2,036 results match your criteria: "Kyoto Institute of Nutrition & Pathology[Affiliation]"

Subatomic structure of orthorhombic thaumatin at 0.89 Å reveals that highly flexible conformations are crucial for thaumatin sweetness.

Biochem Biophys Res Commun

April 2024

Research Institute for Sustainable Humanosphere, Kyoto University, Gokasho, Uji, Kyoto, 611-0011, Japan; Institute of Advanced Energy, Kyoto University, Gokasho, Uji, Kyoto, 611-0011, Japan.

Thaumatin is a sweet-tasting protein that elicits a sweet taste at a threshold of approximately 50 nM. Structure-sweetness relationships in thaumatin suggest that the basicity of two amino acids residues, Arg82 and Lys67, are particularly responsible for sweetness. Using tetragonal crystals, our structural analysis suggested that flexible sidechain conformations of these two residues play an important role in sweetness.

View Article and Find Full Text PDF

We evaluated the benefits of heat-stable carotenoid-producing Bacillus marisflavi SH8 spores individually and in combination with non-pigmented Bacillus subtilis SH23 spores on growth, colour change, nutritional content, innate immunity, and gut microbiota of white-leg shrimp. White-leg shrimp (Litopenaeus vannamei; n = 30 per tank; 2 tanks per group) were provided feed without (control group) or with SH8, SH23, or mixed spores (total, 1 × 106 cfu/g pellet) for 28 d. The SH8 and SH8-23 combination groups had significantly higher specific growth rates (9.

View Article and Find Full Text PDF

Background: Progressive familial intrahepatic cholestasis type 2 (PFIC2) is an ultra-rare disease caused by mutations in the ABCB11 gene. This study aimed to understand the course of PFIC2 during the native liver period.

Methods: From November 2014 to October 2015, a survey to identify PFIC2 patients was conducted in 207 hospitals registered with the Japanese Society of Pediatric Gastroenterology, Hepatology, and Nutrition.

View Article and Find Full Text PDF

Adequacy and Distribution Equity of Nutrition Supplies across China.

Nutrients

January 2024

Graduate School of Environmental Studies, Tohoku University, Sendai 980-8577, Japan.

Procuring food enriched with diverse nutrients is pivotal for maintaining a robust immune system. However, the food system is now unprecedentedly globalized and faces challenges arising from climate change, pandemics, and political unrest. This study aims to illuminate the gap in exploring the adequacy and distribution equity of nutrition supplies in response to potential trade fluctuations and restrictions on agrifood within China's local agriculture endowments.

View Article and Find Full Text PDF

A Kpna1-deficient psychotropic drug-induced schizophrenia model mouse for studying gene-environment interactions.

Sci Rep

February 2024

Department of Cell Biology and Biochemistry, Division of Medicine, Faculty of Medical Sciences, University of Fukui, 23-3 Matsuoka Shimoaizuki, Eiheiji-cho, Yoshida-gun, Fukui, 910-1193, Japan.

KPNA1 is a mediator of nucleocytoplasmic transport that is abundantly expressed in the mammalian brain and regulates neuronal differentiation and synaptic function. De novo mutations in Kpna1 have been identified using genome-wide association studies in humans with schizophrenia; however, it remains unclear how KPNA1 contributes to schizophrenia pathogenesis. Recent studies have suggested a complex combination of genetic and environmental factors that are closely related to psychiatric disorders.

View Article and Find Full Text PDF

Type 2 diabetes mellitus (T2DM) is an epidemiological risk factor for dementia and has been implicated in multifactorial pathologies, including neuroinflammation. In the present study, we aimed to elucidate the potential anti-inflammatory effects of imeglimin, a novel antidiabetic agent, on high-glucose (HG)-stimulated microglia. Mouse microglial BV2 cells were stimulated with HG in the presence or absence of imeglimin.

View Article and Find Full Text PDF

Wang et al. report that clinical dipeptidyl peptidase-4 (DPP-4) inhibitors show little effect on microbial DPP-4 produced by Bacteroides genus. Furthermore, oral administration of microbial DPP-4 to high-fat diet-fed mice was found to reduce plasma active glucagon-like peptide-1 levels through an increase in extraluminal intestinal tissular DPP-4 activity, resulting in reduced glucose-induced insulin levels and exacerbated glucose tolerance.

