171 results match your criteria: "National Centre for Microbial Resource[Affiliation]"

We isolated endophytic strains from the healthy roots, stems, and leaves of to investigate their plant growth-promoting activities in vitro. Subsequently, Indole acetic acid (IAA) was quantified and the gene (responsible for IAA synthesis in fungi) was amplified and sequenced. Finally, a germination assay was performed with seeds of and a plant growth assay with protocorms of to test their plant growth-promoting activities.

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The genus , known for its melanized, yeast-like appearance, includes a diverse group of fungi with significant implications across various fields. An isolate representing a novel species was identified within this genus from a ginger tuber from India, based on morphological characteristics and molecular phylogenetic analysis. Phylogenetic analysis of the D1/D2 domain of the 26S LSU rRNA gene, SSU rRNA gene and the internal transcribed spacer (ITS) region confirmed this strain as a new species.

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Anaerobic bacteria and methanogenic archaea at municipal landfill dumping sites play a vital role in the landfill ecology, waste degradation, global warming and climate change. Although landfill works as a cheap way of solid waste management, unmanaged landfill plays a significant role in spreading pollutants and pathogens in natural ecosystems. The genera and are important groups of anaerobic microbes from a public and environmental health perspective.

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Geothermal habitats present a unique opportunity to study microbial adaptation to varying temperature conditions. In such environments, distinct temperature gradients foster diverse microbial communities, each adapted to its optimal niche. However, the complex dynamics of bacterial populations in across these gradients high-altitude hot springs remain largely unexplored.

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Article Synopsis
  • - Pelagic transport and oil tanker routes in southern Asia contribute to significant oil pollution, worsened by nutrient runoff from various sources, which affects the Indian Territory.
  • - Research indicates that oil spills and hazardous waste lead to high levels of faunal mortality, with microbiome analyses revealing diverse and concerning microbial profiles.
  • - The presence of antibiotic-resistant bacteria in coastal soils of Goa and Andhra Pradesh highlights the risks posed to biodiversity and human health due to pollution and frequent recreational activities.
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Article Synopsis
  • A novel halotolerant yeast strain, GUBPC1, was discovered in Goa's solar salterns, capable of withstanding NaCl concentrations from 0 to 20%.
  • Under varying salt levels, GUBPC1 exhibits unique morphological changes, from oval shapes to filamentous forms, and produces melanin as an intracellular pigment.
  • Whole-genome sequencing revealed a 26.93 Mb genome with 9383 protein-coding genes, including various enzymes that could enhance its potential for biotechnological applications, such as plant polymer degradation.
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The role of new dengue vaccines in curtailing the emerging global threat of dengue outbreaks arising from mass gathering sporting and religious events.

Int J Infect Dis

November 2024

Centre for Clinical Microbiology, Division of Infection and Immunity, University College London, London, UK; National Institutes of Health Research (NIHR) Biomedical Research Centre, University College London Hospitals NHS Foundation Trust, London, UK.

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Assessing the impact of heavy metals on bacterial diversity in coastal regions of Southeastern India.

Environ Monit Assess

August 2024

Department of Biotechnology, School of Biosciences and Technology, Vellore Institute of Technology, Vellore, 632014, India.

Globally, there is growing concern over the environmental contamination of coastal ecosystems caused by anthropogenic activities. Here,we performed a study to evaluate the degree of heavy metal contamination in 5 different sediment samples collected from five sites along the Southeastern coast of India. Additionally, the research aims to explore the potential ecological implications of heavy metal contamination on the bacterial diversity, a crucial factor in upholding a sustainable ecosystem.

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Novel species of fungi described in this study include those from various countries as follows: , in leaves of , among deep leaf litter, from uredinium of on , on well-rotted twigs and litter in mixed wet sclerophyll and subtropical rainforest. , on twigs of , on bark, in savannas with shrubs and trees. , on leaves of , (incl.

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Protocol for enriching, isolating, and testing drug susceptibility of facultative anaerobic fungi.

STAR Protoc

September 2024

National Centre for Microbial Resource (NCMR), National Centre for Cell Science (NCCS), Pune, Maharashtra 411007, India; Symbiosis Centre for Climate Change and Sustainability (SCCCS), Symbiosis International (Deemed University), Lavale, Pune 412115, India; National Centre for Cell Sciences, NCCS Complex, University of Pune Campus, Pune University Road, Ganeshkhind, Pune, Maharashtra 411007, India. Electronic address:

Research on fungi under anaerobic conditions is limited but crucial for understanding their ecological and pathological impacts. Here, we present a protocol for enriching, isolating, and characterizing anaerobic fungi from environmental and clinical samples. We also describe steps for evaluating the anaerobic growth potential and drug susceptibility of fungal pathogens.

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Alkalimonas mucilaginosa sp. nov. and Alkalimonas cellulosilytica sp. nov. isolated from alkaline Lonar lake, India.

Antonie Van Leeuwenhoek

June 2024

National Centre for Microbial Resource (NCMR), National Centre for Cell Science, NCCS Complex, Savitribai Phule Pune University Campus, Ganeshkhind Road, Pune, 411007, Maharashtra State, India.

