156 results match your criteria: "LOEWE Centre for Translational Biodiversity Genomics (LOEWE TBG)[Affiliation]"

The increasing number of contaminants released into the environment necessitates innovative strategies for their detection and identification, particularly in complex environmental matrices like hospital wastewater. Hospital effluents contain both natural and synthetic hormones that might significantly contribute to endocrine disruption in aquatic ecosystems. In this study, HT-EDA has been implemented to identify the main effect-drivers (testosterone, androsterone and norgestrel) from hospital effluent using microplate fractionation, the AR-CALUX bioassay and an efficient data processing workflow.

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Lichens are mutualistic associations consisting of a primary fungal host, and one to few primary phototrophic symbiont(s), usually a green alga and/or a cyanobacterium. They form complex thallus structures, which provide unique and stable habitats for many other microorganisms. Frequently isolated from lichens are the so-called black fungi, or black yeasts, which are mainly characterized by melanized cell walls and extremophilic lifestyles.

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Beyond the field: How pesticide drift endangers biodiversity.

Environ Pollut

December 2024

Department of Evolutionary Ecology & Environmental Toxicology, Faculty Biological Sciences (FB15), Goethe University Frankfurt, Max-von-Laue-Str. 13, 60438, Frankfurt am Main, Germany; Environmental Genomics Group, School of Biosciences, University of Birmingham, Birmingham, B15 2TT, UK; Department Environmental Media Related Ecotoxicology, Fraunhofer Institute for Molecular Biology and Applied Ecology IME, Schmallenberg, Germany; LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Frankfurt am Main, Germany.

Airborne pesticide drift poses a substantial environmental threat in agriculture, affecting ecosystems far from the application sites. This process, in which up to 25% of applied pesticides are carried by air currents, can transport chemicals over hundreds or even thousands of kilometers. Drift rates peak during the summer months, reaching as high as 60%, and are influenced by various factors, including wind speed, temperature, humidity, and soil type.

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Sufficiency health-wise: sustainable paths towards planetary and public health.

Front Public Health

December 2024

Global Health Hub Germany, Planetary Health Working Group, Berlin, Germany.

Planet Earth is threatened by the human population. Energy and resource use are far beyond the planet's carrying capacity. Planetary Health suggests an alternative idea of prosperity as the best possible human health for all within planetary boundaries.

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Article Synopsis
  • A new species has been described from Corsica, France, based on a single male specimen, identifying morphological differences from similar species in the group.
  • A phylogenetic tree was created using mitochondrial DNA sequences from 16 out of 28 recognized species, providing genetic support for the new species and hinting at the potential discovery of another nearby species.
  • The researchers used a low-cost next-generation sequencing method to analyze both mitochondrial and draft nuclear genomes, contributing important genetic data to enhance the understanding of this species and assist in future studies.
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Toward harnessing biodiversity-ecosystem function relationships in fungi.

Trends Ecol Evol

November 2024

Goethe University Frankfurt, Faculty of Biological Sciences, Institute for Ecology, Evolution and Diversity, 60438 Frankfurt am Main, Germany; University of Bayreuth, Bayreuth Center of Ecology and Environmental Research (BayCEER), Fungal Ecology, 95440 Bayreuth, Germany; Global Change Research Institute of the Czech Academy of Sciences, 60300 Brno, Czech Republic.

Fungi are crucial for terrestrial ecosystems, yet the role of fungal diversity in ecosystem functions remains unclear. We synthesize fungal biodiversity and ecosystem function (BEF) relationships, focusing on plant biomass production, carbon storage, decomposition, and pathogen or parasite resistance. The observed BEF relationships for these ecosystem functions vary in strength and direction, complicating generalizations.

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  • Alien invasive species, particularly the pathogen Aphanomyces astaci, are a major cause of biodiversity loss in European freshwater ecosystems, severely impacting noble crayfish populations.
  • This study investigates how the noble crayfish's immune response changes over time when exposed to A. astaci, revealing a lack of effective defense mechanisms against this highly virulent strain.
  • The findings indicate a correlation between the progression of the disease and pathogen load, suggesting that the immune system of noble crayfish is unable to control the infection, contributing to their decline.
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"True" cobras (genus ) are among the venomous snakes most frequently involved in snakebite accidents in Africa and Asia. The Cape cobra () is one of the African cobras of highest medical importance, but much remains to be learned about its venom. Here, we used a shotgun proteomics approach to better understand the qualitative composition of venom and tested its cytotoxicity and protease activity as well as its effect on intracellular Ca release and NO synthesis.

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Intraspecific venom variation in the Iberian asp viper (Vipera aspis zinnikeri) across natural and intensive agricultural habitats.

