10,496 results match your criteria: "PA 19107 USA ; The Commonwealth Medical College[Affiliation]"

ARID1A-BAF coordinates ZIC2 genomic occupancy for epithelial-to-mesenchymal transition in cranial neural crest specification.

Am J Hum Genet

October 2024

Department of Biochemistry and Molecular Biology, Thomas Jefferson University, Philadelphia, PA, USA; Department of Life Sciences, Imperial College London, London, UK. Electronic address:

Article Synopsis
  • The study highlights the role of the BAF chromatin remodeler, specifically the ARID1A subunit, in cranial neural crest cell (CNCC) specification and its link to Coffin-Siris syndrome (CSS).
  • ARID1A haploinsufficiency disrupts the epithelial-to-mesenchymal transition (EMT) vital for CNCC migration, while ARID1A-BAF regulates enhancers connected to EMT genes, demonstrating that ZIC2 binding at these enhancers relies on ARID1A.
  • The research establishes an important connection between ARID1A and ZIC2 in promoting EMT and successful CNCC delamination, suggesting implications for understanding congenital disorders like CSS.
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Immunoactive signatures of circulating tRNA- and rRNA-derived RNAs in chronic obstructive pulmonary disease.

Mol Ther Nucleic Acids

September 2024

Computational Medicine Center, Sidney Kimmel Medical College, Thomas Jefferson University, Philadelphia, PA 19107, USA.

Chronic obstructive pulmonary disease (COPD) is the most prevalent lung disease, and macrophages play a central role in the inflammatory response in COPD. We here report a comprehensive characterization of circulating short non-coding RNAs (sncRNAs) in plasma from patients with COPD. While circulating sncRNAs are increasingly recognized for their regulatory roles and biomarker potential in various diseases, the conventional RNA sequencing (RNA-seq) method cannot fully capture these circulating sncRNAs due to their heterogeneous terminal structures.

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Headaches due to Nasal and Paranasal Sinus Disease.

Neurol Clin

May 2024

Department of Neurology, Thomas Jefferson University Hospital, Jefferson Headache Center, 900 Walnut Street #200, Philadelphia, PA 19107, USA. Electronic address:

Headache and rhinosinusitis are 2 of the most common conditions seen in clinical practice. Consider sinusitis in those with new-onset headache, along with nasal congestion, maxillary tooth discomfort, anosmia, cough, or fever. Most chronic and recurring headaches, especially if migraine features are present, are not due to sinus disease, with the possible exception of rhinogenic headache due to nasal contact points.

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Vertical rhythmic dyskinetic movements that are primarily drug-induced and affect solely the jaw, mouth, and lips without involving the tongue have been historically described as "rabbit" syndrome (RS). Evidence on the unique features and implications of this disorder remains limited. This literature review aims to evaluate the clinical-epidemiological profile, pathological mechanisms, and management of this movement disorder.

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The traditional open midline posterior cervical spine fusion procedure has several shortcomings. It can cause soft tissue damage, muscle atrophy, compromise of the lateral masses and painful prominent posterior cervical instrumentation or spinous process if there is dehiscence of the fascia. Additionally, patients frequently experience the rapid development of adjacent segment disease, which can result in the reemergence of debilitating pain and functional impairment.

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Local Antibiotic Infusion in Periprosthetic Joint Infection Following Total Hip Arthroplasty.

J Clin Med

August 2024

Department of Surgical Sciences, Orthopedics and Traumatology, School of Medicine, Acibadem University, Istanbul 34752, Türkiye.

Local antibiotic infusion has emerged as a promising adjunctive therapy, delivering high concentrations of antibiotics directly to the infection site. This approach aims to enhance eradication of pathogens while minimizing systemic side effects associated with prolonged antibiotic use. This narrative review encompassed 10 articles focused on all three procedures of surgical intervention for periprosthetic joint injection (PJI) following total hip arthroplasty (THA): debridement, antibiotics, and implant retention (DAIR), single-stage revision arthroplasty, and two-stage revision arthroplasty.

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Sedation for GI Endoscopy in the Morbidly Obese: Challenges and Possible Solutions.

J Clin Med

August 2024

Department of Anesthesiology, Sidney Kimmel Medical College, 111 S 11th Street, #8280, Philadelphia, PA 19107, USA.

With the increasing prevalence of obesity and morbid obesity, this subgroup's contribution to patients presenting for elective procedures requiring sedation is significant. Gastrointestinal (GI) procedures clearly form the largest group of such procedures. These procedures may be intended to treat obesity such as the insertion of an intragastric balloon or one or more unrelated procedures such as a screening colonoscopy and (or) diagnostic/therapeutic endoscopy.

