In vitro studies of the metabolism of [14C]- n-alkanes using ruminal fluid of sheep as substrate.

Whether the rumen microbes are able to synthesize and/or degrade long-chain alkanes in anaerobic conditions remains a question to be answered before these hydrocarbons can be confidently used as duodenal flow or rumen transit markers. In this context, an experiment in vitro was carried out to establish whether within a rumen liquor fermentation system, n-alkanes can be derived from de-waxed structures of the plant or from non-alkane wax components (long-chain fatty alcohols, long-chain fatty acids and esters), or may be metabolized by bacteria to other components or to shorter-chain hydrocarbons. Ryegrass was labelled with 14C in growth chambers under controlled conditions in order to use it as a substrate.

Distribution of aquatic macrophytes in contrasting river systems: a critique of compositional-based assessment of water quality.

A brief summary of the historical developments relating to plant distribution and aquatic macrophyte-nutrient indices provided a means of assessing the general context and validity of previous assumptions. This has particular current relevance because of the prominent use of bioindicators for defining nutrient enrichment. A survey of 161 sites distributed across two broadly contrasting groups of rivers (circum-neutral versus alkaline) recorded 110 species of aquatic macrophytes and these have been statistically analyzed to (i) rank and separate the individual effects of local environmental conditions and spatial isolation on species distribution in the two contrasting groups of sites; (ii) calculate a macrophyte index based on plant cover and species indicator values (Mean Trophic Rank, MTR); and finally (iii) investigate the implications for biomonitoring.

Testing seasonal and long-term controls of streamwater DOC using empirical and process-based models.

Concentrations of dissolved organic carbon (DOC) in surface waters are increasing across Europe and parts of North America. Several mechanisms have been proposed to explain these increases including reductions in acid deposition, change in frequency of winter storms and changes in temperature and precipitation patterns. We used two modelling approaches to identify the mechanisms responsible for changing surface water DOC concentrations.

Determination of Cd and Zn by isotope dilution-thermal ionisation mass spectrometry using a sequential analysis procedure.

Isotope dilution-thermal ionisation mass spectrometry (ID-TIMS) was used to examine the certified Cd and Zn content of 4 Certified Reference Materials (CRMs); 2 soils: GBW07401 and GBW07405, 1 plant CRM060 and an animal tissue SRM1566a. The CRMs were chosen to be of contrasting origin and Cd:Zn content. Three digestion procedures were compared: (i) an open tube aqua regia procedure (ii) microwave digestion using Teflon bombs and (iii) hydrofluoric acid (HF) digestion using PTFE bombs.

Interactions of land use and dynamic river conditions on sorption equilibria between benthic sediments and river soluble reactive phosphorus concentrations.

Within-river cycling of P is a crucial link between catchment pollution sources and the resulting ecological impacts and integrates the biogeochemistry and hydrodynamics of river systems. This study investigates benthic sediment P sorption in relation to river soluble reactive phosphorus (SRP) concentrations during high- to low-flow changes in a major mixed land use river system in NE Scotland. We hypothesised that sediments comprised P sinks during moderate to higher flows but became P saturated with loss of buffering function during prolonged baseflow.

Grassland-herbivore interactions: how do grazers coexist?

We develop a new approach to modeling grazing systems that links foraging characteristics (intake and digestive constraints) with resource dynamics via the probability of encounter with different grass heights. Three complementary models are presented: the generation of a grass height structure through selective grazing; investigating the conditions for consumer coexistence; and, using a simplified resource structure, the consequences for consumer abundance. The main finding is that coexistence between grazers differing in body size is possible if a single-resource type becomes differentiated in its height structure.

The impact of defoliation on nitrogen translocation patterns in the woody invasive plant, Buddleia davidii.

The influence of defoliation on nitrogen (N) re-translocation and the source for N remobilisation by the invasive shrub, Buddleia davidii Franch. (buddleia) was determined. Eighty plants were grown over two growing seasons, and half were repeatedly defoliated by removing 66% of their leaf area.

Endocrine disruptors and other food-contaminating environmental pollutants as risk factors in animal reproduction.

Pollutants of many chemical classes, derived primarily from anthropogenic activities, are ubiquitous in the environment, persistent, biologically available and can exert adverse effects on the reproductive and other, indirectly related, physiological systems. Food is generally considered to be the major route of animal exposure in vertebrate species but the relative contributions of other routes of exposure such as through lungs, gills or skin are not well studied and may be of importance for certain animal groups, depending on their immediate environment. Animals are particularly sensitive to exposure during developmental stages but the pattern of exposure to chemicals is likely to be different to that of adults.