J Proteomics

January 2025

CIBIO, Centro de Investigação em Biodiversidade e Recursos Genéticos, InBIO Laboratório Associado, Campus de Vairão, Universidade do Porto, 4485-661 Vairão, Portugal; BIOPOLIS Program in Genomics, Biodiversity and Land Planning, CIBIO, Campus de Vairão, 4485-661 Vairão, Portugal. Electronic address:

Snake venom composition varies at different levels. To date, comparative venom studies have seldom taken into account the role of habitat type in the occurrence of snake venom variation. Here we investigated the presence of venom variation across different populations of the Iberian asp viper (Vipera aspis zinnikeri) inhabiting two contrasting habitats: natural vs.

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Unlabelled: Black soldier fly larvae (BSFL) have attracted attention due to their ability to upcycle various biological side streams into valuable biomass, such as proteins, lipids, and chitin. In this study, we investigated the impact of high-fiber diets on larval growth performance and the shift of microbes in the gut. We tested empty fruit bunches (EFB), potato pulp (PP), and cottonseed press cake (CPC), with chicken feed (CF) used as a control diet.

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Spiders are a hyperdiverse taxon and among the most abundant predators in nearly all terrestrial habitats. Their success is often attributed to key developments in their evolution such as silk and venom production and major apomorphies such as a whole-genome duplication. Resolving deep relationships within the spider tree of life has been historically challenging, making it difficult to measure the relative importance of these novelties for spider evolution.

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The systematics of the family Dendrodorididae, with only three valid genera, is a challenge for integrative taxonomists. Its members lack hard structures for morphological comparisons and their mitochondrial and nuclear markers provide contradictory phylogenetic signals, making phylogenetic reconstructions difficult. This molecular discordance has been hypothesized to be the result of nuclear pseudogenes or exogenous contamination.

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Lichens can withstand fluctuating environmental conditions such as hydration-desiccation cycles. Many species distribute across climate zones, suggesting population-level adaptations to conditions such as freezing and drought. Here, we aim to understand how climate affects population genomic patterns in lichenized fungi.

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Environmental modulators on the development of the raccoon roundworm (): Effects of temperature on the embryogenesis.

Int J Parasitol Parasites Wildl

December 2024

Institute for Ecology, Evolution and Diversity, Goethe-University, Max-von-Laue-Str. 13, Frankfurt, Main, D-60438, Germany.

Article Synopsis
  • * The study aimed to analyze how different ambient temperatures impact the embryonic development of these nematodes by incubating eggs at various temperatures ranging from 5 °C to 38 °C.
  • * Results showed that optimal temperatures for development were between 10 °C and 30 °C, with lower temperatures (5 °C) not producing larvae and higher temperatures (35 °C and 38 °C) causing egg degeneration.
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Mosquitoes on a chip-environmental DNA-based detection of invasive mosquito species using high-throughput real-time PCR.

PeerJ

October 2024

Institute for Ecology, Evolution and Diversity, Faculty of Biological Sciences, Goethe University Frankfurt, Frankfurt am Main, Hessen, Germany.

The monitoring of mosquitoes is of great importance due to their vector competence for a variety of pathogens, which have the potential to imperil human and animal health. Until now mosquito occurrence data is mainly obtained with conventional monitoring methods including active and passive approaches, which can be time- and cost-consuming. New monitoring methods based on environmental DNA (eDNA) could serve as a fast and robust complementary detection system for mosquitoes.

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Freshwater turtles are often used as terrarium pets, especially juveniles of exotic species. At the adult stage they are often released by their owners into the wild despite their high invasion potential. In Europe these thermophilic potentially invasive alien species occupy the habitats of the native European pond turtle Emys orbicularis (Linnaeus, 1758), with new records from the wild being made specifically in Eastern Europe (Latvia and Ukraine) during recent decades.

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Proteogenomics-guided functional venomics resolves the toxin arsenal and activity of Deinagkistrodon acutus venom.

Int J Biol Macromol

October 2024

Animal Venomics Lab, Fraunhofer Institute for Molecular Biology and Applied Ecology (IME), Ohlebergsweg 12, 35392 Giessen, Germany; LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Natural Product Genomics, Senckenberganlage 25, 60325 Frankfurt am Main, Germany; Branch for Bioresources, Fraunhofer Institute for Molecular Biology and Applied Ecology (IME), Ohlebergsweg 12, 35392 Giessen, Germany. Electronic address:

Snakebite primarily impacts rural communities of Africa, Asia, and Latin America. The sharp-nosed viper (Deinagkistrodon acutus) is among the snakes of highest medical importance in Asia. Despite various studies on its venom using modern venomics techniques, a comprehensive understanding of composition and function of this species' venom remains lacking.