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Overexpression and aberrant activation of signal transducer and activator of transcription 3 (STAT3) contribute to tumorigenesis, drug resistance, and tumor-immune evasion, making it a potential cancer therapeutic target. BP1003 is a neutral liposome incorporated with a nuclease-resistant P-ethoxy antisense oligodeoxynucleotide (ASO) targeting the STAT3 mRNA. Its unique design enhances BP1003 stability, cellular uptake, and target affinity.

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Our objective was to provide expert consensus on best practices for anatomy teaching and training on ultrasound-guided botulinum neurotoxin type A (BoNT-A) injection for specialists involved in treating spasticity and dystonia. Nine experts (three neurologists; six physical medicine and rehabilitation physicians) participated in a three-round modified Delphi process. Over three rounds, experts reached consensus on 15 of 16 statements describing best practices for anatomy and BoNT-A injection training.

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Imaging for prostate cancer defines the extent of disease. Guidelines recommend against imaging low-risk prostate cancer patients with a computed tomography (CT) scan or bone scan due to the low probability of metastasis. We reviewed imaging performed for men diagnosed with low-risk prostate cancer across the Pennsylvania Urologic Regional Collaborative (PURC), a physician-led data sharing and quality improvement collaborative.

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: Inferior Vena Cava (IVC) filters have become an advantageous treatment modality for patients with venous thromboembolism. As the use of these filters continues to grow, it is imperative for providers to appropriately educate patients in a comprehensive yet understandable manner. Likewise, generative artificial intelligence models are a growing tool in patient education, but there is little understanding of the readability of these tools on IVC filters.

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Article Synopsis
  • The AKT kinases are vital signaling molecules that affect key cellular functions related to cancer, such as growth, survival, and spread of tumors.
  • Dysregulation of the AKT pathway can occur when tumor suppressors are lost or oncogenes are activated, which is a common feature in many human cancers.
  • The text reviews extensive research on how the AKT pathway is hyperactivated in both sporadic tumors and genetic cancer syndromes, and highlights its involvement in certain overgrowth disorders.
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The role of CD4 T cells in the induction of protective CD8 T cells by mRNA lipid nanoparticle (LNP) vaccines is unknown. We used B6 or mice depleted or not of CD4 T cells and LNP vaccines loaded with mRNAs encoding the ectromelia virus (ECTV) MHC class I H-2 K-restricted immunodominant CD8 T cell epitope TSYKFESV (TSYKFESV mRNA-LNPs) or the ECTV EVM158 protein, which contains TSYKFESV (EVM-158 mRNA-LNPs). Following prime and boost with 10 μg of either vaccine, K-TSYKFESV-specific CD8 T cells fully protected male and female mice from ECTV at 29 (both mRNA-LNPs) or 90 days (EVM158 mRNA-LNPs) post boost (dpb) independently of CD4 T cells.

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Proteoglycans of basement membranes: Crucial controllers of angiogenesis, neurogenesis, and autophagy.

Proteoglycan Res

June 2024

Department of Pathology and Genomic Medicine, and the Translational Cellular Oncology Program, Sidney Kimmel Cancer Center, Sidney Kimmel Medical College at Thomas Jefferson University, Philadelphia, PA 19107, USA.

Anti-angiogenic therapy is an established method for the treatment of several cancers and vascular-related diseases. Most of the agents employed target the vascular endothelial growth factor A, the major cytokine stimulating angiogenesis. However, the efficacy of these treatments is limited by the onset of drug resistance.

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Single Acetylation-mimetic Mutation in TDP-43 Nuclear Localization Signal Disrupts Importin α1/β Signaling.

J Mol Biol

October 2024

Dept. of Biochemistry and Molecular Genetics, The University of Alabama at Birmingham, 1825 University Blvd, Birmingham, AL 35294, USA. Electronic address:

Cytoplasmic aggregation of the TAR-DNA binding protein of 43 kDa (TDP-43) is the hallmark of sporadic amyotrophic lateral sclerosis (ALS). Most ALS patients with TDP-43 aggregates in neurons and glia do not have mutations in the TDP-43 gene but contain aberrantly post-translationally modified TDP-43. Here, we found that a single acetylation-mimetic mutation (K82Q) near the TDP-43 minor Nuclear Localization Signal (NLS) box, which mimics a post-translational modification identified in an ALS patient, can lead to TDP-43 mislocalization to the cytoplasm and irreversible aggregation.

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Neuromodulatory co-expression in cardiac vagal motor neurons of the dorsal motor nucleus of the vagus.

iScience

August 2024

Daniel Baugh Institute of Functional Genomics/Computational Biology, Department of Pathology and Genomic Medicine, Thomas Jefferson University, Philadelphia, PA 19107, USA.

Vagal innervation is well known to be crucial to the maintenance of cardiac health, and to protect and recover the heart from injury. Only recently has this role been shown to depend on the activity of the underappreciated dorsal motor nucleus of the vagus (DMV). By combining neural tracing, transcriptomics, and anatomical mapping in male and female Sprague-Dawley rats, we characterize cardiac-specific neuronal phenotypes in the DMV.

