223 results match your criteria: "Lincoln Research Centre[Affiliation]"

Pseudomonas syringae pv. actinidiae biovar 3 (Psa3) has decimated kiwifruit orchards growing susceptible kiwifruit Actinidia chinensis varieties. Effector loss has occurred recently in Psa3 isolates from resistant kiwifruit germplasm, resulting in strains capable of partially overcoming resistance present in kiwiberry vines (Actinidia arguta, Actinidia polygama, and Actinidia melanandra).

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Background: Bacterial genomes often encode structures similar to phage capsids (encapsulins) and phage tails which can be induced spontaneously or using genotoxic compounds such as mitomycin C. These high molecular-weight (HMW) putative antibacterial proteins (ABPs) are used against the competitive strains under natural environment. Previously, it was unknown whether these HMW putative ABPs originating from the insect pathogenic Gram-positive, spore-forming bacterium Brevibacillus laterosporus (Bl) isolates (1821L, 1951) are spontaneously induced during the growth and pose a detrimental effect on their own survival.

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The design of a readily useable technology for routine paddock-scale soil porosity estimation is described. The method is non-contact (proximal) and typically from "on-the-go" sensors mounted on a small farm vehicle around 1 m above the soil surface. This ultrasonic sensing method is unique in providing estimates of porosity by a non-invasive, cost-effective, and relatively simple method.

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Microsclerotia (MS) are considered one of the most promising propagules for use as active ingredients in biopesticides due to their tolerance to abiotic factors and ability to produce infective conidia for the control of pests. Therefore, the objective of this research was to establish the conditions required to induce the formation of microsclerotia in Metarhizium robertsii Mt004 and to study its development process, tolerance to abiotic factors and insecticidal activity of MS-derived conidia. M.

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Article Synopsis
  • Bacterial ABC toxin complexes consist of three main proteins: TcA, TcB, and TcC, which work together to deliver a toxic "cargo" to target cells; TcA binds and penetrates the cell membrane, while TcB and TcC form a shell around the cargo.
  • A new TcC protein structure from Yersinia entomophaga was identified, revealing that inside the TcB-TcC shell, the toxin adopts a disordered state but has areas of local order thanks to the shell's surface.
  • When outside the shell, the toxin has a structure similar to the SpvB toxin from Salmonella, suggesting it modifies actin to inhibit its normal function in cell processes.
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Stepwise assembly and release of Tc toxins from Yersinia entomophaga.

Nat Microbiol

February 2024

Department of Biology, Institute of Molecular Biology and Biophysics, Eidgenössische Technische Hochschule Zürich, Zürich, Switzerland.

Tc toxins are virulence factors of bacterial pathogens. Although their structure and intoxication mechanism are well understood, it remains elusive where this large macromolecular complex is assembled and how it is released. Here we show by an integrative multiscale imaging approach that Yersinia entomophaga Tc (YenTc) toxin components are expressed only in a subpopulation of cells that are 'primed' with several other potential virulence factors, including filaments of the protease M66/StcE.

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Genotype-phenotype associations between the bovine genome and grazing behaviours measured over time and across contexts have been reported in the past decade, with these suggesting the potential for genetic control over grazing personalities in beef cattle. From the large array of metrics used to describe grazing personality behaviours (GP-behaviours), it is still unclear which ones are linked to specific genes. Our prior observational study has reported associations and trends towards associations between genotypes of the glutamate metabotropic receptor 5 gene (GRM5) and four GP-behaviours, yet the unbalanced representation of GRM5 genotypes occurring in observational studies may have limited the ability to detect associations.

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Parasitism with gastrointestinal nematodes (GIN) is a worldwide issue impacting negatively on animal production, health, and welfare. Therefore, early diagnostic signs of parasitism are required to allow for timely interventions. The objective of this study was to evaluate the behavioural and physiological changes in lambs associated with GIN infection.

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Formation of lysinoalanine protein-protein crosslinks during food processing adversely impacts nutritional value. However, mapping lysinoalanine directly in food is challenging. We characterized the fragmentation pattern of lysinoalanine crosslinks in synthetic peptide models over a range of pH and time treatments using mass spectrometry.

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Effect of Heat Treatment on Protein Self-Digestion in Ruminants' Milk.

