46 results match your criteria: "Northwestern Center for Biological Research[Affiliation]"
Biology (Basel)
May 2023
The Bashan Institute of Science, 1730 Post Oak Ct, Auburn, AL 36830, USA.
Soil restoration is one of the biggest challenges of this century. Besides the negative impacts of climate change, the current increase in food demands has put severe pressure on soil resources, resulting in a significant area of degraded land worldwide. However, beneficial microorganisms, such as microalgae and plant growth-promoting bacteria, have an outstanding ability to restore soil health and fertility.
View Article and Find Full Text PDFPlants (Basel)
October 2022
Instituto Tecnológico de Sonora, 5 de Febrero 818 sur, Ciudad Obregon 85000, Sonora, Mexico.
Bio-formulation technologies have a limited impact on agricultural productivity in developing countries, especially those based on plant growth-promoting rhizobacteria. Thus, calcium alginate microbeads were synthesized and used for the protection and delivery of three beneficial strains for agricultural applications. The process of encapsulation had a high yield per gram for all bacteria and the microbeads protected the strains, allowing their survival, after 12 months of storage at room temperature.
View Article and Find Full Text PDFJ Fungi (Basel)
November 2022
Centro de Investigación en Biotecnología, Universidad Autónoma del Estado de Morelos, Av. Universidad No. 1001, Col. Chamilpa, Cuernavaca 62209, Mexico.
The genus has significant economic importance since it is cultivated and consumed worldwide for its flavor and pungent properties. In 2021, Mexico produced 3.3 billion tons on 45,000 hectares which yielded USD 2 billion in exports to the USA, Canada, Japan, etc.
View Article and Find Full Text PDFACS Appl Mater Interfaces
October 2022
Department of Biosystems Engineering, Auburn University, Auburn, Alabama36849, United States.
Immobilization is a common strategy used to protect microbial cells to improve the performance of bioprocesses. However, the interaction mechanism between the cells and the immobilization material is generally poorly understood. In this study, we employed natural polysaccharide-based materials as immobilization carriers for clostridial fermentation in an attempt to enhance the production of butanol (a valuable biofuel/biochemical but highly toxic to the host cells) and meanwhile elucidate the interaction mechanisms related to immobilization.
View Article and Find Full Text PDFMicrob Ecol
May 2023
The Bashan Institute of Science, 1730 Post Oak Court, Auburn, AL, 36830, USA.
The microalga Chlorella sorokiniana and the microalgae growth-promoting bacteria (MGPB) Azospirillum brasilense have a mutualistic interaction that can begin within the first hours of co-incubation; however, the metabolites participating in this initial interaction are not yet identified. Nuclear magnetic resonance (NMR) was used in the present study to characterize the metabolites exuded by two strains of C. sorokiniana (UTEX 2714 and UTEX 2805) and A.
View Article and Find Full Text PDFEnviron Microbiol
October 2021
Environmental Microbiology Group, Northwestern Center for Biological Research (CIBNOR), La Paz, Mexico.
The plant-growth-promoting bacterium Azospirillum brasilense is able to associate with the microalgae Chlorella sorokiniana. Attachment of A. brasilense increases the metabolic performances of the microalgae.
View Article and Find Full Text PDFBiology (Basel)
April 2021
The Bashan Institute of Science, 1730 Post Oak Ct, Auburn, AL 36830, USA.
Engineered mutualistic consortia of microalgae and bacteria may be a means of assembling a novel combination of metabolic capabilities with potential biotechnological advantages. Microalgae are promising organisms for the sustainable production of metabolites of commercial interest, such as lipids, carbohydrates, pigments, and proteins. Several studies reveal that microalgae growth and cellular storage of these metabolites can be enhanced significantly by co-cultivation with growth-promoting bacteria.
View Article and Find Full Text PDFAppl Environ Microbiol
March 2021
Department of Biosystems Engineering, Auburn University, Auburn, Alabama, USA
Biobutanol is a valuable biochemical and one of the most promising biofuels. N1-4 is a hyperbutanol-producing strain. However, its strong autolytic behavior leads to poor cell stability, especially during continuous fermentation, thus limiting the applicability of the strain for long-term and industrial-scale processes.
View Article and Find Full Text PDFJ Biotechnol
January 2021
Biosystems Engineering, Auburn University, Auburn, AL 36849, USA. Electronic address:
Microorganisms
September 2020
Centro de Investigación en Biotecnología, Universidad Autónoma del Estado de Morelos, Cuernavaca 62209, Morelos, Mexico.
Phosphorus (P) is considered a scarce macronutrient for plants in most tropical soils. The application of rock phosphate (RP) has been used to fertilize crops, but the amount of P released is not always at a necessary level for the plant. An alternative to this problem is the use of Phosphorus Solubilizing Microorganisms (PSM) to release P from chemically unavailable forms.
View Article and Find Full Text PDFBioresour Technol
September 2020
Department of Biosystems Engineering, Auburn University, Auburn, AL 36849, USA; Center for Bioenergy and Bioproducts, Auburn University, Auburn, AL 36849, USA. Electronic address:
Furan aldehydes and phenolic compounds generated during biomass pretreatment can inhibit fermentation for biofuel production. Efflux pumps actively transport small molecules out of cells, thus sustaining normal microbial metabolism. Pseudomonas putida has outstanding tolerance to butanol and other small molecules, and we hypothesize that its efflux pump could play essential roles for such robustness.