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Inflammatory myofibroblastic tumor (IMT) is a rare soft tissue tumor primarily occurring in the abdominopelvic region of young patients, and it is characterized by spindle-shaped myofibroblasts, or fibroblasts surrounded by inflammatory infiltrate. Herein, we report a case of a 24-year-old male with a firm submucosal mass in the anterior right vocal fold diagnosed as an IMT that recurred 14 months later. The tumor demonstrated a novel THBS1::ALK fusion containing Exons 1-7 of the thrombospondin 1 () gene fused to Exon 19 of the anaplastic lymphoma kinase () gene via next-generation sequencing with the NextSeq sequencer.

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Structural basis for substrate binding and selection by human mitochondrial RNA polymerase.

Nat Commun

August 2024

Department of Biochemistry and Molecular Biology, Thomas Jefferson University, 1020 Locust St, Philadelphia, PA, 19107, USA.

The mechanism by which RNAP selects cognate substrates and discriminates between deoxy and ribonucleotides is of fundamental importance to the fidelity of transcription. Here, we present cryo-EM structures of human mitochondrial transcription elongation complexes that reveal substrate ATP bound in Entry and Insertion Sites. In the Entry Site, the substrate binds along the O helix of the fingers domain of mtRNAP but does not interact with the templating DNA base.

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Article Synopsis
  • Multimodal monitoring combines data from various sensors to improve patient care, particularly for traumatic brain injury cases, and the study aims to implement this in battlefield scenarios using a noninvasive approach and AI-based guidance.
  • A Value-Burden Analysis was created to assess the effectiveness and deployment challenges of different sensors, ultimately scoring 17 sensors to find the best fit for military use.
  • The resulting system is modular with a comprehensive Knowledge Base, allowing it to provide guidance consistent with existing clinical guidelines while demonstrating feasibility in a prototype test.
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Addressing dermatologic concerns and teledermatology in undomiciled and sheltered populations.

Arch Dermatol Res

August 2024

Department of Dermatology and Cutaneous Biology, Thomas Jefferson University, 233 S. 10th Street, Philadelphia, PA, 19107, USA.

Article Synopsis
  • * A review highlights the diverse dermatologic conditions faced by homeless individuals—from acne to skin cancer—and identifies barriers to care, including drug abuse and domestic violence, which further complicate their health needs.
  • * Teledermatology has shown promise in improving access and outcomes for these populations, but challenges like the digital divide remain, necessitating a multi-faceted approach that includes volunteer clinics and integrative care strategies.
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The PRECEDE-PROCEED model is a comprehensive planning and theoretical framework that incorporates epidemiological, environmental, behavioral, and social factors systematically to design, implement, and evaluate health promotion programs. As such, PRECEDE-PROCEED is a highly effective tool for addressing complex and significant public health concerns like postpartum depression (PPD). PPD negatively impacts mothers and their infants, with studies showing that approximately one in eight mothers experience PPD, leading to adverse effects on maternal functioning and infant development.

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Structural basis for a Polθ helicase small-molecule inhibitor revealed by cryo-EM.

Nat Commun

August 2024

Department of Biochemistry and Molecular Biology, Sidney Kimmel Cancer Center, Thomas Jefferson University, Philadelphia, PA, 19107, USA.

DNA polymerase theta (Polθ) is a DNA helicase-polymerase protein that facilitates DNA repair and is synthetic lethal with homology-directed repair (HDR) factors. Thus, Polθ is a promising precision oncology drug-target in HDR-deficient cancers. Here, we characterize the binding and mechanism of action of a Polθ helicase (Polθ-hel) small-molecule inhibitor (AB25583) using cryo-EM.

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The chromatin-remodeling enzyme helicase lymphoid-specific (HELLS) interacts with cell division cycle-associated 7 (CDCA7) on nucleosomes and is involved in the regulation of DNA methylation in higher organisms. Mutations in these genes cause immunodeficiency, centromeric instability, and facial anomalies (ICF) syndrome, which also results in DNA hypomethylation of satellite repeat regions. We investigated the functional domains of human CDCA7 in HELLS using several mutant CDCA7 proteins.

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Remimazolam and Its Place in the Current Landscape of Procedural Sedation and General Anesthesia.

J Clin Med

July 2024

Honickman Center, Department of Anesthesiology, Sidney Kimmel Medical College, Jefferson Health, Philadelphia, PA 19107, USA.

Remimazolam was derived from its parent compound by adding an ester linkage into its structure so that the drug becomes a substrate for ester metabolism. As a result, it undergoes organ-independent ester hydrolysis, although the clinical benefits in terms of shorter recovery are not uniformly observed in clinical practice. Remimazolam is mainly tested in procedural sedation.

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