12,821 results match your criteria: "Mellon University[Affiliation]"

Background: We aimed to assess the effects of body mass index (BMI), activities of daily living (ADL), and subjective well-being (SWB) on cognitive impairment and propose dynamic risk prediction models for aging cognitive decline.

Methods: We leveraged the Chinese Longitudinal Healthy Longevity Survey from 1998 to 2018. Cognitive status was measured using the Chinese Mini-Mental State Examination.

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Longitudinal changes in electrophysiology and widefield calcium imaging following electrode implantation.

J Neural Eng

December 2024

Department of Radiology, University of Pittsburgh, 203 Lothrop St, EEI Suite 700, Pittsburgh, PA 15213, United States of America.

. Intracortical microelectrode arrays often fail to deliver reliable signal quality over chronic recordings, and the effect of an implanted recording array on local neural circuits is not completely understood..

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Ligand binding kinetics to evaluate the function and stability of AR in nanodiscs.

Biophys J

December 2024

Department of Chemical Engineering, Carnegie Mellon University, Pittsburgh, Pennsylvania. Electronic address:

G-protein-coupled receptors (GPCRs) represent one of the largest classes of therapeutic targets. However, developing successful therapeutics to target GPCRs is a challenging endeavor, with many molecules failing during in vivo clinical trials due to a lack of efficacy. The in vitro identification of drug-target residence time (1/k) has been suggested to improve predictions of in vivo success.

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This review highlights the sulfur transporters, key enzymes and their encoding genes involved in plant sulfur anabolism, focusing on their occurrence, chemistry, location, function, and regulation within sulfur assimilation pathways. Sulfur, a vital element for plant life, plays diverse roles in metabolism and stress response. This review provides a comprehensive overview of the sulfur assimilation pathway in plants, highlighting the intricate network of enzymes and their regulatory mechanisms.

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Multispectral autofluorescence lifetime imaging systems have recently been developed to quickly and non-invasively assess tissue properties for applications in oral cancer diagnosis. As a non-traditional imaging modality, the autofluorescence signal collected from the system cannot be directly visually assessed by a clinician and a model is needed to generate a diagnosis for each image. However, training a deep learning model from scratch on small multispectral autofluorescence datasets can fail due to inter-patient variability, poor initialization, and overfitting.

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The synthesis, characterization, and reactivity of a NiOH core bearing a tridentate redox-active ligand capable of reaching three molecular oxidation states is presented in this paper. The reduced complex [LNiOH] was characterized by single-crystal X-ray diffraction analysis, depicting a square-planar NiOH core stabilized by intramolecular H-bonding interactions. Cyclic voltammetry measurements indicated that [LNiOH] can be reversibly oxidized to [LNiOH] and [LNiOH] at very negative reduction potentials (-1.

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Motivation: Developing competency in the broad area of bioinformatics is challenging globally, owing to the breadth of the field and the diversity of its audiences for education and training. Course design can be facilitated by the use of a competency framework-a set of competency requirements that define the knowledge, skills and attitudes needed by individuals in (or aspiring to be in) a particular profession or role. These competency requirements can help to define curricula as they can inform both the content and level to which competency needs to be developed.

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Optimizing design of genomics studies for clonal evolution analysis.

Bioinform Adv

December 2024

Ray and Stephanie Lane Computational Biology Department, Carnegie Mellon University, Pittsburgh, PA 15213, United States.

Motivation: Genomic biotechnology has rapidly advanced, allowing for the inference and modification of genetic and epigenetic information at the single-cell level. While these tools hold enormous potential for basic and clinical research, they also raise difficult issues of how to design studies to deploy them most effectively. In designing a genomic study, a modern researcher might combine many sequencing modalities and sampling protocols, each with different utility, costs, and other tradeoffs.

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Background: Longitudinal tracking of multiple sclerosis (MS) symptoms in an individual's own environment may improve self-monitoring and clinical management for people with MS (pwMS).

Objective: We present a machine learning approach that enables longitudinal monitoring of clinically relevant patient-reported symptoms for pwMS by harnessing passively collected data from sensors in smartphones and fitness trackers.

Methods: We divide the collected data into discrete periods for each patient.

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Ultrasound-based geometric modeling of the human ovary with applications to cryopreservation.

Cryobiology

December 2024

Biothermal Technology Laboratory, Department of Mechanical Engineering, Carnegie Mellon University, Pittsburgh, PA, USA. Electronic address:

Successful cryopreservation of the whole ovary outside of the body, while a woman undergoes cancer treatments, may help preserving fertility and regaining hormone balance during recovery. One of the key challenges in whole ovary cryopreservation is adequately loading the organ with cryoprotective agents (CPAs). Another notable challenge in developing the application is the lack of geometric data needed for designing matching thermal protocols.

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Article Synopsis
  • Current epilepsy treatment often relies on trial-and-error with anti-seizure medications (ASMs), which can delay finding the best treatment for patients.
  • Machine learning (ML) is emerging as a helpful tool to predict how well patients will respond to ASMs based on various data inputs like clinical history and genetic information.
  • Although 37 studies show mixed results with some ML models performing excellently, more research is needed to enhance these models and make them practical for use in clinical settings.
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How to build the virtual cell with artificial intelligence: Priorities and opportunities.

Cell

December 2024

Chan Zuckerberg Initiative, Redwood City, CA, USA; Department of Bioengineering, Stanford University, Stanford, CA, USA; Department of Applied Physics, Stanford University, Stanford, CA, USA. Electronic address:

Article Synopsis
  • Cells are crucial for studying health and diseases, but traditional models are limited in their ability to accurately represent cell function and behavior.
  • Advances in AI and omics technology enable the development of AI virtual cells (AIVCs), complex models that simulate molecular, cellular, and tissue behavior across various conditions.
  • The creation of AIVCs aims to enhance biological research by allowing detailed simulations, speeding up discoveries, and promoting collaborative and interdisciplinary approaches in open scientific research.
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Nanoscale Ferroelectric Programming of van der Waals Heterostructures.

