21,504 results match your criteria: "MA 02139; pblainey@broadinstitute.org.[Affiliation]"

RNA medicines have become a promising platform for therapeutic use in recent years. Understanding the immunomodulatory effects of novel mRNA-lipid nanoparticles (LNPs) is crucial for future therapeutic development. An in vitro whole blood assay was developed to assess the impact of mRNA-LNPs on immune cell function, cytokine release, and complement activation.

View Article and Find Full Text PDF

Advanced dielectrics for 2D devices.

Sci Bull (Beijing)

December 2024

CAS Key Laboratory of Design and Assembly of Functional Nanostructures, and Fujian Provincial Key Laboratory of Materials and Techniques toward Hydrogen Energy, Fujian Institute of Research on the Structure of Matter, Chinese Academy of Sciences, Fuzhou 350002, China. Electronic address:

View Article and Find Full Text PDF

Radiative corrections are crucial for modern high-precision physics experiments, and are an area of active research in the experimental and theoretical community. Here we provide an overview of the state of the field of radiative corrections with a focus on several topics: lepton-proton scattering, QED corrections in deep-inelastic scattering, and in radiative light-hadron decays. Particular emphasis is placed on the two-photon exchange, believed to be responsible for the proton form-factor discrepancy, and associated Monte-Carlo codes.

View Article and Find Full Text PDF

Altering Bacille Calmette-Guérin (BCG) immunization from low-dose intradermal (i.d.) to high-dose intravenous (i.

View Article and Find Full Text PDF

CH-π interactions between carbohydrates and aromatic amino acids play an essential role in biological systems that span all domains of life. Quantifying the strength and importance of these CH-π interactions is challenging because these interactions involve several atoms and can exist in many distinct orientations. To identify an orientational landscape of CH-π interactions, we constructed a dataset of close contacts formed between β-d-galactose residues and the aromatic amino acids, tryptophan, tyrosine, and phenylalanine, across crystallographic structures deposited in the Protein Data Bank.

View Article and Find Full Text PDF
Article Synopsis
  • * Yeast cells exhibit a wider size range compared to mammalian cells, which makes it challenging to accurately determine single-cell gates during FACS.
  • * The report investigates different gating options for yeast display and proposes an optimized flow cytometry method to enhance the selection of single yeast cells, leading to improved results in yeast display studies.
View Article and Find Full Text PDF

Delivering medical agents to diseased tissues has been challenging, leading researchers to study the in vivo transport process in the body for improving delivery. Many imaging techniques exist for mapping the distribution of medical agent-carrying nanoparticles in tissues, but they cannot capture the three-dimensional context of tissues with single nanoparticle resolution. Here, we developed 3DEM-NPD, a three-dimensional electron microscopy (3D EM) machine learning strategy to image and map single nanoparticle distributions (NPD) in tissues.

View Article and Find Full Text PDF

Aortic stenosis (AS) is the most common valvular heart disease in developed countries. High-fidelity preclinical models can improve AS management by enabling therapeutic innovation, early diagnosis, and tailored treatment planning. However, their use is currently limited by complex workflows necessitating lengthy expert-driven manual operations.

View Article and Find Full Text PDF

Assessment of fine-tuned large language models for real-world chemistry and material science applications.

Chem Sci

January 2025

Laboratory of Molecular Simulation (LSMO), Institut des Sciences et Ingénierie Chimiques, École Polytechnique Fédérale de Lausanne (EPFL) Rue de l'Industrie 17 CH-1951 Sion Switzerland

Article Synopsis
  • Large language models (LLMs) like GPT-J-6B, Llama-3.1-8B, and Mistral-7B can learn chemical properties effectively through fine-tuning without specialized features.
  • Fine-tuning these models often outperforms traditional machine learning methods in simple classification tasks, with potential success in more complex problems depending on dataset size and question type.
  • The ease of converting datasets for LLM training and the effectiveness of small datasets in generating predictive models suggest that LLMs could significantly streamline experimental processes in chemical research.
View Article and Find Full Text PDF

Deep and dynamic metabolic and structural imaging in living tissues.

Sci Adv

December 2024

Research Laboratory of Electronics, MIT, Cambridge, MA 02139, USA.

Label-free imaging through two-photon autofluorescence of NAD(P)H allows for nondestructive, high-resolution visualization of cellular activities in living systems. However, its application to thick tissues has been restricted by its limited penetration depth within 300 μm, largely due to light scattering. Here, we demonstrate that the imaging depth for NAD(P)H can be extended to more than 700 μm in living engineered human multicellular microtissues by adopting multimode fiber-based, low repetition rate, high peak power, three-photon excitation of NAD(P)H at 1100 nm.

View Article and Find Full Text PDF
Article Synopsis
  • - A survey of aging researchers revealed significant disagreement on key questions about aging, such as its definition, causes, onset, and rejuvenation, indicating a lack of consensus in the field.
  • - Researchers have varying interpretations of what constitutes "aging," leading to different experimental approaches and priorities, which complicates the understanding and study of the aging process.
  • - The findings highlight the necessity for clearer definitions and targeted goals within aging research, as well as strategies to address ongoing disagreements, in hopes of advancing the field.
View Article and Find Full Text PDF
Article Synopsis
  • The study examines how a certain type of microbe, when exposed to periods of darkness, can develop tolerance through co-cultivation with a heterotrophic microbe.
  • Results show that the dark-tolerant microbes became larger, had less chlorophyll, and shifted from photosynthesis to respiration, while the heterotroph adapted by using more organic acids instead of sugars.
  • The research highlights the enhanced metabolic exchange between the two microbes, indicating a strong coupling that helps them survive in low-light conditions.
View Article and Find Full Text PDF

With the onset of the COVID-19 pandemic 4 years ago, viral sequencing continues to document numerous individual mutations in the viral spike protein across many variants. To determine the ability of vaccine-mediated humoral immunity to combat continued SARS-CoV-2 evolution, we construct a comprehensive panel of pseudoviruses harboring each individual mutation spanning 4 years of the pandemic to understand the fitness cost and resistance benefits of each. These efforts identify numerous mutations that escape from vaccine-induced humoral immunity.

