496 results match your criteria: "Nagahama Institute of Bio-science and Technology[Affiliation]"

This study aimed to assess fatigue using a noninvasive, quantitative, and simple method using salivary chromogranin A (CgA). In total, 171 adults participated in this study. We used the Cornell Medical Index (CMI) as a questionnaire that included a fatigability section.

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Self-incompatibility (SI) is a genetic mechanism to prevent self-fertilization and thereby promote outcrossing in hermaphroditic plant species through discrimination of self and nonself-pollen by pistils. In many SI systems, recognition between pollen and pistils is controlled by a single multiallelic locus (called the S-locus), in which multiple alleles (called S-alleles) are segregating. Because of the extreme level of polymorphism of the S-locus, identification of S-alleles has been a major issue in many SI studies for decades.

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Guanylate cyclase C (GC-C), a receptor expressed on the apical membrane of intestinal mucosal cells, is activated by heat-stable enterotoxin (STa) produced by enterotoxigenic Escherichia coli, as well as the endogenous ligands guanylin and uroguanylin. In this study, novel peptides that interact with GC-C were generated using the cDNA display method, and their binding affinity and biological activity were evaluated. While the linear peptide library did not yield peptides with sufficient affinity for GC-C, three cyclic peptides (GCC-P1, GCC-P2, and GCC-P3), each containing two cysteine residues within a 15-residue sequence, were obtained from a cyclic peptide library containing nine-residue random sequences.

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A novel strategy to protect prokaryotic cells from virus infection.

Eng Microbiol

June 2024

Department of Bioscience and Biotechnology, Graduate school of Bioresource and Bioenvironmental Sciences, Kyushu University, Fukuoka 819-0395, Japan.

Article Synopsis
  • The discovery of the CRISPR-Cas system emphasizes that we still have a lot to learn about how bacteria and archaea defend against viruses.
  • Researchers are continuously finding new immune systems in prokaryotes, which adds to our understanding of viral defense.
  • A recent study identified a new enzyme (glycosylase) that targets a specific modified base in the T4 phage genome, preventing the virus from replicating by creating an abasic site.
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Efficient photocatalytic hydrogen production by bacteriochlorophyll-a derivatives with different esterifying side chains.

J Colloid Interface Sci

October 2023

Key Laboratory of Physics and Technology for Advanced Batteries (Ministry of Education) & State Key Laboratory of Superhard Materials, College of Physics, Jilin University, Changchun 130012, PR China. Electronic address:

Article Synopsis
  • * Bacteriochlorophyll (BChl), essential for photosynthesis, was combined with TiCT MXene to create five composite photocatalysts aimed at enhancing hydrogen production under visible light.
  • * Among the variations, BChl-5 with a quaternary ammonium group achieved the highest hydrogen production rate of 51 μmol/h/g due to its strong self-aggregation and excellent electric charge transport with TiCT MXene.
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We previously reported that choline chloride and N-allylglycine stimulate photosynthesis in wheat protoplasts. Treatment of Arabidopsis thaliana and Brassica rapa plants with both compounds promoted growth and photosynthesis. To clarify the relationship between the enhancement of photosynthesis and increased growth, A.

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Article Synopsis
  • - Sleep apnea syndrome (SAS) impacts cardiovascular and dental health, and its diagnosis often involves measuring blood oxygen saturation (SpO) through pulse oximetry, assessed using the oxygen desaturation index (ODI) to indicate severity.
  • - A study with 63 young adults (ages 20-32) found that lower SpO levels during sleep corresponded to decreased parasympathetic nervous system activity (PSNA), suggesting a connection between oxygen levels and nervous system regulation during rest.
  • - Participants with an ODI greater than 5 events/h experienced notably lower PSNA during normal oxygen levels, indicating that high ODI could signify reduced PSNA during sleep, which might further impact overall sleep quality; addressing high ODI could
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Clinical Utility of Synthesized 18-Lead Electrocardiography.

Sensors (Basel)

September 2024

Graduate School of Science, Technology and Innovation, Kobe University, Kobe 657-8501, Japan.

Eighteen-lead electrocardiography (18-ECG) includes, in addition to those in standard 12-lead ECG (12-ECG), six additional chest leads: V7-V9 and V3RV5R. Leads V7-V9 require the patient to be in a lateral decubitus position for the electrodes to be attached to the back. Synthesized 18-ECG (syn18-ECG) is a method that only records 12-ECG and uses computational logic to record the posterior wall (V7-V9) and right-sided (V3R-V5R) leads.

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Size-dependent ability of AtaA to immobilize cells in Acinetobacter sp. Tol 5.

