Fast and Economic Microarray-Based Detection of Species-, Resistance-, and Virulence-Associated Genes in Clinical Strains of Vancomycin-Resistant Enterococci (VRE).

Today, there is a continuous worldwide battle against antimicrobial resistance (AMR) and that includes vancomycin-resistant enterococci (VRE). Methods that can adequately and quickly detect transmission chains in outbreaks are needed to trace and manage this problem fast and cost-effectively. In this study, DNA-microarray-based technology was developed for this purpose.

Artifacts and Anomalies in Raman Spectroscopy: A Review on Origins and Correction Procedures.

Raman spectroscopy, renowned for its unique ability to provide a molecular fingerprint, is an invaluable tool in industry and academic research. However, various constraints often hinder the measurement process, leading to artifacts and anomalies that can significantly affect spectral measurements. This review begins by thoroughly discussing the origins and impacts of these artifacts and anomalies stemming from instrumental, sampling, and sample-related factors.

New Parameter for Benchmarking Plasmonic Gas Sensors Demonstrated with Densely Packed Au Nanoparticle Layers.

Localized surface plasmon resonance (LSPR) gas sensitivity is introduced as a new parameter to evaluate the performance of plasmonic gas sensors. A model is proposed to consider the plasmonic sensors' surface sensitivity and plasmon decay length and correlate the LSPR response, measured upon gas exchange, with an equivalent refractive index change consistent with adsorbed gas layers. To demonstrate the applicability of this new parameter, ellipsoidal gold nanoparticles (NPs) arranged in densely packed hexagonal lattices were fabricated.

Characterizing temporal stability of supercontinuum generation in higher-order modes supported by liquid-core fibers.

The generation of tailored supercontinua is essential for studying ultrafast light-matter interactions and for a variety of practical applications requiring broadband light. Liquid-core fibers (LCFs) have emerged as an innovative nonlinear photonic platform, demonstrating high efficiency in nonlinear frequency conversion. In this study, we showcase that LCFs provide a stable platform for ultrafast supercontinuum generation in a selected higher-order vector mode at .

Beyond the Surface: Interconnection of Viscosity, Crystal Growth, and Diffusion in GeSe Glass-Former.

The knowledge of viscosity behavior, crystal growth phenomenon, and diffusion is important in producing, processing, and practical applications of amorphous solids prepared in different forms (bulk glasses and thin films). This work uses microscopy to study volume crystal growth in GeSe bulk glasses and thermally evaporated thin films. The collected growth data measured over a wide temperature range show a significant increase in crystal growth rates in thin films.

Combining Infrared Refraction and Attenuated Total Reflection Spectroscopy.

We have specified and obtained a ZnSe prism with an unconventional face angle cut to 30°. This prism, with internal incidence angles ranging from 30° to 48°, allows users to record internal reflection spectra below the critical angle and attenuated total reflection (ATR) spectra above the critical angle without the need to change optics or move or replace the sample. We demonstrate its capabilities using 102 spectra of benzyl benzoate taken with - and -polarization at different angles of incidence.

Multiplex electrochemical aptasensor for the simultaneous detection of linomycin and neomycin antibiotics.

The escalating use of antibiotics across diverse sectors, including human healthcare, agriculture, and livestock, has led to their pervasive presence in the environment, raising concerns about their impact on ecosystems and human health. Traditional detection methods, reliant on high-performance liquid chromatography and immuno-assays, face challenges of complexity, cross-reactivity, and limited specificity. Aptamer-based biosensors offer a promising alternative, leveraging the specificity, stability, and cost-effectiveness of aptamers.

Photocatalytic Nanocomposite Based on Titanate Nanotubes Decorated with Plasmonic Nanoparticles for Enhanced Broad-Spectrum Antibacterial Activity.