View Article and Find Full Text PDFMicroorganisms
November 2019
Laboratorio de Biorremediación, Facultad de Ciencias Agropecuarias y Forestales, Departamento de Ciencias Forestales, Universidad de La Frontera, Temuco 4780000, Chile.
The microbiological interactions of the roots of non-photosynthetic plants in South America have been scarcely explored. This study analyzes culturable fungal diversity associated with the mycoheterotrophic plant Phil. (Corsiaceae) in southern Chile, growing in two different understoreys of native (-dominated) and mixed forest (native, and ).
View Article and Find Full Text PDFMicrob Ecol
May 2019
Environmental Microbiology Group, Northwestern Center for Biological Research (CIBNOR), Av. IPN 195, 23096, La Paz, BCS, Mexico.
The effect of three different nutritional conditions during the initial 12 h of interaction between the microalgae Chlorella sorokiniana UTEX 2714 and the plant growth-promoting bacterium Azospirillum brasilense Cd on formation of synthetic mutualism was assessed by changes in population growth, production of signal molecules tryptophan and indole-3-acetic acid, starch accumulation, and patterns of cell aggregation. When the interaction was supported by a nutrient-rich medium, production of both signal molecules was detected, but not when this interaction began with nitrogen-free (N-free) or carbon-free (C-free) media. Overall, populations of bacteria and microalgae were larger when co-immobilized.
View Article and Find Full Text PDFMicrobiol Res
December 2018
Grupo de Investigación en Ciencias Biológicas y Bioprocesos (CIBIOP), Department of Biological Sciences, Universidad EAFIT, Cra. 49 # 7 Sur-50, Medellín, Antioquia, Colombia. Electronic address:
Bacillus subtilis EA-CB0575 is a plant growth-promoting bacterium (PGPB) associated with banana and tomato crops. Root colonization is an important trait for PGPB microorganisms and potentiates the bacterial effect related to the mechanisms of plant growth promotion. Therefore, detection of bacterial colonization of roots in different culture systems is important in the study of plant-microorganism interactions.
View Article and Find Full Text PDFMycorrhiza
October 2018
Laboratorio de Biorremediación, Facultad de Ciencias Agropecuarias y Forestales, Departamento de Ciencias Forestales, Universidad de La Frontera, Temuco, Chile.
The adaptation and performance of orchid mycorrhizae in heavy metal-polluted soils have been poorly explored. In the present study, proteomic and metabolic approaches were used to detect physiological changes in orchid roots established in a heavy metal-polluted soil and to ascertain whether mycorrhizal fungi affect the metabolic responses of roots. Young Bipinnula fimbriata plantlets were established in control and heavy metal-polluted soils in a greenhouse.
View Article and Find Full Text PDFJ Microbiol Methods
April 2017
Environmental Microbiology Group, Northwestern Center for Biological Research (CIBNOR), Calle IPN 195, La Paz, B.C.S. 23096, Mexico; The Bashan Institute of Science, 1730 Post Oak Court, Auburn, AL 36830, USA; Dept. of Entomology and Plant Pathology, 301 Funchess Hall, Auburn University, Auburn, AL 36849, USA. Electronic address:
Isolation of nucleic acids from Chlorella is difficult, given the chemically complex nature of their cell walls and variable production of metabolites. Immobilization of microalgae in polymers adds additional difficulty. Here, we modified, amended, and standardized methods for isolation of nucleic acids and compared the yield of DNA and RNA from free-living and encapsulated microalgae C.
View Article and Find Full Text PDFSci Rep
February 2017
Environmental Microbiology Group, Northwestern Center for Biological Research (CIBNOR), Av IPN 195, La Paz, B.C.S. 23096, Mexico.
Remote effects (occurring without physical contact) of two plant growth-promoting bacteria (PGPB) Azospirillum brasilense Cd and Bacilus pumilus ES4 on growth of the green microalga Chlorella sorokiniana UTEX 2714 were studied. The two PGPB remotely enhanced the growth of the microalga, up to six-fold, and its cell volume by about three-fold. In addition to phenotypic changes, both bacteria remotely induced increases in the amounts of total lipids, total carbohydrates, and chlorophyll a in the cells of the microalga, indicating an alteration of the microalga's physiology.
View Article and Find Full Text PDFMycorrhiza
April 2017
Departamento de Ciencias Forestales, Laboratorio de Biorremediación, Facultad de Ciencias Agropecuarias y Forestales, Universidad de La Frontera, Av. Francisco Salazar, 01145, Temuco, Chile.
Little is known about Orchidaceae plants in Chile and their mycorrhizal associations, a key issue for designing protective actions for endangered species. We investigated root fungi from seven terrestrial orchid species to identify potential mycorrhizal fungi. The main characteristics of Rhizoctonia-like fungi were observed under light microscopy, and isolates were identified through PCR-ITS sequencing.