Sci Rep

September 2024

Department of Biomolecular Engineering, Graduate School of Engineering, Nagoya University, Nagoya, Aichi, 464-8603, Japan.

Microbial cells serve as efficient and environmentally friendly biocatalysts, but their stability and reusability in practical applications must often be improved through immobilization. Acinetobacter sp. Tol 5 shows high adhesiveness to materials due to its large cell surface protein AtaA, which consists of 3630 amino acids (aa).

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Coherent Charge Transfer Reveals a Different Theoretical Limit of Power Conversion Efficiency in Organic Solar Cells.

J Phys Chem Lett

September 2024

Key Laboratory of Physics and Technology for Advanced Batteries (Ministry of Education), College of Physics, Jilin University, Changchun 130012, P. R. China.

The hopping charge transfer (CT) theory is used to explain the dynamics of traditional donor-acceptor (D-A) devices in organic solar cells (OSCs). But it is not applicable to the unconventional OSCs inspired by photosynthesis, referred to as Z-devices. In this study, we establish a universal heterojunction CT model in OSCs, based on the reported coherent CT in photosynthesis.

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Poloxamer 407 (P407) is used as a safety-guaranteed, invaluable pharmaceutical nanocarrier. The aqueous solution of P407 exhibits sol-to-gel and gel-to-sol transitions, specifically during a temperature rise. Here, we develop a method to determine the pair potential between colloidal particles based primarily on experimental small-angle scattering data.

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Activin E upregulates uncoupling protein 1 and fibroblast growth factor 21 in brown adipocytes.

Mol Cell Endocrinol

October 2024

Laboratory of Veterinary Toxicology, College of Bioresource Sciences, Nihon University, Fujisawa, Kanagawa, 252-0880, Japan; Nagahama Institute of Bio-Science and Technology, Nagahama, Shiga, 526-0829, Japan. Electronic address:

Activin E activates brown and beige adipocytes and has been controversially implicated as a factor that induces obesity and fatty liver. Here, we sought to address this controversial issue by producing recombinant human activin E to evaluate its effects on HB2 brown adipocytes in vitro. Activin E increased uncoupling protein 1 (Ucp1) and fibroblast growth factor 21 (Fgf21) mRNA expression in the adipocytes.

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Aiming at the application to photodynamic therapy, natural bacteriochlorophyll-a was converted to chemically stable free-base derivatives possessing different kinds of hydrophilic C17-propionate residues. These semi-synthetic bacteriochlorins were found to have self-assembling ability in an aqueous environment and formed stable J-type aggregates in a cell culture medium containing 0.2% DMSO.

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We determined the complete mitochondrial DNA sequence of a Biwa goby, (Tanaka, 1916) using next-generation sequencing methods. The composition of its mitogenome is the same as that observed in most other vertebrates, comprising of 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and two control regions. Our molecular phylogenetic analysis confirmed the close phylogenetic relationship between and .

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Gsdf is not indispensable for male differentiation in the medaka species Oryzias hubbsi.

Biochem Biophys Res Commun

September 2024

Laboratory of Molecular Reproductive Biology, Institute for Environmental Sciences, University of Shizuoka, Shizuoka, 422-8526, Japan; Department of Environmental Life Sciences, School of Food and Nutritional Sciences, University of Shizuoka, Shizuoka, 422-8526, Japan.

Article Synopsis
  • - The study explores the function of the Gonadal soma-derived growth factor (Gsdf) gene in sex determination within the medaka fish species, Oryzias hubbsi, which has a ZW sex-determination system.
  • - While Gsdf shows male-dominant expression, knockout experiments indicate there’s no sex reversal and that genetic sex determination pathways remain normal without Gsdf, suggesting a different mechanism for sex differentiation in this species.
  • - The loss of Gsdf results in germ cell overproliferation and quicker entry into meiosis in testes but lacks the feminizing effects seen in related species, underscoring the complexity and variability of sex determination across different fish species.
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The role of the STAS domain in SLC26A9 for chloride ion transporter function.

Biophys J

June 2024

Graduate School of Information Sciences, Tohoku University, Sendai, Miyagi, Japan; Tohoku Medical Megabank Organization, Tohoku University, Sendai, Miyagi, Japan; Institute of Development, Aging, and Cancer, Tohoku University, Sendai, Miyagi, Japan. Electronic address:

The anion exchanger solute carrier family 26 (SLC26)A9, consisting of the transmembrane (TM) domain and the cytoplasmic STAS domain, plays an essential role in regulating chloride transport across cell membranes. Recent studies have indicated that C-terminal helices block the entrance of the putative ion transport pathway. However, the precise functions of the STAS domain and C-terminal helix, as well as the underlying molecular mechanisms governing the transport process, remain poorly understood.