Seasonal variability of dry matter content and its relationship with shoot growth and nonstructural carbohydrates.

This study assesses how different phases of shoot growth underlie seasonal change in leaf and stem dry matter content (LDMC and SDMC, respectively) of 12 woody Mediterranean species. The relationship between LDMC and nonstructural carbohydrate (NSC) concentrations is also explored and the seasonal vs interspecies variability of LDMC compared. LDMC, SDMC and shoot elongation rate (SER) were measured on a monthly basis for a minimum of 12 months.

Multiple profiling of soil microbial communities identifies potential genetic markers of metal-enriched sewage sludge.

The long-term impacts of Cu- and Zn-rich sewage sludge additions on the structure of the microbial community in a field under pasture were investigated using a combination of multiplex-terminal restriction fragment length polymorphism (M-TRFLP) and T-RFLP profiling approaches. Changes in the community structure of bacteria, fungi, archaea and actinobacteria were observed in soils that had previously received Cu- (50-200 mg kg(-1) soil) and Zn- (150-450 mg kg(-1) soil) rich sewage sludge additions. Changes in the structure of all microbial groups measured were observed at Cu and Zn rates below the current EU guidelines (135 mg kg(-1) Cu and 300 mg kg(-1) Zn).

A PCR-based method for detecting the mycelia of stipitate hydnoid fungi in soil.

To reduce the reliance on sporocarp records for conservation efforts, information on the below-ground distribution of specific fungal species, such as stipitate hydnoid fungi, is required. Species-specific primers were developed within the internal transcribed spacer (ITS1 and ITS2) regions for 12 hydnoid fungal species including Bankera fuligineoalba, Hydnellum aurantiacum, H. caeruleum, H.

Measuring the 13C content of soil-respired CO2 using a novel open chamber system.

Carbon dioxide respired by soils comes from both autotrophic and heterotrophic respiration. 13C has proved useful in differentiating between these two sources, but requires the collection and analysis of CO2 efflux from the soil. We have developed a novel, open chamber system which allows for the accurate and precise quantification of the delta13C of soil-respired CO2.

Does the preferential microbial colonisation of ferromagnesian minerals affect mineral weathering in soil?

Fungal activity is thought to play a direct and effective role in the breakdown and dissolution of primary minerals and in the synthesis of clay minerals in soil environments, with important consequences for plant growth and ecosystem functioning. We have studied primary mineral weathering in volcanic soils developed on trachydacite in southern Tuscany using a combination of qualitative and quantitative mineralogical and microbiological techniques. Specifically, we characterized the weathering and microbiological colonization of the magnetically separated ferromagnesian minerals (biotite and orthopyroxene) and non-ferromagnesian constituents (K-feldspar and volcanic glass) of the coarse sand fraction (250-1,000 microm).

Environmental heterogeneity generates fluctuating selection on a secondary sexual trait.

In any population in which resources are limiting, the allocation of resources toward increased reproductive success may generate costs to survival [1-8]. The relationship between a sexually selected trait and fitness will therefore represent a balance between its relative associations with fecundity versus viability [3, 6, 7]. Because the risk of mortality in a population is likely to be heavily determined by ecological conditions, survival costs may vary as a function of the prevailing environment [7].

Does the Jarman-Bell principle at intra-specific level explain sexual segregation in polygynous ungulates? Sex differences in forage digestibility in Soay sheep.

The Jarman-Bell principle states that large-bodied mammalian herbivores can subsist on lower quality diets because of their lower metabolism requirement/gut capacity ratio. Two major hypotheses for sexual segregation (the behaviour in which animals of the same species aggregate by sex) base their foundations on extending this principle to the intraspecific level, despite the lack of experimental evidence to support this. The first proposes that the larger males can process fibre (low-quality diet) more efficiently than the smaller females, leading to sexual segregation by habitat partitioning due to selection of different food quality and/or quantity (sexual dimorphism-body size hypothesis).

Microbial DNA profiling by multiplex terminal restriction fragment length polymorphism for forensic comparison of soil and the influence of sample condition.

Aims: To evaluate: (i) the impact of air-drying on bacterial, archaeal and fungal soil DNA profiles and (ii) the potential use of multiplex-terminal restriction fragment length polymorphism (M-TRFLP) as a tool for forensic comparison of soil.