Foods

September 2023

Riddet Institute, Te Ohu Rangahau Kai Facility, Massey University, Palmerston North 4474, New Zealand.

This study investigated whether heat treatments (raw, 63 °C for 30 min, and 85 °C for 5 min) affect protein hydrolysis by endogenous enzymes in the milk of ruminants (bovine, ovine, and caprine) using a self-digestion model. Self-digestion consisted of the incubation for six hours at 37 °C of the ruminants' milk. Free amino group concentration was measured by the -phthaldialdehyde method, and peptide sequences were identified by chromatography-mass spectrometry.

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Effects of environmental and housing system factors on ammonia and greenhouse gas emissions from cattle barns: A meta-analysis of a global data collation.

Waste Manag

December 2023

Leibniz Institute for Agricultural Engineering and Bioeconomy (ATB), Max-Eyth-Allee 100, 14469 Potsdam, Germany; University of Zielona Góra, Faculty of Civil Engineering, Architecture and Environmental Engineering, 65-417 Zielona Góra, Poland.

This study provides a meta-analysis on the relationships between cattle barn CH, NH and NO emission rates and their key drivers (i.e., housing type, floor type, environmental conditions).

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The various grass-induced epichloëcyclins of the spp. are ribosomally synthesized and post-translationally modified peptides (RiPPs), produced as small, secreted cyclopeptides from a single gene, Here, four clustered and coregulated genes (, , , and ) with predicted roles in epichloëcyclin production in were evaluated through gene disruption. Subsequent chemical analysis indicates that GigB is a DUF3328 domain-containing protein associated with cyclization of epichloëcyclins; GigC is a methyltransferase enzyme responsible for N-methylation of desmethylepichloëcyclins; and KexB is a subtilisin-like enzyme, partly responsible for the propeptide cleavage of epichloëcyclin intermediates.

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Responses to water stress extremes in diverse red clover germplasm accessions.

Front Plant Sci

June 2023

Faculty of Agriculture and Life Sciences, Lincoln University, Lincoln, New Zealand.

Red clover ( L.), a key perennial pastoral species used globally, can strengthen pastural mixes to withstand increasingly disruptive weather patterns from climate change. Breeding selections can be refined for this purpose by obtaining an in-depth understanding of key functional traits.

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Complete Genome Sequences of Six Isolates of the Oryctes rhinoceros Nudivirus.

Microbiol Resour Announc

August 2023

Resilient Agriculture, AgResearch Limited, Lincoln Research Centre, Christchurch, New Zealand.

Oryctes rhinoceros nudivirus, a double-stranded DNA virus of the family , is an important biocontrol agent of the coconut rhinoceros beetle (Coleoptera: Scarabaeidae). We present the genome sequences of six isolates of Oryctes rhinoceros nudivirus collected from the Philippines, Papua New Guinea, and Tanzania between the years 1977 and 2016.

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Abstract: The self-assembling and gelation properties of a bioactive peptide derived from bovine casein (FFVAPFPEVFGK) were studied in the peptide's natural form (uncapped, ) and capped with protecting groups added to both termini (capped, ). Although the natural peptide () did not demonstrate self-assembly, the capped peptide () spontaneously self-assembled and formed a self-supporting gel. Variations in peptide concentration and incubation time influenced the gel's mechanical properties, suggesting the peptide's properties could be tuned and exploited for different applications.

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Many pastoral farmers are searching for ways to lower the carbon emission footprint that is generated by livestock. Planting trees on the farm is currently a popular option for farmers to offset their emissions yet requires knowledge of suitable tree species and locations to plant them. This paper describes a decision-support tool aimed at helping farmers to create and visualise different planting designs while balancing the objectives of sequestering carbon and maintaining farm profitability.

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Physical traits that improve welfare and disease outcomes for sheep are becoming increasingly important due to both increased climate challenges and societal expectations. Such traits include tail length, the amount of skin (vs. wool) on the underside of the tail, and the area of no-wool (hair) on the belly and breech areas (surrounding the anus) of the animal.

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Linocin M18 protein from the insect pathogenic bacterium Brevibacillus laterosporus isolates.

Appl Microbiol Biotechnol

July 2023

Protein Science and Engineering, Callaghan Innovation, Christchurch, New Zealand.