View Article and Find Full Text PDFJ Microbiol Methods
September 2016
The Bashan Institute of Science, 1730 Post Oak Ct., AL 36830, USA; Environmental Microbiology Group, Northwestern Center for Biological Research (CIBNOR), Av. IPN 195, La Paz, B.C.S. 23096, Mexico; Department of Entomology and Plant Pathology, Auburn University, 301 Funchess Hall, Auburn, AL 36849, USA. Electronic address:
Strains of Bacillus subtilis are plant growth-promoting bacteria (PGPB) of many crops and are used as inoculants. PGPB colonization is an important trait for success of a PGPB on plants. A specific probe, based on the 16 s rRNA of Bacillus subtilis, was designed and evaluated to distinguishing, by fluorescence in situ hybridization (FISH), between this species and the closely related Bacillus amyloliquefaciens.
View Article and Find Full Text PDFJ Environ Sci Health A Tox Hazard Subst Environ Eng
August 2016
e Northwestern Center for Biological Research, Division for Terrestrial Biology , La Paz , México.
The current study aimed at quantifying arsenic and lead in feathers from three passerine species that are residents from areas exposed to mining activities (Toxostoma curvirostre, Campylorhynchus brunneicapillus, and Melozone fusca). Lead and As contents in bird feathers and in superficial soil samples were measured with AAS. Levels of these metals were compared between sites exposed and unexposed to mining.
View Article and Find Full Text PDFFEMS Microbiol Ecol
June 2016
Environmental Microbiology Group, The Northwestern Center for Biological Research (CIBNOR), Av. IPN 195, La Paz 23096, Mexico The Bashan Institute of Science, 1730 Post Oak Ct., AL 36830, USA Department of Entomology and Plant Pathology, Auburn University, 301 Funchess Hall, Auburn, AL 36849, USA
During synthetic mutualistic interactions between the microalga Chlorella sorokiniana and the plant growth-promoting bacterium (PGPB) Azospirillum brasilense, mutual exchange of resources involved in producing and releasing the phytohormone indole-3-acetic acid (IAA) by the bacterium, using tryptophan and thiamine released by the microalga, were measured. Although increased activities of tryptophan synthase in C. sorokiniana and indole pyruvate decarboxylase (IPDC) in A.
View Article and Find Full Text PDFJ Environ Sci Health B
July 2016
a Northwestern Center for Biological Research (CIBNOR), Guaymas , SON , México.
This study examines the potential public health risk due to the massive use of organochlorine pesticides (OCs) in agriculture in the Gulf of California. Specimens of the clam Chione californiensis were collected from three coastal lagoons (Yavaros, Altata and Reforma). Sites were classified as polluted/nonpolluted based on the presence/absence of OCs as an indicator of the persistence of these pollutants; in polluted sites, the time elapsed since pesticide application (past or recent) was estimated.
View Article and Find Full Text PDFRes Microbiol
June 2016
Environmental Microbiology Group, Northwestern Center for Biological Research (CIBNOR), Av. IPN 195, La Paz, B.C.S. 23096, Mexico; The Bashan Institute of Science, 1730 Post Oak Court, Auburn, AL 36830, USA; Dept. of Entomology and Plant Pathology, 301 Funchess Hall, Auburn University, Auburn, AL 36849, USA. Electronic address:
Res Microbiol
June 2015
Environmental Microbiology Group, Northwestern Center for Biological Research (CIBNOR), Av. IPN #195, La Paz, B.C.S. 23096, Mexico; The Bashan Institute of Science, 1730 Post Oak Court, Auburn, AL 36830, USA; Dept. of Entomology and Plant Pathology, 209 Life Sciences Building, Auburn Univ., Auburn, AL 36849, USA. Electronic address:
Accumulation of intra-cellular phosphate, as polyphosphate, was measured when the microalga Chlorella vulgaris was immobilized in alginate with either of two wild-type strains of the microalgae growth-promoting bacterium Azospirillum brasilense or their corresponding IAA-attenuated mutants. Wild type strains of A. brasilense induced higher amounts of intra-cellular phosphate in Chlorella than their respective mutants.
View Article and Find Full Text PDFRes Microbiol
August 2015
Environmental Microbiology Group, Northwestern Center for Biological Research (CIBNOR), Calle IPN 195, La Paz, B.C.S. 23096, Mexico; The Bashan Foundation, 3740 NW Harrison Blvd., Corvallis, OR 97330, USA; Department of Entomology and Plant Pathology, 209 Life Sciences Building, Auburn University, Auburn, AL 36849, USA. Electronic address:
Accumulation of intracellular ammonium and activities of the enzymes glutamine synthetase (GS) and glutamate dehydrogenase (GDH) were measured when the microalgae Chlorella vulgaris was immobilized in alginate with either of two wild type strains of Azospirillum brasilense or their corresponding indole-3-acetic acid (IAA)-attenuated mutants. After 48 h of immobilization, both wild types induced higher levels of intracellular ammonium in the microalgae than their respective mutants; the more IAA produced, the higher the intracellular ammonium accumulated. Accumulation of intracellular ammonium in the cells of C.
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