78 results match your criteria: "Namur Institute of Structured Matter (NISM)[Affiliation]"

The urgent need for solar electricity production is critical for ensuring energy security and mitigating climate change. Achieving the optimal optical bandgap and effective carrier separation, essential for high-efficiency solar cells, remains a significant challenge when utilizing a single material. In this study, we design a BAs/GeC heterostructure using density functional theory.

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Regulation of potassium uptake in .

J Bacteriol

September 2024

Bacterial Cell cycle & Development (BCcD), Biology of Microorganisms Research Unit (URBM), Namur Research Institute for Life Science (NARILIS), Universite de Namur, Namur, Belgium.

Potassium (K) is an essential physiological element determining membrane potential, intracellular pH, osmotic/turgor pressure, and protein synthesis in cells. Here, we describe the regulation of potassium uptake systems in the oligotrophic α-proteobacterium known as a model for asymmetric cell division. We show that can grow in concentrations from the micromolar to the millimolar range by mainly using two K transporters to maintain potassium homeostasis, the low-affinity Kup and the high-affinity Kdp uptake systems.

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Intrinsic disorder and salt-dependent conformational changes of the N-terminal region of TFIP11 splicing factor.

Int J Biol Macromol

October 2024

Laboratory of Physical Chemistry of Biomolecules, UCPTS, University of Namur, Rue de Bruxelles 61, B-5000 Namur, Belgium; Namur Research Institute for Life Sciences (NARILIS), University of Namur, Namur, Belgium; Namur Institute of Structured Matter (NISM), University of Namur, Namur, Belgium. Electronic address:

Tuftelin Interacting Protein 11 (TFIP11) was identified as a critical human spliceosome assembly regulator, interacting with multiple proteins and localising in membrane-less organelles. However, a lack of structural information on TFIP11 limits the rationalisation of its biological role. TFIP11 is predicted as an intrinsically disordered protein (IDP), and more specifically concerning its N-terminal (N-TER) region.

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Cellulose nanocrystals (CNCs) have inspired the synthesis of various advanced nanomaterials, opening opportunities for different applications. However, a simple and robust approach for transferring the long-range chiral nematic nanostructures into TiO photocatalyst is still fancy. Herein, a successful fabrication of freestanding TiO films maintaining their macroscopic chiral nematic structures after removing the CNCs biotemplate is reported.

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Structure-reactivity investigations and quantum-chemical parametrization of steric and electronic properties of geometrically constrained iminophosphoranes enabled the design of new frustrated Lewis pairs and revealed unusual properties at the phosphonium center embedded in the cage-shaped triptycene tricyclic scaffold.

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Light on the interactions between nanoparticles and lipid membranes by interface-sensitive vibrational spectroscopy.

Colloids Surf B Biointerfaces

September 2024

Laboratory of Lasers and Spectroscopies (LLS), Namur Institute of Structured Matter (NISM) and NAmur Institute for Life Sciences (NARILIS), University of Namur (UNamur), Belgium. Electronic address:

Nanoparticles are produced in natural phenomena or synthesized artificially for technological applications. Their frequent contact with humans has been judged potentially harmful for health, and numerous studies are ongoing to understand the mechanisms of the toxicity of nanoparticles. At the macroscopic level, the toxicity can be established in vitro or in vivo by measuring the survival of cells.

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Vertical heterostructure of graphite-MoS for gas sensing.

Nanoscale Horiz

July 2024

Department of Physics and Astronomy, University of Sussex, Brighton BN1 9RH, UK.

2D materials, given their form-factor, high surface-to-volume ratio, and chemical functionality have immense use in sensor design. Engineering 2D heterostructures can result in robust combinations of desirable properties but sensor design methodologies require careful considerations about material properties and orientation to maximize sensor response. This study introduces a sensor approach that combines the excellent electrical transport and transduction properties of graphite film with chemical reactivity derived from the edge sites of semiconducting molybdenum disulfide (MoS) through a two-step chemical vapour deposition method.