Brevibacillus laterosporus (Bl) is a Gram-positive and spore-forming bacterium. Insect pathogenic strains have been characterised in New Zealand, and two isolates, Bl 1821L and Bl 1951, are under development for use in biopesticides. However, growth in culture is sometimes disrupted, affecting mass production.

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Influence of key factors on ammonia and nitrous oxide emission factors for excreta deposited by livestock and land-applied manure.

Sci Total Environ

September 2023

Leibniz-Institut für Agrartechnik und Bioökonomie (ATB), Max-Eyth-Allee 100, Potsdam D-14469, Germany; Faculty of Civil Engineering, Architecture and Environmental Engineering, University of Zielona Góra, Poland.

Ammonia (NH) and nitrous oxide (NO) emissions from livestock manure management have a significant impact on air quality and climate change. There is an increasing urgency to improve our understanding of drivers influencing these emissions. We analysed the DATAMAN ("DATAbase for MANaging greenhouse gas and ammonia emissions factors") database to identify key factors influencing (i) NH emission factors (EFs) for cattle and swine manure applied to land and (ii) NO EFs for cattle and swine manure applied to land, and (iii) cattle urine, dung and sheep urine deposited during grazing.

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Secretion of exoproteins is a key component of bacterial virulence, and is tightly regulated in response to environmental stimuli and host-dependent signals. The entomopathogenic bacterium Yersinia entomophaga MH96 produces a wide range of exoproteins including its main virulence factor, the 2.46 MDa insecticidal Yen-Tc toxin complex.

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This research paper aimed to locate protein modifications caused by treatment of milk and determine if the modification locations were consistent. The majority of milk for consumption is homogenised using pressure and heat, and this causes changes in the location of proteins in the milk as well as protein modifications. To investigate these proteomic changes, raw milk was pasteurised (72°C, 15 s), then, to separate the treatment for homogenisation, heated at these different pressures and temperatures: 45°C without no pressure applied, 45°C with 35 MPa, 80°C without pressure applied and 80°C, with 35 MPa.

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The Efficacy of Biological Control for the Suppression of the Pea Aphid (Acyrthosiphon Pisum): Does the Resistance of Alfalfa Cultivars Matter?

Insects

December 2022

The First-Class Discipline of Prataculture Science of Ningxia University (No. NXYLXK2017A01), College of Agriculture, Ningxia University, Yinchuan 750021, China.

The pea aphid, Harris, is a major pest of alfalfa in northwestern China. However, the roles of different groups of natural enemies in combination with aphid-resistant cultivars in the suppression of the pea aphid have not been clarified under field conditions. In this study, we used experimental cages to better understand the top-down (natural enemies) and bottom-up (nine alfalfa cultivars) biological processes, as well as the individual roles of the two processes, in the control of the pea aphid.

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The protein dynamics of bovine and caprine β-lactoglobulin differ as a function of pH.

Food Chem

May 2023

Biomolecular Interaction Centre, School of Biological Sciences, University of Canterbury, Christchurch 8140, New Zealand; Riddet Institute, based at Massey University, Palmerston North 4442, New Zealand; Department of Biochemistry and Molecular Biology, Bio21 Molecular Science and Biotechnology Institute, University of Melbourne, Victoria 3010, Australia. Electronic address:

The properties of milk proteins differ between mammalian species. β-Lactoglobulin (βlg) proteins from caprine and bovine milk are sequentially and structurally highly similar, yet their physicochemical properties differ, particularly in response to pH. To resolve this conundrum, we compared the dynamics of both the monomeric and dimeric states for each homologue at pH 6.

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Livestock manure management systems can be significant sources of nitrous oxide (N O), methane (CH ), and ammonia (NH ) emissions. Many studies have been conducted to improve our understanding of the emission processes and to identify influential variables in order to develop mitigation techniques adapted to each manure management step (animal housing, outdoor storage, and manure spreading to land). The international project DATAMAN (http://www.

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Background: Isolates of Serratia entomophila and S. proteamaculans (Yersiniaceae) cause disease specific to the endemic New Zealand pasture pest, Costelytra giveni (Coleoptera: Scarabaeidae). Previous genomic profiling has shown that S.

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