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Article Synopsis
  • Pteronarcys californica, also known as the giant salmonfly, is the largest stonefly species in the western U.S., but its populations have significantly declined and are locally extinct in many rivers, especially in Utah, Colorado, and Montana.
  • Previous studies have looked at ecological conditions for its survival, but there's a gap in genetic research due to limited genomic resources.
  • This study presents a new, comprehensive genome assembly for P. californica, showcasing a large genome size of 2.40 gigabases and highlighting significant multi-species genomic variations and trends that could aid in understanding the species' genetics and conservation.
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Article Synopsis
  • * Researchers examined the venoms of the antlion Euroleon nostras and lacewing Chrysoperla carnea using various methods, revealing that although their venom structures were similar, their molecular compositions differed significantly.
  • * The antlion's complex venom system suggests evolutionary adaptations for its predatory lifestyle, as it produces unique toxins effective in immobilizing large prey, highlighting the ecological impacts of venom variability.
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Corrigendum to "High variation of virulence in Aphanomyces astaci strains lacks association with pathogenic traits and mtDNA haplogroups" [J. Invertebr. Pathol. 206 (2024) 108153].

J Invertebr Pathol

September 2024

LOEWE Centre for Translational Biodiversity Genomics (LOEWE-TBG), Senckenberg Biodiversity and Climate Research Centre, Georg-Voigt-Str. 14-16, 60325 Frankfurt am Main, Germany; Institute for Insect Biotechnology, Justus Liebig University Giessen, Heinrich-Buff-Ring 26, D-35392 Giessen, Germany.

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Venoms are a complex cocktail of potent biomolecules and are present in many animal lineages. Owed to their translational potential in biomedicine, agriculture and industrial applications, they have been targeted by several biodiscovery programs in the past. That said, many venomous animals are relatively small and deliver minuscule venom yields.

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Transcription factors (TFs) have an important role in the regulation of the gene expression network. The role of TFs in the immune response of freshwater crayfish is poorly understood, but leveraging the regulatory mechanisms of immune response could augment the resistance against the invasive oomycete pathogen, Aphanomyces astaci. Previous studies indicated that the TFs CCAAT/enhancer-binding protein (C/EBP) and putative Krüppel homolog-1 protein (Kr-h1) might play a role in immune and stress response of the noble crayfish (Astacus astacus).

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Interactions between phenanthrene exposure and historical chemical stress: Implications for fitness and ecological resilience of the sentinel species Daphnia magna.

Sci Total Environ

November 2024

Department of Evolutionary Ecology and Environmental Toxicology, Faculty of Biological Sciences, Goethe University, Max-von-Laue-Straße 13, 60438 Frankfurt am Main, Germany; Environmental Genomics Group, School of Biosciences, University of Birmingham, Birmingham B15 2TT, UK; Centre for Environmental Research and Justice (CERJ), University of Birmingham, Birmingham B15 2TT, UK; The Alan Turing Institute, British Library, 96 Euston Road, London NW1 2DB, UK.

Polycyclic aromatic hydrocarbons (PAHs) arise from incomplete combustion of oil, coal, and gasoline, with lipophilic properties facilitating their widespread distribution and persistence. Due to their biochemical attributes, PAHs can accumulate in animal tissues, potentially causing mutagenic and carcinogenic effects. Since the industrial revolution, PAH concentrations in the environment have risen, with lakes showing levels from 0.

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In a bioprospection for new antivirals, we tested nonribosomally biosynthesized polypeptide antibiotics in MDCK II cells for their actions on influenza A and B viruses (IAV/IBV). Only tolypin, a mixture of closely related 16-residue peptaibiotics from the fungus Tolypocladium inflatum IE 1897, showed promising activity. It was selected for further investigation and structural characterization by ultrahigh performance liquid chromatography coupled to high-resolution mass spectrometry (UHPLC-HR-MS/MS) and ultrahigh performance liquid chromatography coupled to in-source collision-induced dissociation tandem mass spectrometry (UHPLC-isCID-HR-MS/MS), revealing 12 partially co-eluting individual peptides that were fully sequenced.

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Current Insights into Sublethal Effects of Pesticides on Insects.

Int J Mol Sci

May 2024

Institute for Insect Biotechnology, Justus Liebig University of Giessen, Heinrich-Buff-Ring 26-32, 35392 Giessen, Germany.

The effect of pesticides on insects is often discussed in terms of acute and chronic toxicity, but an important and often overlooked aspect is the impact of sublethal doses on insect physiology and behavior. Pesticides can influence various physiological parameters of insects, including the innate immune system, development, and reproduction, through a combination of direct effects on specific exposed tissues and the modification of behaviors that contribute to health and reproductive success. Such behaviors include mobility, feeding, oviposition, navigation, and the ability to detect pheromones.

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