Infections resulting from microorganisms pose an ongoing global public health challenge, necessitating the constant development of novel antimicrobial approaches. Utilizing photocatalytic materials to generate reactive oxygen species (ROS) presents an appealing strategy for combating microbial threats. In alignment with this perspective, sodium titanate nanotubes were prepared by scalable hydrothermal method using TiO and NaOH.

NIR-ViS-UV broadband absorption in ultrathin electrochemically-grown, graded index nanoporous platinum films.

Nanoporous platinum broadband absorber has attracted interest in thermosensorics and IR photodetection due to its unique properties. In this work we report the physical mechanism underlying broadband absorption in electrochemically-grown, nanoporous Pt films by analyzing NIR-ViS-UV spectral ellipsometry data of nanoporous Pt films in dependence on the Pt film thickness (27, 35, 38, 48 nm). For the two thinner films a single layer model with a graded optical index Pt surface layer was used.

Raman Spectroscopy for Instant Bladder Tumor Diagnosis: System Development and In Vivo Proof-Of-Principle Study in Accordance with the European Medical Device Regulation (MDR2017/745).

This work reports on an in vivo Raman-based endoscopy system, invaScope, enabling Raman measurements of healthy and tumor bladder tissue during an endoscopic procedure in the operating theatre. The presented study outlines the progression from the initial concept (validated through previously performed ex vivo studies) to the approval and implementation of a clinical investigational device according to the requirement within the framework of the European Medical Device Regulation (MDR2017/745). The study's primary objective was to employ the invaScope Raman system within the bladder, capturing in vivo spectroscopic Raman data followed by standard histo- and cytopathological examinations of urological tissue (considered the gold standard).

Molecular characterization, virulence and antimicrobial and biocidal susceptibility of selected bacteria isolated from the cloaca of nestling ospreys (Pandion haliaetus) from Mono Lake, California, USA.

In the present study, the presence of the Enterobacterales, Staphylococcus spp., Mammaliicoccus spp., and Enterococcus spp.

Terahertz conductivity mapping of thin films on smart textiles.

Smart textiles that promise to become sensors and actuators for multiple applications are an active area of research. Conductive textiles formed by coating a fabric with a conductive film will play a key role in such applications. Here we present contactless mapping of the terahertz (THz) conductivity of thin conductive films deposited on textiles.

100 μs Luminescence Lifetime Boosts the Excited State Reactivity of a Ruthenium(II)-Anthracene Complex in Photon Upconversion and Photocatalytic Polymerizations with Red Light.

The triplet excited state lifetime of a photosensitizer is an essential parameter for diffusion-controlled energy- and electron-transfer, which occurs usually in a competitive manner to the intrinsic decay of a triplet excited state. Here we show the decisive role of luminescence lifetime in the triplet excited state reactivity toward energy- and electron transfer. Anchoring two phenyl anthracene chromophores to a ruthenium(II) polypyridyl complex (Ru ref) leads to a Ru triad with a luminescence lifetime above 100 μs, which is more than 40 times longer than that of the prototypical complex.

Evaluating the potential of vancomycin-modified magnetic beads as a tool for sample preparation in diagnostic assays.

Vancomycin-functionalized micro- or nanoparticles are frequently used for isolation and enrichment of bacteria from various samples. Theoretically, only Gram-positive organisms should adhere to the functionalized surfaces as vancomycin is an antibiotic targeting a peptidoglycan precursor in the cell wall, which in Gram-negative bacteria is shielded by the outer cell membrane. In the literature, however, it is often reported that Gram-negative bacteria also bind efficiently to the vancomycin-modified particles.

Unveiling Microbial Diversity: Raman Spectroscopy's Discrimination of and Related Genera.

In the clinical environment, the identification of phylogenetic closely related genera and species like and is challenging. Both genera contain representatives of pathogenic and nonpathogenic species that need to be distinguished for a proper diagnostic read-out. Therefore, reliable and accurate detection methods must be employed for the correct identification of these genera and species.

