersomes, with sodium cholate yielding the smallest particle size for optimal skin penetration.
  • Results indicate that anionic transfersomes (Trans-SC and Trans-TW) enhance collagen density more effectively than cationic ones, and all formulations are relatively safe for dermal use.
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Melanesia holds the world's most diverse and intact insular amphibian fauna.

Commun Biol

November 2022

IUCN SSC Amphibian Specialist Group, 3701 Lake Shore Blvd W, P.O. Box 48586, Toronto, Ontario, M8W 1P5, Canada.

Identifying hotspots of biological diversity is a key step in conservation prioritisation. Melanesia-centred on the vast island of New Guinea-is increasingly recognised for its exceptionally species-rich and endemic biota. Here we show that Melanesia has the world's most diverse insular amphibian fauna, with over 7% of recognised global frog species in less than 0.

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Freshwater halfbeaks of the genus (Zenarchopteridae) uniquely diversified on Sulawesi Island, where tectonic movements have been very active since the Pliocene. Most species of this genus have quite limited distributions, which indicates that geographic isolations have contributed to their diversification. In this study, we demonstrated that secondary contacts and resultant admixtures between long-isolated species/populations may have also been important.

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Phylogenetic relationships of southern Wallacean ranid frogs (Anura: Ranidae: Hylarana).

Zootaxa

June 2022

Museum of Vertebrate Zoology and Department of Integrative Biology, University of California, Berkeley, California 94720, USA.

Frogs in the family Ranidae are diverse in Asia and are thought to have dispersed to the Sahul Shelf approximately 10 million years ago, where they radiated into more than a dozen species. Ranid species in the intervening oceanic islands of Wallacea, such as Hylarana florensis and H. elberti from the Lesser Sundas and H.

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The relative contribution of speciation and extinction into current diversity is certainly unknown, but mathematical frameworks that use genetic information have been developed to provide estimates of these processes. To that end, it is necessary to reconstruct molecular phylogenetic trees which summarize ancestor-descendant relationships as well as the timing of evolutionary events (i.e.

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Soursop leaves ( L.) endophytic fungi anticancer activity against HeLa cells.

Saudi J Biol Sci

August 2022

Department of Biochemistry, Faculty of Mathematics and Natural Sciences, Bogor Agricultural University, Jl. Lingkar Akademik, Kampus IPB Darmaga, Bogor 16888, Indonesia.

Cervical cancer causes many deaths in females worldwide, including in Indonesia. Several studies have reported that soursop ( L.) leaves can be used to treat cervical cancer.

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The Innovation Arena: A Method for Comparing Innovative Problem-Solving Across Groups.

J Vis Exp

May 2022

Comparative Cognition, Messerli Research Institute, University of Veterinary Medicine Vienna, University of Vienna, Medical University of Vienna.

Problem-solving tasks are commonly used to investigate technical, innovative behavior but a comparison of this ability across a broad range of species is a challenging undertaking. Specific predispositions, such as the morphological toolkit of a species or exploration techniques, can substantially influence performance in such tasks, which makes direct comparisons difficult. The method presented here was developed to be more robust with regard to such species-specific differences: the Innovation Arena presents 20 different problem-solving tasks.

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Sulawesi is a biodiversity hotspot for ricefishes (Adrianichthyidae), with many species endemic to the central part of this island in single ancient lakes or lake systems. Frequent vicariance by lake fragmentation since the Pliocene may be largely responsible for diversification in this family. In this study, we demonstrate that not only lacustrine species but also riverine species in this area are also deeply divergent even within a single river system.

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The first Nocticola Bolivar 1892 (Blattodea: Nocticolidae) from New Guinea.

Zootaxa

December 2021

Department of Zoology and Fisheries, Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences Prague, Prague, Czech Republic.

A new species of highly troglobitic cockroach, Nocticola baumi n. sp., is described from limestone caves of Papua Province, Indonesia.

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The phylogeny of the Colocasiomyia cristata species group is reconstructed as a hypothesis, based on DNA sequences of two mitochondrial and six nuclear genes and 51 morphological characters. The resulting tree splits this species group into two clades, one of which corresponds to the colocasiae subgroup. Therefore, a new species subgroup named as the cristata subgroup is established for the other clade.

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Background: Indonesia is one of the Southeast Asian countries with high case numbers of COVID-19 with up to 4.2 million confirmed cases by 29 October 2021. Understanding the genome of SARS-CoV-2 is crucial for delivering public health intervention as certain variants may have different attributes that can potentially affect their transmissibility, as well as the performance of diagnostics, vaccines, and therapeutics.

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The Indo-Malayan Realm is a biogeographic realm that extends from the Indian Subcontinent to the islands of Southeast Asia (Malay Archipelago). Despite being megadiverse, evolutionary hypotheses explaining taxonomic diversity in this region have been rare. Here, we investigate the role of geoclimatic events such as Himalayan orogeny and monsoon intensification in the diversification of the ginger-lilies (Hedychium J.

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