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The corrosion of metals is still a huge challenge for various industries, and the pursuit of effective treatments ensures environmental sustainability. In this study, we utilized banana sap-water extract (BSWE) to prevent mild steel from electrochemical corrosion in a 0.1 M HCl at room temperature.

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Sputtering of silicon in a He magnetron discharge (MS) has been reported as a bottom-up procedure to obtain He-charged silicon films (i.e., He nanobubbles encapsulated in a silicon matrix).

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In-depth investigation of the effect of pH on the autofluorescence properties of DPF3b and DPF3a amyloid fibrils.

Spectrochim Acta A Mol Biomol Spectrosc

May 2024

Laboratoire de Chimie Physique des Biomolécules, UCPTS, University of Namur, 61 rue de Bruxelles, 5000 Namur, Belgium; Namur Institute of Structured Matter (NISM), University of Namur, 61 rue de Bruxelles, 5000 Namur, Belgium; Namur Research Institute for Life Sciences (NARILIS), University of Namur, 61 rue de Bruxelles, 5000 Namur, Belgium. Electronic address:

Article Synopsis
  • DPF3 protein has two splicing variants, DPF3b and DPF3a, linked to human cancer and neurodegeneration, and both can form amyloid fibrils that exhibit a unique deep-blue autofluorescence.
  • The study explored how changing pH and excitation wavelength affects the autofluorescence of these isoforms, revealing different emission modes (violet, deep-blue, and blue-green) and unique photophysical behaviors for each variant.
  • This research suggests that variations in autofluorescence and the structural differences in fibrillar assemblies of DPF3b and DPF3a are influenced by their amino acid compositions and pH-induced changes in molecular interactions.
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Indium-Based Silica Materials: Sustainable Syntheses Combined with a Challenging Insertion in SiO Mesoporous Structures.

Molecules

December 2023

Laboratoire de Chimie des Matériaux Appliqués, Department of Chemistry, Namur Institute of Structured Matter (NISM), University of Namur, 5000 Namur, Belgium.

Optimized sustainable procedures in both acidic and basic conditions are considered to meet some of the current environmental challenges of the scientific community. In this paper, the successful syntheses of two classes of indium-based silica nanomaterials are reported. Both procedures were conceived to enhance the sustainability of the synthesis methods and promote their preparations at room temperature while avoiding the hydrothermal treatment under static conditions at 100 °C.

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Imidazolium-Containing Hybrid Organic-Inorganic Materials for the Conversion of CO: Unveiling the Key Role of the Ionic Template.

Inorg Chem

December 2023

Laboratoire de Chimie des Matériaux Appliqués, Department of Chemistry, Namur Institute of Structured Matter (NISM), University of Namur, 5000 Namur, Belgium.

A straightforward synthesis of a series of hybrid organic-inorganic materials (HOIMs) containing imidazolium moieties was achieved. The preparation of the imidazolium acetate precursor was performed in a single-step procedure using the Debus-Radziszewski reaction. The as-synthesized alkoxysilane was employed in combination with tetraethyl orthosilicate to generate an HOIM presenting a high specific surface area.

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Understanding the surrounding effects on Raman optical activity signatures of a chiral cage system: Cryptophane-PP-111.

Spectrochim Acta A Mol Biomol Spectrosc

February 2024

Theoretical Chemistry Laboratory (LCT), Namur Institute of Structured Matter (NISM), University of Namur, 5000 Namur, Belgium.

Cryptophane molecules are cage-like structures consisting in two hemispheres, each made of three benzene rings. These hemispheres are bound together with three O(CH)Olinkers of various lengths giving rise to a plethora of cryptophane derivatives. Moreover, they are able to encapsulate neutral guests: CHCl, CHCl, …; and charged species: Cs, Tl, ….

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In the present work, the bond breaking/forming events along the intramolecular Diels-Alder (IMDA) reaction of (2,4,6)-2(allyloxy)cycloocta-2,4,6-trien-1-one have been revealed within bonding evolution theory (BET) at the density functional theory level, using the M05-2X functional with the cc-pVTZ basis set. Prior to achieving this task, the energy profiles and stationary points at the potential energy surface (PES) have been characterized. The analysis of the results finds that this rearrangement can proceed along three alternative reaction pathways (a-c).