Two alkaliphilic, Gram-stain-negative bacterial strains (MEB004 and MEB108) were isolated from water samples collected from Lonar lake, India. The phylogenetic analysis of their 16S rRNA gene sequences showed the highest similarity to A. delamerensis DSM 18314 (98.

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Cryoconite holes (water and sediment-filled depressions), found on glacier surfaces worldwide, serve as reservoirs of microbes, carbon, trace elements, and nutrients, transferring these components downstream via glacier hydrological networks. Through targeted amplicon sequencing of carbon and nitrogen cycling genes, coupled with functional inference-based methods, we explore the functional diversity of these mini-ecosystems within Antarctica and the Himalayas. These regions showcase distinct environmental gradients and experience varying rates of environmental change influenced by global climatic shifts.

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The Antarctic continent hosts exceptional niches, making it an ideal environment for studying polyextremophilic microorganisms. These organisms are uniquely shaped by the geographic niches and variations in soil types. Here we present, a culture-independent approach using DNA metabarcoding to assess the bacterial communities associated with accumulated snow and exposed sediments across different Antarctic islands situated in the Larsemann Hills, Antarctica.

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Background: Coastal areas are subject to various anthropogenic and natural influences. In this study, we investigated and compared the characteristics of two coastal regions, Andhra Pradesh (AP) and Goa (GA), focusing on pollution, anthropogenic activities, and recreational impacts. We explored three main factors influencing the differences between these coastlines: The Bay of Bengal's shallower depth and lower salinity; upwelling phenomena due to the thermocline in the Arabian Sea; and high tides that can cause strong currents that transport pollutants and debris.

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f.a. sp. nov., a novel ascomycetous yeast species isolated from flowers of in India.

Int J Syst Evol Microbiol

May 2024

UCIBIO, Departamento de Ciências da Vida, Faculdade de Ciências e Tecnologia, Universidade Nova de Lisboa, 2829-516 Caparica, Portugal.

Two isolates representing a novel species of the genus were obtained in India from nectar of flowers of , an ornamental exotic species native to Central and South America. Phylogenetic analyses of the D1/D2 domain of the 26S large subunit (LSU) rRNA gene, internal transcribed spacer (ITS) region, and physiological characteristics, supported the recognition of the novel species, that we designate sp. nov (MycoBank no.

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A Gram-stain-positive aerobic, rod-shaped, spore-producing bacterium forming colonies with convex elevation and a smooth, intact margin was isolated from a freshwater sample collected from a well situated in an agricultural field. The 16S rRNA gene sequence of the isolated strain BA0131 showed the highest sequence similarity to Lysinibacillus yapensis ylb-03 (99.25%) followed by Ureibacillus chungkukjangi 2RL3-2 (98.

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Background: Biofilm formation is viewed as a vital mechanism in C. glabrata pathogenesis. Although, it plays a significant role in virulence but transcriptomic architecture and metabolic pathways governing the biofilm growth mode of C.

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Unlabelled: The sandal spike disease (SSD), related to . Phytoplasma asteris' (Aster Yellows group), poses a significant threat to Indian sandalwood ( L.), making it the second most expensive wood globally due to declining population density.

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Chryseobacterium demonstrates a diverse environmental presence and a significant pathogenic potential across various ecosystems. This clinical case showcases a rare instance of bacterial infection in a 75-year-old male with untreated diabetes and recurrent urinary tract infections (UTIs). The patient presented symptoms of abdominal pain, burning urination, fever, and an elevated eosinophil count.

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The landfill is a cheap way of solid waste management in developing countries. The majority of landfills are non-sanitary and work as open garbage dumping sites and pose threats to public and environmental health. Therefore, an in-depth understanding of the chemistry and microbiology of landfills is imperative to develop the right policies for landfill management.

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We report a preliminary study of soil from the Central Deccan Plateau dry tropical deciduous forest in India using 16S rRNA gene amplicon sequencing. We report diverse taxa, e.g.

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Mountain biodiversity is under unparalleled pressure due to climate change, necessitating in-depth research on high-altitude plant's microbial associations which are crucial for plant survival under stress conditions. Realizing that high-altitude tree line species of Himalaya are completely unexplored with respect to the microbial association, the present study aimed to elucidate plant growth promoting and secondary metabolite producing potential of culturable endophytic fungi of Himalayan silver birch (Betula utilis D. Don).

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Fictibacillus fluitans sp. nov., isolated from freshwater pond.

Arch Microbiol

January 2024

NCIM-Resource Center, CSIR-National Chemical Laboratory, Pune, Maharashtra, 411008, India.

A Gram-positive, aerobic, rod-shaped, spore-forming bacterium, designated NE201, was isolated from a freshwater pond in Village Nerur, India. Growth was observed in the range of 15-45 °C temperature with optimum at 30 °C, pH range of 5-9 (optimum at 7.0), and at concentrations of NaCl ranging between 0 and 14% (optimum 0%, w/v).

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