78 results match your criteria: "Leibniz-Institute for the Analysis of Biodiversity Change (LIB)[Affiliation]"

Comparing eDNA and Transect Methods for Aquatic Biodiversity Assessment in Lakes and Ponds.

Mol Ecol Resour

December 2024

Biodiversity and Ecosystem Research Group, Institute of Landscape Ecology, University of Münster, Münster, Germany.

Biodiversity monitoring increasingly relies on molecular methods such as eDNA metabarcoding. However, sound applications have so far been only established for a limited number of taxonomic groups. More information on the strengths and weaknesses of eDNA methods, especially for poorly covered groups, is essential for practical applications to achieve the highest possible reliability.

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Article Synopsis
  • Mesalina watsonana is a species complex found in Iran and surrounding countries, with recent studies revealing hidden diversity among its populations.
  • Detailed research identified seven distinct populations within this complex, each corresponding to different geographic regions.
  • The study proposes that these populations should be recognized as separate species, introducing six new species based on their unique morphological traits.
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A master in disguise? The rediscovery of Misumena bicolor Simon, 1875 (Araneae: Thomisidae).

Zootaxa

October 2024

Department of Zoology; State Museum of Natural History Karlsruhe; Erbprinzenstr. 13; 76133 Karlsruhe.

Misumena bicolor Simon, 1875, an enigmatic species known only from the male holotype collected on Corsica (France), has remained elusive since its initial description. In this study, we report new occurrences of M. bicolor from Sardinia (Italy) and Bavaria (Germany) based on male material, considerably expanding its known distribution.

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The current fourth edition of the Catalogue of Palaearctic Sericinae (Coleoptera: Scarabaeidae) summarizes new progress in the taxonomy of this group, which is now comprised of 1518 valid species group names in the Palaearctic Region (i.e., species and subspecies names).

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Field monitoring plays a crucial role in understanding insect dynamics within ecosystems. It facilitates pest distribution assessment, control measure evaluation, and prediction of pest outbreaks. Additionally, it provides important information on bioindicators with which the state of biodiversity and ecological integrity in specific habitats and ecosystems can be accurately assessed.

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The epithelial sodium channel (ENaC) plays a key role in osmoregulation in tetrapod vertebrates and is a candidate receptor for salt taste sensation. There are four ENaC subunits (α, β, γ, δ) which form αβγ- or δβγ ENaCs. While αβγ-ENaC is a 'maintenance protein' controlling sodium and potassium homeostasis, δβγ-ENaC might represent a 'stress protein' monitoring high sodium concentrations.

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Prevalence and distribution of trematodes hosted by Bithynia siamensis in Southern Thailand.

Parasitol Res

October 2024

Department of Biodiversity of Animals, Universität Hamburg, and Leibniz Institute for the Analysis of Biodiversity Change (LIB), Zoological Museum, Martin-Luther-King-Platz 3, 20146, Hamburg, Germany.

Article Synopsis
  • * Among the snails, 70 (4.95%) were found to be infected with various trematode species, identified as five different species from four families.
  • * DNA analysis of the cercariae supported the morphological findings, revealing the phylogenetic relationships among the identified trematode species.
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How extravagant ornamental traits evolve is a key question in evolutionary biology. Bird plumages are among the most elaborate ornaments, displaying almost all colours of the rainbow. Why and how birds evolved to be so colourful remains an open question with multiple and sometimes competing hypotheses.

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Evolving circuitries in plant signaling cascades.

J Cell Sci

September 2024

University of Goettingen, Institute for Microbiology and Genetics, Department of Applied Bioinformatics, Goldschmidtstr. 1, 37077 Goettingen, Germany.

Land plants are astounding processors of information; due to their sessile nature, they adjust the molecular programs that define their development and physiology in accordance with the environment in which they dwell. Transduction of the external input to the respective internal programs hinges to a large degree on molecular signaling cascades, many of which have deep evolutionary origins in the ancestors of land plants and its closest relatives, streptophyte algae. In this Review, we discuss the evolutionary history of the defining factors of streptophyte signaling cascades, circuitries that not only operate in extant land plants and streptophyte algae, but that also likely operated in their extinct algal ancestors hundreds of millions of years ago.

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Phylogenetic tree reconstruction with molecular data is important in many fields of life science research. The gold standard in this discipline is the phylogenetic tree reconstruction based on the Maximum Likelihood method. In this study, we present neural networks to predict the best model of sequence evolution and the correct topology for four sequence alignments of nucleotide or amino acid sequence data.

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Article Synopsis
  • Green algae in the genus Oophila are found in amphibian egg capsules mainly in North America and Europe, and their genetic relationships were studied using a dataset of protein-coding nuclear genes.
  • The research reveals that several types of Oophila are closely related to specific frog species across continents, as well as to free-living algae that are also part of the Oophila group.
  • The findings suggest the need for a taxonomic revision of these algae since the distinct relationships and varieties indicate they may represent different species within the Oophila clade.
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Prey size reflected in tooth wear: a comparison of two wolf populations from Sweden and Alaska.

Interface Focus

June 2024

Department of Vertebrates, Section Mammalogy and Paleoanthropology, Martin-Luther-King-Platz 3, Leibniz Institute for the Analysis of Biodiversity Change (LIB), Hamburg 20146, Germany.