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Single crystal formation in core-shell capsules.

Chem Commun (Camb)

October 2023

Secoya Technologies Fond des Més 4, Louvain-la-Neuve 1348, Belgium.

This work extends the scope of microfluidic-based crystallization methods by introducing solid microcapsules. Hundreds of perfectly similar microcapsules were generated per second, allowing a fast screening of crystallization conditions. XRD analyses were performed directly on encapsulated single crystals demonstrating the potential of this process for the characterization of compounds, including screening polymorphism.

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The Facile Hydrolysis of Imidazolinium Chlorides (N-Heterocyclic Carbene Precursors) Under Basic Aqueous Conditions.

Chemistry

December 2023

Laboratory of Catalysis, MolSys Research Unit, Université de Liège, Institut de Chimie Organique (B6a), Allée du six Août 13, 4000, Liège, Belgium.

The hydrolysis of imidazolinium chlorides takes place readily in a basic water/dichloromethane biphasic mixture at room temperature. Experimental parameters were optimized to afford full conversions and high yields of γ-aminoformamides starting from twelve symmetrical substrates with alkyl or aryl substituents on their nitrogen atoms, and five unsymmetrical 1-alkyl-3-arylimidazolinium chlorides. NMR and XRD analyses showed that the cleavage of unsymmetrical salts led to γ-alkylamino-N-arylformamides with a high regioselectivity and that bulky alkyl or aryl groups on the formamide moiety led to the isolation of the (E)-isomer in high stereoisomeric purity (>95 %), whereas smaller and more flexible alkyl substituents afforded mixtures of (E)- and (Z)-rotamers.

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A cytoplasmic chemoreceptor and reactive oxygen species mediate bacterial chemotaxis to copper.

J Biol Chem

October 2023

Research Unit in Biology of Microorganisms (URBM), Department of Biology, Namur Research Institute for Life Sciences (NARILIS), University of Namur, Namur, Belgium. Electronic address:

Chemotaxis is a widespread strategy used by unicellular and multicellular living organisms to maintain their fitness in stressful environments. We previously showed that bacteria can trigger a negative chemotactic response to a copper (Cu)-rich environment. Cu ion toxicity on bacterial cell physiology has been mainly linked to mismetallation events and reactive oxygen species (ROS) production, although the precise role of Cu-generated ROS remains largely debated.

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Calculation of the one- and two-photon absorption spectra of water-soluble stilbene derivatives using a multiscale QM/MM approach.

J Chem Phys

July 2023

Universidade de São Paulo, Instituto de Física, Rua do Matão 1371, 05508-090 São Paulo, SP, Brazil.

We calculated the one- (OPA) and two-photon absorption (TPA) spectra of two large water-soluble stilbene derivatives presenting TPA cross sections of about 400 GM. However, the reported experimental TPA spectra present a spectral gap region, and a theoretical study of these promising molecules seems now timely and relevant. These molecules are composed of 200 or more atoms, becoming a challenge to obtain the TPA spectra even using density functional theory at the time-dependent quadratic response formalism.

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Human indoleamine-2,3-dioxygenase 2 cofactor lability and low substrate affinity explained by homology modeling, molecular dynamics and molecular docking.

J Biomol Struct Dyn

June 2024

Department of Chemistry, Laboratoire de Chimie Biologique Structurale (CBS), Namur Institute of Structured Matter (NISM), Namur Research Institute for Life Science (NARILIS), University of Namur (UNamur), Namur, Belgium.

The human indoleamine-2,3-dioxygenase 2 (hIDO2) protein is growing of interest as it is increasingly implicated in multiple diseases (cancer, autoimmune diseases, COVID-19). However, it is only poorly reported in the literature. Its mode of action remains unknown because it does not seem to catalyze the reaction for which it is attributed: the degradation of the L-Tryptophan into N-formyl-kynurenine.