Special Section Guest Editorial: Exploiting Complex Media Photonics to Illuminate Brain's Hidden Depth.

The editorial introduces the Neurophotonics Special Issue "Complex Media NeuroPhotonics," highlighting featured articles.

Spectral Zones-Based SHAP/LIME: Enhancing Interpretability in Spectral Deep Learning Models Through Grouped Feature Analysis.

Interpretability is just as important as accuracy when it comes to complex models, especially in the context of deep learning models. Explainable artificial intelligence (XAI) approaches have been developed to address this problem. The literature on XAI for spectroscopy mainly emphasizes independent feature analysis with limited application of zone analysis.

Monitoring the Dilution of Buffer Solutions with Different pH Values above and below Physiological pH in Very Small Volumes.

The accurate determination of the post-dilution concentration of biological buffers is essential for retaining the necessary properties and effectiveness of the buffer to maintain stable cellular environments and optimal conditions for biochemical reactions. In this work, we introduce a silicon-based impedance chip, which offers a rapid and reagent-free approach for monitoring the buffer concentrations after dilution with deionized (DI) water. The impedance of the impedance chip is measured, and the impedance data are modeled using a multiparameter equivalent circuit model.

Deposition of CdSe Nanocrystals in Highly Porous SiO Matrices-In Situ Growth vs. Infiltration Methods.

Embedding quantum dots into porous matrices is a very beneficial approach for generating hybrid nanostructures with unique properties. In this contribution we explore strategies to dope nanoporous SiO thin films made by atomic layer deposition and selective wet chemical etching with precise control over pore size with CdSe quantum dots. Two distinct strategies were employed for quantum dot deposition: in situ growth of CdSe nanocrystals within the porous matrix via successive ionic layer adsorption reaction, and infiltration of pre-synthesized quantum dots.

Customizable ligand exchange on the surface of gold nanotriangles enables their application in LSPR-based sensing.

Nanomaterials made of noble metals have been actively utilized in sensorics and bioanalytics. Nanoparticles of anisotropic shapes are promising for increasing sensitivity due to the generated hotspots of electron density. Such structures can be effectively manufactured by a relatively accessible colloidal synthesis.

Sub-attosecond-precision optical-waveform stability measurements using electro-optic sampling.

The generation of laser pulses with controlled optical waveforms, and their measurement, lie at the heart of both time-domain and frequency-domain precision metrology. Here, we obtain mid-infrared waves via intra-pulse difference-frequency generation (IPDFG) driven by 16-femtosecond near-infrared pulses, and characterise the jitter of sub-cycle fractions of these waves relative to the gate pulses using electro-optic sampling (EOS). We demonstrate sub-attosecond temporal jitter at individual zero-crossings and sub-0.

Towards an understanding of physical activity-induced post-exertional malaise: Insights into microvascular alterations and immunometabolic interactions in post-COVID condition and myalgic encephalomyelitis/chronic fatigue syndrome.

Background: A considerable number of patients who contracted SARS-CoV-2 are affected by persistent multi-systemic symptoms, referred to as Post-COVID Condition (PCC). Post-exertional malaise (PEM) has been recognized as one of the most frequent manifestations of PCC and is a diagnostic criterion of myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS). Yet, its underlying pathomechanisms remain poorly elucidated.

Ultrasensitive Raman Gas Spectroscopy for Dinitrogen Sensing at the Parts-per-Billion Level.

Sensing small changes in the concentration of dinitrogen (N) is a difficult analytical task. As N-sensing is crucial for nitrogen cycle research in general and studies of denitrification in particular, researchers went to great lengths to develop techniques like the gas-flow-soil-core method, which achieves a precision of 200 ppb at 20 ppm of N. Here, we present a Raman gas spectroscopic technique based on high pressure, high laser power, and high-NA signal collection, which achieves a limit of detection (LoD) of 59 ppb N and a precision of 27 ppb at 10 ppm of N.