View Article and Find Full Text PDF

Modeling protein motions through reinforcement learning.

Proc Natl Acad Sci U S A

December 2024

Laboratory for Atomistic and Molecular Mechanics, Department of Civil and Environmental Engineering, Massachusetts Institute of Technology, Cambridge, MA 02139.

View Article and Find Full Text PDF

Intracortical recordings reveal the neuronal selectivity for bodies and body parts in the human visual cortex.

Proc Natl Acad Sci U S A

December 2024

Research group Experimental Neurosurgery and Neuroanatomy, Katholieke Universiteit Leuven, and the Leuven Brain Institute, Leuven B-3000, Belgium.

Body perception plays a fundamental role in social cognition. Yet, the neural mechanisms underlying this process in humans remain elusive given the spatiotemporal constraints of functional imaging. Here, we present intracortical recordings of single- and multiunit spiking activity in two epilepsy surgery patients in or near the extrastriate body area, a critical region for body perception.

View Article and Find Full Text PDF

Cargo Quantification of Functionalized DNA Origami for Therapeutic Application.

Small Methods

December 2024

Department of Cancer Biology, Dana-Farber Cancer Institute, Harvard Medical School, Boston, MA, 02115, USA.

In recent years, notable advances in nanotechnology-based drug delivery have emerged. A particularly promising platform in this field is DNA origami-based nanoparticles, which offer highly programmable surfaces, providing precise control over the nanoscale spacing and stoichiometry of various cargo. These versatile particles are finding diverse applications ranging from basic molecular biology to diagnostics and therapeutics.

View Article and Find Full Text PDF

Cognition is an emergent property.

Curr Opin Behav Sci

June 2024

The Picower Institute for Learning & Memory and Department of Brain and Cognitive Sciences, Massachusetts Institute of Technology, Cambridge, MA 02139, USA.

Cognition relies on the flexible organization of neural activity. In this discussion, we explore how many aspects of this organization can be described as emergent properties, not reducible to their constituent parts. We discuss how electrical fields in the brain can serve as a medium for propagating activity nearly instantaneously, and how population-level patterns of neural activity can organize computations through subspace coding.

View Article and Find Full Text PDF

All cultivated Patescibacteria, or CPR, exist as obligate episymbionts on other microbes. Despite being ubiquitous in mammals and environmentally, molecular mechanisms of host identification and binding amongst ultrasmall bacterial episymbionts are largely unknown. Type 4 pili (T4P) are well conserved in this group and predicted to facilitate symbiotic interactions.

View Article and Find Full Text PDF

The projected sensitivity of the effective electron neutrino-mass measurement with the KATRIN experiment is below 0.3 eV (90 % CL) after 5 years of data acquisition. The sensitivity is affected by the increased rate of the background electrons from KATRIN's main spectrometer.

View Article and Find Full Text PDF

Introduction: Digital voice analysis is gaining traction as a tool to differentiate cognitively normal from impaired individuals. However, voice data poses privacy risks due to the potential identification of speakers by automated systems.

Methods: We developed a framework that uses weighted linear interpolation of privacy and utility metrics to balance speaker obfuscation and cognitive integrity in cognitive assessments.

View Article and Find Full Text PDF

For the past couple of centuries, much of tiger beetle taxonomic work has been focused on explaining intraspecific variation. In the Northern Hemisphere, over a thousand subspecies have been described and many have since been relegated to synonymy. Generally, the phenotypic-based subspecies circumscription has been purely descriptive.

View Article and Find Full Text PDF

BCL11A +58/+55 enhancer-editing facilitates HSPC engraftment and HbF induction in rhesus macaques conditioned with a CD45 antibody-drug conjugate.

Cell Stem Cell

December 2024

National Heart, Lung, and Blood Institute (NHLBI)/National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK), National Institutes of Health (NIH), Bethesda, MD 20814, USA. Electronic address:

Editing the +58 region of the BCL11A erythroid enhancer has shown promise in treating β-globin disorders. To address variations in fetal hemoglobin (HbF) response, we investigated editing both +58 and +55 enhancers. Rhesus macaques transplanted with edited hematopoietic stem/progenitor cells (HSPCs) following busulfan conditioning exhibited durable, high-level (∼90%) editing frequencies post transplantation with sustained HbF reactivation over 4 years, without hematological perturbations.

View Article and Find Full Text PDF

Ecosystem stability relies on diversity difference between trophic levels.

Proc Natl Acad Sci U S A

December 2024

Physics of Living Systems, Department of Physics, Massachusetts Institute of Technology, Cambridge, MA 02139.

The stability of ecological communities has a profound impact on humans, ranging from individual health influenced by the microbiome to ecosystem services provided by fisheries. A long-standing goal of ecology is the elucidation of the interplay between biodiversity and ecosystem stability, with some ecologists warning of instability due to loss of species diversity while others arguing that greater diversity will instead lead to instability. Here, by considering a minimal two-level ecosystem with multiple predator and prey species, we show that stability does not depend on absolute diversity but rather on diversity differences between levels.

View Article and Find Full Text PDF