Methods And Results: An M-TRFLP approach was used to profile bacterial, archaeal and fungal DNA profiles from five different soil sites. Air-drying soil significantly reduced the quantity of DNA but the number of operational taxanomic units (OTU) was unaffected.

Diversity of predominant endophytic bacteria in European deciduous and coniferous trees.

The diversity of endophytic bacteria residing in root, stem, and leaf tissues was examined in coniferous and deciduous tree species, Scots pine (Pinus sylvestris L.), silver birch (Betula pendula Roth), and rowan (Sorbus aucuparia L.).

Is breeding of farmland wading birds depressed by a combination of predator abundance and grazing?

Agri-environment schemes have been implemented across Europe to counter biodiversity loss in agricultural landscapes and halt the continual decline of farmland birds, including waders. Such schemes provide financial compensation for changes in agricultural practice, including livestock grazing regimes. Scheme uptake has been variable, partly because farmers believe that other factors, notably predation, are key to wader population declines.

Determination of N-species in soil extracts using microplate techniques.

Colourimetric methods for the determination of NO(3)(-), NH(4)(+) and total N in water extracts of soils using 96-well microplate techniques are described. Nitrate was determined by azo dye formation after reduction to NO(2)(-) using a solution of hydrazine sulphate. Ammonium in the soil extracts was purified and concentrated by diffusion as NH(3) from small volumes (750microL) of extract treated with MgO into a H(2)SO(4) collector using a double-plate, MicroResp method and subsequently determined by the Berthelot reaction.

Bacteria associated with ectomycorrhizas of slash pine (Pinus elliottii) in south-eastern Queensland, Australia.

Bacterial communities associated with ectomycorrhizal and uncolonized roots of Pinus elliottii (slash pine) collected from a plantation in south-east Queensland, Australia, were investigated, using cultivation-dependent and -independent methods. Denaturing gradient gel electrophoresis (DGGE) analysis of 16S rRNA gene PCR products obtained using a cultivation-independent approach revealed that bacterial communities associated with ectomycorrhizal root tips differed significantly from those associated with roots uncolonized by ectomycorrhizal fungi. DGGE analysis of cultivable bacterial communities revealed no significant difference between ectomycorrhizal and uncolonized roots.

Whole-stream phosphorus cycling: testing methods to assess the effect of saturation of sorption capacity on nutrient uptake length measurements.

The cycling rate of nutrients such as phosphorus (P) is a fundamental parameter in stream ecology. In whole-stream ecosystem experiments, cycling rates are often assessed using continuous short-term nutrient addition studies. While several simplifying assumptions are generally recognised, these are rarely, if ever, fully tested under field conditions.

Interactive effects of nitrogen deposition and fire on plant and soil chemistry in an alpine heathland.

The response of alpine heathland vegetation and soil chemistry to N additions of 0, 10, 20 and 50 kg N ha(-1) year(-1) in combination with simulated accidental fire (+/-) was monitored over a 5-year period. N addition caused rapid and significant increases in plant tissue N content and N:P and N:K of Calluna vulgaris, suggesting increasing phosphorus and potassium limitation of growth. Soil C:N declined significantly with N addition, indicating N saturation and increasing likelihood of N leakage.

Understanding clustering in type space using field theoretic techniques.

The birth/death process with mutation describes the evolution of a population, and displays rich dynamics including clustering and fluctuations. We discuss an analytical 'field-theoretical' approach to the birth/death process, using a simple dimensional analysis argument to describe evolution as a 'super-Brownian motion' in the infinite population limit. The field theory technique provides corrections to this for large but finite population, and an exact description at arbitrary population size.

Fear in grasslands: the effect of Eurasian kestrels on skylark abundances.

Predation has received considerable theoretical and empirical support in population regulation. The effect of predators, however, could be achieved in direct (killing) or indirect effects (such as displacement). In this paper, we explored the relationship between Eurasian kestrels Falco tinnunculus and skylarks Alauda arvensis in Mediterranean grasslands.

Is there a future for sequential chemical extraction?

Since their introduction in the late 1970s, sequential extraction procedures have experienced a rapid increase in use. They are now applied for a large number of potentially toxic elements in a wide range of sample types. This review uses evidence from the literature to consider the usefulness and limitations of sequential extraction and thereby to assess its future role in environmental chemical analysis.