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Environmental isolates are promising candidates for new chassis of synthetic biology because of their inherent capabilities, which include efficiently converting a wide range of substrates into valuable products and resilience to environmental stresses; however, many remain genetically intractable and unamenable to established genetic tools tailored for model bacteria. sp. Tol 5, an environmentally isolated Gram-negative bacterium, possesses intriguing properties for use in synthetic biology applications.

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DPPA3 facilitates genome-wide DNA demethylation in mouse primordial germ cells.

BMC Genomics

April 2024

Division of Epigenomics and Development, Medical Institute of Bioregulation, Kyushu University, Fukuoka, 812-8582, Japan.

Background: Genome-wide DNA demethylation occurs in mammalian primordial germ cells (PGCs) as part of the epigenetic reprogramming important for gametogenesis and resetting the epigenetic information for totipotency. Dppa3 (also known as Stella or Pgc7) is highly expressed in mouse PGCs and oocytes and encodes a factor essential for female fertility. It prevents excessive DNA methylation in oocytes and ensures proper gene expression in preimplantation embryos: however, its role in PGCs is largely unexplored.

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Introduction/aims: Duchenne muscular dystrophy (DMD) presents with skeletal muscle weakness, followed by cardiorespiratory involvement. The need for longitudinal data regarding DMD that could serve as a control for determining treatment efficacy in clinical trials has increased notably. The present study examined the longitudinal data of Japanese DMD patients collectively and assessed individual patients with pathogenic variants eligible for exon-skipping therapy.

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Small-angle scattering (SAS) is a powerful tool for the detailed structural analysis of objects at the nanometer scale. In contrast to techniques such as electron microscopy, SAS data are presented as reciprocal space information, which hinders the intuitive interpretation of SAS data. This study presents a workflow: (1) creating objects, (2) 3D scanning, (3) the representation of the object as point clouds on a laptop, (4) computation of a distance distribution function, and (5) computation of SAS, executed via the computer program Phone2SAS.

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The cholecystokinin (CCK)/gastrin family peptides are involved in regulation of feeding and digestion in vertebrates. In the ascidian Ciona intestinalis type A (Ciona robusta), cionin, a CCK/gastrin family peptide, has been identified. Cionin is expressed exclusively in the central nervous system (CNS).

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Insects are a highly diverse phylogeny and possess a wide variety of traits, including the presence or absence of wings and metamorphosis. These diverse traits are of great interest for studying genome evolution, and numerous comparative genomic studies have examined a wide phylogenetic range of insects. Here, we analyzed 22 insects belonging to a wide phylogenetic range (Endopterygota, Paraneoptera, Polyneoptera, Palaeoptera, and other insects) by using a batch-learning self-organizing map (BLSOM) for oligonucleotide compositions in their genomic fragments (100-kb or 1-Mb sequences), which is an unsupervised machine learning algorithm that can extract species-specific characteristics of the oligonucleotide compositions (genome signatures).

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Expressed subtype of paralogous genes in functionally homologous cells sometimes show differences across species, the reasons for which have not been explained. The present study examined hypophysiotropic gonadotropin-releasing hormone (GnRH) neurons in vertebrates to investigate this mechanism. These neurons express either or paralogs, depending on the species, and apparent switching of the expressed paralogs in them occurred at least four times in vertebrate evolution.

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High Myristic Acid in Glycerolipids Enhances the Repair of Photodamaged Photosystem II under Strong Light.

Plant Cell Physiol

May 2024

Department of Life Sciences, Graduate School of Arts and Sciences, The University of Tokyo, 3-8-1 Komaba, Meguro-ku, Tokyo 153-8902, Japan.

Cyanobacteria inhabit areas with a broad range of light, temperature and nutrient conditions. The robustness of cyanobacterial cells, which can survive under different conditions, may depend on the resilience of photosynthetic activity. Cyanothece sp.

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Article Synopsis
  • Xenopus embryos are important for studying vertebrate development, but their opacity limits 3D imaging mostly to surface structures and later-stage tadpoles.
  • Researchers developed a new 3D imaging technique using placental alkaline phosphatase (PLAP) as a transgenic reporter, which allows for better visualization of various tissues in whole embryos.
  • The new method not only improves sensitivity over traditional fluorescence techniques but also enables detailed imaging of deeper tissues like the brain and heart, creating 3D digital reconstructions of the organs.
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