Nano Lett

December 2024

Department of Physics and Astronomy, University of Pittsburgh, Pittsburgh, Pennsylvania 15260, United States.

We demonstrate an approach to creating nanoscale potentials in van der Waals layers integrated with a buried programmable ferroelectric layer. Using ultra-low-voltage electron beam lithography (ULV-EBL), we can program the ferroelectric polarization in AlBN (AlBN) thin films, generating structures with sizes as small as 35 nm. We demonstrate the ferroelectric field effect with a graphene/vdW stack on AlBN by creating a p-n junction.

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Multimodal late fusion is a well-performing fusion method that sums the outputs of separately processed modalities, so-called modality contributions, to create a prediction; for example, summing contributions from vision, acoustic, and language to predict affective states. In this paper, our primary goal is to improve the interpretability of what modalities contribute to the prediction in late fusion models. More specifically, we want to factorize modality contributions into what is consistently shared by at least two modalities (pairwise redundant contributions) and what the remaining modality-specific contributions are (unique contributions).

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Article Synopsis
  • * The research hypothesizes that reduced spectral resolution—common in both electric (CI) and acoustic hearing losses—impairs the brain's ability to segregate sounds effectively by decreasing frequency resolution.
  • * A computational model supports the idea that this reduction in frequency resolution leads to poorer speech intelligibility in noise and suggests that as damage to outer hair cells increases, the ability to process temporal coherence diminishes further.
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Article Synopsis
  • The CMS experiment conducted a search for charge-parity violation in decays using proton-proton collision data from 2018, analyzing around 10 billion events with b hadrons decaying into charm hadrons.
  • The flavor of the neutral D meson was determined through the charge of pions in the reconstructed decays, and an asymmetry measurement in the decays was reported, taking into account various uncertainties.
  • This research marks the first asymmetry measurement by the CMS in the charm sector and the first to use a fully hadronic final state in such analyses.
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Test of independence is of fundamental importance in modern data analysis, with broad applications in variable selection, graphical models, and causal inference. When the data is high dimensional and the potential dependence signal is sparse, independence testing becomes very challenging without distributional or structural assumptions. In this paper, we propose a general framework for independence testing by first fitting a classifier that distinguishes the joint and product distributions, and then testing the significance of the fitted classifier.

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The projected sensitivity of the effective electron neutrino-mass measurement with the KATRIN experiment is below 0.3 eV (90 % CL) after 5 years of data acquisition. The sensitivity is affected by the increased rate of the background electrons from KATRIN's main spectrometer.

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Response and roles of algal organic matter under copper stress: Spectral and mass spectrometry analysis.

Sci Total Environ

January 2025

Department of Environmental Science & Engineering, Fudan University, Shanghai 200438, PR China; Shanghai Institute of Pollution Control and Ecological Security, Shanghai 200092, PR China. Electronic address:

Eutrophication leads to various environmental issues, including pollution caused by the production of algal organic matter (AOM). Algae typically respond to environmental changes (e.g.

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Tactile feedback from brain-controlled bionic hands can be partially restored via intracortical microstimulation (ICMS) of the primary somatosensory cortex. In ICMS, the location of percepts depends on the electrode's location and the percept intensity depends on the stimulation frequency and amplitude. Sensors on a bionic hand can thus be linked to somatotopically appropriate electrodes, and the contact force of each sensor can be used to determine the amplitude of a stimulus.

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Toward automated detection of microbleeds with anatomical scale localization using deep learning.

Med Image Anal

November 2024

Department of Electrical and Electronic Engineering, College of Engineering, Yonsei University, Seoul, Republic of Korea. Electronic address:

Cerebral Microbleeds (CMBs) are chronic deposits of small blood products in the brain tissues, which have explicit relation to various cerebrovascular diseases depending on their anatomical location, including cognitive decline, intracerebral hemorrhage, and cerebral infarction. However, manual detection of CMBs is a time consuming and error-prone process because of their sparse and tiny structural properties. The detection of CMBs is commonly affected by the presence of many CMB mimics that cause a high false-positive rate (FPR), such as calcifications and pial vessels.

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Missing data arise in most applied settings and are ubiquitous in electronic health records (EHR). When data are missing not at random (MNAR) with respect to measured covariates, sensitivity analyses are often considered. These solutions, however, are often unsatisfying in that they are not guaranteed to yield actionable conclusions.

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Article Synopsis
  • Low and middle-income countries face healthcare challenges due to limited resources, which could potentially be alleviated through telemedicine strategies.
  • A study in Istanbul analyzes the impact of telemedicine on patient travel, calculating the distance and time patients travel to receive care at cardiovascular clinics.
  • Implementing telemedicine could save significant travel distances, reduce carbon footprints by about 30%, and prevent substantial wage losses, ultimately improving access and reducing the burden on patients.
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The trifluoromethyl (-CF) group represents a highly prevalent functionality in pharmaceuticals. Over the past few decades, significant advances have been made in the development of synthetic methods for trifluoromethylation. In contrast, there are currently no metalloenzymes known to catalyze the formation of C(sp)-CF bonds.

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Norovirus is a leading cause of gastroenteritis worldwide. The factors required for the life cycle and pathogenesis of norovirus in humans remain unclear. Mouse models of norovirus infection have been widely used to explore the crosstalk between norovirus and the host.

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