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Book production by medieval scriptoria have gained growing interest in recent studies. In this context, identifying ink compositions and parchment animal species from illuminated manuscripts is of great importance. Here, we introduce time-of-flight secondary ion mass spectrometry (ToF-SIMS) as a non-invasive tool to identify both inks and animal skins in manuscripts, at the same time.

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Manipulating multi-spectral slow photons in bilayer inverse opal TiO@BiVO composites for highly enhanced visible light photocatalysis.

J Colloid Interface Sci

October 2023

Laboratory of Inorganic Materials Chemistry (CMI), University of Namur, Rue de Bruxelles, 61, 5000 Namur, Belgium; State Key Laboratory of Advanced Technology for Material Synthesis and Processing, Wuhan University of Technology, Wuhan 430070, Hubei, China. Electronic address:

Manipulation of light has been proved to be a promising strategy to increase light harvesting in solar-to-chemical energy conversion, especially in photocatalysis. Inverse opal (IO) photonic structures are highly promising for light manipulation as their periodic dielectric structures enable them to slow down light and localize it within the structure, thereby improving light harvesting and photocatalytic efficiency. However, slow photons are confined to narrow wavelength ranges and hence limit the amount of energy that can be captured through light manipulation.

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The shape effect and its consequences for polar surfaces and for heterogeneous catalysis.

Phys Chem Chem Phys

May 2023

Department of Chemistry and Biochemistry, University of California, Santa Barbara, California 93106, USA.

In this paper we develop the shape effect, which is relevant for crystalline materials whose size is larger than that of the thermodynamic limit. According to this effect the electronic properties of one surface of a crystal depend upon all of its surfaces, on the overall shape. At first, qualitative mathematical arguments are presented for the existence of this effect based on the conditions for the stability of polar surfaces.

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Second Harmonic Generation Signatures of Supramolecular Assemblies Based on Amide Moieties.

Chemphyschem

July 2023

Laboratory of Theoretical Chemistry, Namur Institute of Structured Matter (NISM), University of Namur, rue de Bruxelles, 61, 5000, Namur, Belgium.

Targeting the use of the second harmonic generation (SHG) as a bioimaging technique to unravel the formation of aggregates, the SHG first hyperpolarizabilities ( ) of assemblies of benzene-1,3,5-tricarboxamide derivatives have been evaluated at the density functional theory level. Calculations have revealed that i) the assemblies exhibit SHG responses and the total first hyperpolarizability responses of the aggregates are evolving with their size. The largest aggregation effect is a 18-times increase for of B4 when going from the monomer to the pentamer, that ii) the intrinsic SHG responses described by the hyper-Rayleigh Scattering are enhanced in presence of iodine atoms on the phenyl core, that iii) the side chains affect the relative orientation of the dipole moment and first hyperpolarizability vectors, which impacts more the EFISHG quantities than their moduli, and that iv) the radial component to is dominant for the compounds having the largest responses.

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Properties of Naked Silver Clusters with Up to 100 Atoms as Found with Embedded-Atom and Density-Functional Calculations.

Molecules

April 2023

Laboratory of Theoretical Chemistry, Department of Chemistry, Namur Institute of Structured Matter (NISM), University of Namur, Rue de Bruxelles 61, 5000 Namur, Belgium.

The structural and energetic properties of small silver clusters Agn with = 2-100 atoms are reported. For = 2-100 the embedded atom model for the calculation of the total energy of a given structure in combination with the basin-hopping search strategy for an unbiased structure optimization has been used to identify the energies and structures of the three energetically lowest-lying isomers. These optimized structures for = 2-11 were subsequently studied further through density-functional-theory calculations.

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Probing the human epidermis by combining ToF-SIMS and multivariate analysis.

Biointerphases

February 2023

Laboratoire Interdisciplinaire de Spectroscopie Electronique (LISE), Namur Institute of Structured Matter (NISM), Namur 5000, Belgium.

The mammalian organism is continuously exposed to various biological and chemical threats from its surroundings. In order to provide protection against these threats, mammals have developed a specialized defense system at the interface with their environment. This system, known as the epidermis, is mainly composed of stratified keratinocytes organized in a complex self-renewing structure providing a mechanical and chemical barrier at the skin surface.

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