Ingesta leaves distinct patterns on mammalian teeth during mastication. However, an unresolved challenge is how to include intraspecific variability into dietary reconstruction and the biomechanical aspects of chewing. Two extant populations of the grey wolf (), one from Alaska and one from Sweden, were analysed with consideration to intraspecific dietary variability related to prey size depending on geographical origin, sex and individual age as well as tooth function.

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Evolutionary assembly of the plant terrestrialization toolkit from protein domains.

Proc Biol Sci

July 2024

Department of Applied Bioinformatics, University of Goettingen, Institute for Microbiology and Genetics, Goldschmidtstr. 1, Goettingen 37077, Germany.

Land plants (embryophytes) came about in a momentous evolutionary singularity: plant terrestrialization. This event marks not only the conquest of land by plants but also the massive radiation of embryophytes into a diverse array of novel forms and functions. The unique suite of traits present in the earliest land plants is thought to have been ushered in by a burst in genomic novelty.

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Membrane intrinsic proteins (MIPs), including aquaporins (AQPs) and aquaglyceroporins (GLPs), form an ancient family of transporters for water and small solutes across biological membranes. The evolutionary history and functions of MIPs have been extensively studied in vertebrates and land plants, but their widespread presence across the eukaryotic tree of life suggests both a more complex evolutionary history and a broader set of functions than previously thought. That said, the early evolution of MIPs remains obscure.

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Classifications of forest vegetation types and characterization of related species assemblages are important analytical tools for mapping and diversity monitoring of forest communities. The discrimination of forest communities is often based on β-diversity, which can be quantified via numerous indices to derive compositional dissimilarity between samples. This study aims to evaluate the applicability of unsupervised classification for National Forest Inventory data from Georgia by comparing two cluster hierarchies.

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Article Synopsis
  • The viviparous eelpout, Zoarces viviparus, is a widely distributed fish in the North Atlantic that serves as an effective marine bioindicator for monitoring environmental health due to its sensitivity to pollution.
  • Researchers have successfully assembled its chromosome-level genome, which is 663 Mb in size and highly complete, containing 98% of a benchmark set of genes for ray-finned fish.
  • This genome assembly will facilitate future studies on how environmental changes, particularly global warming, impact this important species and its habitats.
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Caddisflies (Trichoptera) are among the most diverse groups of freshwater animals with more than 16 000 described species. They play a fundamental role in freshwater ecology and environmental engineering in streams, rivers and lakes. Because of this, they are frequently used as indicator organisms in biomonitoring programmes.

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A remarkable new deep-water skate, n. sp., is described based on eight specimens caught during different expeditions to the southern Madagascar Ridge in the southwestern Indian Ocean.

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Path for recovery: an ecological overview of the Jambato Harlequin Toad (Bufonidae: ) in its last known locality, Angamarca Valley, Ecuador.

PeerJ

June 2024

Universidad San Francisco de Quito USFQ, Colegio de Ciencias Biológicas y Ambientales COCIBA, Maestría en Ecología Tropical y Conservación, Quito, Ecuador.

The Jambato Harlequin toad (), a formerly abundant species in the Andes of Ecuador, faced a dramatic population decline in the 1980s, with its last recorded sighting in 1988. The species was considered Extinct by the IUCN until 2016, when a fortuitous discovery of one Jambato by a local boy reignited hope. In this study, we present findings from an investigation conducted in the Angamarca parish, focusing on distribution, abundance, habitat preferences, ecology, disease susceptibility, and dietary habits of the species.

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Species delimitation 4.0: integrative taxonomy meets artificial intelligence.

Trends Ecol Evol

August 2024

Max Planck Institute for Biogeochemistry, Department of Biogeochemical Integration, 07745 Jena, Germany; German Centre for Integrative Biodiversity Research (iDiv), Halle-Jena-Leipzig, Puschstrasse 4, 04103 Leipzig, Germany.

Although species are central units for biological research, recent findings in genomics are raising awareness that what we call species can be ill-founded entities due to solely morphology-based, regional species descriptions. This particularly applies to groups characterized by intricate evolutionary processes such as hybridization, polyploidy, or asexuality. Here, challenges of current integrative taxonomy (genetics/genomics + morphology + ecology, etc.

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Recurrent evolution of seaweed body plan complexity among photosynthetic eukaryotes.

Mol Plant

July 2024

Department of Applied Bioinformatics, Institute for Microbiology and Genetics, University of Göttingen, Goldschmidtstr. 1, 37077 Göttingen, Germany; Department of Applied Bioinformatics, Campus Institute Data Science (CIDAS), University of Göttingen, Goldschmidtstr. 1, 37077 Göttingen, Germany; Department of Applied Bioinformatics, Göttingen Center for Molecular Biosciences (GZMB), University of Göttingen, Goldschmidtstr. 1, 37077 Göttingen, Germany. Electronic address:

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Phylogeny and evolution of streptophyte algae.

Ann Bot

August 2024

Department of Applied Bioinformatics, Institute for Microbiology and Genetics, University of Goettingen, Goldschmidtstraße 1, 37077 Goettingen, Germany.

The Streptophyta emerged about a billion years ago. Nowadays, this branch of the green lineage is most famous for one of its clades, the land plants (Embryophyta). Although Embryophyta make up the major share of species numbers in Streptophyta, there is a diversity of probably >5000 species of streptophyte algae that form a paraphyletic grade next to land plants.

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