6 results match your criteria: "Newcastle University Protein and Proteome Analysis (NUPPA)[Affiliation]"
Int J Anal Chem
October 2021
Newcastle University Protein and Proteome Analysis (NUPPA), Newcastle Upon Tyne, UK.
Venous thromboembolism (VTE) is an important cause of death following childbirth. Dabigatran etexilate can be a useful prophylaxis in susceptible women during the postpartum period. However, it is not clear whether dabigatran is excreted into breast milk in amounts which can be harmful to the suckling baby.
View Article and Find Full Text PDFAm J Hematol
January 2020
Institute of Cellular Medicine, Newcastle University and Newcastle upon Tyne Hospitals Foundation Trust, Newcastle upon Tyne, UK.
Nat Commun
October 2018
Institute of Genetic Medicine, Newcastle University, Central Parkway, Newcastle upon Tyne, NE1 3BZ, UK.
Mutations in pre-mRNA processing factors (PRPFs) cause autosomal-dominant retinitis pigmentosa (RP), but it is unclear why mutations in ubiquitously expressed genes cause non-syndromic retinal disease. Here, we generate transcriptome profiles from RP11 (PRPF31-mutated) patient-derived retinal organoids and retinal pigment epithelium (RPE), as well as Prpf31 mouse tissues, which revealed that disrupted alternative splicing occurred for specific splicing programmes. Mis-splicing of genes encoding pre-mRNA splicing proteins was limited to patient-specific retinal cells and Prpf31 mouse retinae and RPE.
View Article and Find Full Text PDFAtherosclerosis
February 2018
Molecular and Cellular Therapeutics, Royal College of Surgeons in Ireland, RCSI, Dublin, Ireland.
Background And Aims: Elevated urinary 11-dehydro thromboxane B (TxB), a measure of thromboxane A formation in vivo, predicts future atherothrombotic events. To further understand this relationship, the genetic determinants of 11-dehydro TxB and their associations with cardiovascular morbidity were investigated in this study.
Methods: Genome-wide and targeted genetic association studies of urinary 11-dehydro TxB were conducted in 806 Anglo-Scandinavian Cardiac Outcomes Trial (ASCOT) participants.
Environ Microbiol Rep
October 2017
School of Civil Engineering and Geosciences, Newcastle University, Newcastle upon Tyne NE1 7RU, UK.
Interpretation of bacteriohopanepolyol (BHP) biomarkers tracing microbiological processes in modern and ancient sediments relies on understanding environmental controls of production and preservation. BHPs from methanotrophs (35-aminoBHPs) were studied in methane-amended aerobic river-sediment incubations at different temperatures. It was found that: (i) With increasing temperature (4°C-40°C) a 10-fold increase in aminopentol (associated with Crenothrix and Methylobacter spp.
View Article and Find Full Text PDFRapid Commun Mass Spectrom
October 2016
School of Civil Engineering and Geosciences, Newcastle University, Newcastle upon Tyne, NE1 7RU, UK.
Rationale: Traditional investigation of bacteriohopanepolyols (BHPs) has relied on derivatisation by acetylation prior to gas chromatography/mass spectrometry (GC/MS) or liquid chromatography/MS (LC/MS) analysis. Here, modern chromatographic techniques (ultrahigh-performance liquid chromatography (UPLC)) and new column chemistries were tested to develop a method for BHP analysis without the need for derivatisation.
Methods: Bacterial culture and sedimentary lipid extracts were analysed using a Waters Acquity Xevo TQ-S triple quadrupole mass spectrometer in positive ion atmospheric pressure chemical ionisation (APCI) mode.