View Article and Find Full Text PDF

Energy reserves, primarily stored in the insect's fat body, are essential for physiological processes such as reproduction and cocoon formation. However, whether these processes are mutually constraining is unknown. Here, we showed that cocoon-free silkworms accumulate amino acid constituents of silk proteins in the hemolymph and maintain lipid and sugar reserves in the pupal fat body by repressing the expression of sericin and fibroin genes in the middle and posterior silk glands, respectively, via butterfly pierisin-1A catalytic domain expression.

View Article and Find Full Text PDF

Objectives: Immune checkpoint inhibitors and enfortumab vedotin have opened new avenues for sequential treatment strategies for locally advanced/metastatic urothelial carcinoma (la/mUC). In the pre-enfortumab vedotin era, many patients could not receive third-line treatment owing to rapid disease progression and poor general status. This study aimed to analyze real-world sequential treatment practices for la/mUC in Japan, with a focus on patients who do not receive third-line treatment.

View Article and Find Full Text PDF

Oxygen-evolving photosystem II structures during S-S-S transitions.

Nature

February 2024

Research Institute for Interdisciplinary Science, Graduate School of Natural Science and Technology, Okayama University, Okayama, Japan.

Article Synopsis
  • Photosystem II (PSII) initiates water oxidation through a four-step cycle involving S states (i=0-4) at a manganese-calcium-oxygen (MnCaO) cluster, ultimately leading to oxygen production.
  • Employing pump-probe serial femtosecond crystallography, the study tracks structural changes in PSII from nanoseconds to milliseconds following illumination, highlighting rapid dynamics of a tyrosine residue and surrounding molecules connected to the electron transfer process.
  • A notable finding includes the appearance and subsequent disappearance of a water molecule near the D1 subunit’s Glu189, indicating its role in forming the O6 oxygen during this fast-paced electron and proton transfer sequence.
View Article and Find Full Text PDF

To improve the coverage in bottom-up proteomics, S-aminoethylation of cysteine residues (AE-Cys) was carried out with 2-bromoethylamine, followed by cleavage with lysyl endopeptidase (Lys-C) or Lys-C/trypsin. A model study with bovine serum albumin showed that the C-terminal side of AE-Cys was successfully cleaved by Lys-C. The frequency of side reactions at amino acids other than Cys was less than that in the case of carbamidomethylation of Cys with iodoacetamide.

View Article and Find Full Text PDF
Article Synopsis
  • A study investigated the genetic factors influencing alcohol consumption in 175,672 Japanese individuals, focusing on a specific genetic variant (rs671) associated with drinking behavior.
  • The analysis found significant genetic interactions, identifying three key genetic locations in individuals with one variant (wild-type homozygotes) and six in those with two variants (heterozygotes), with some linked to esophageal cancer risk.
  • The research highlights how genetic makeup can shape alcohol consumption patterns and potentially increase the risk of alcohol-related diseases in different ancestral groups.
View Article and Find Full Text PDF

Introduction: This study aimed to investigate the association between scan frequency and intermittently scanned continuous glucose monitoring (isCGM) metrics and to clarify the factors affecting scan frequency in adults with type 1 diabetes mellitus (T1D).

Methods: We enrolled adults with T1D who used FreeStyle® Libre. Scan and self-monitoring of blood glucose (SMBG) frequency and CGM metrics from the past 90-day glucose data were collected.

View Article and Find Full Text PDF

Safety and glycemic control with insulin degludec use in clinical practice: results from a 3-year Japanese post-marketing surveillance study.

Diabetol Int

January 2024

Diabetes Therapeutics and Research Center, Institute of Advanced Medical Sciences, Tokushima University, 3-18-15 Kuramoto-cho, Tokushima, 770-8503 Japan.

Introduction: Insulin degludec (degludec) is a basal insulin with a long duration of action. This post-marketing surveillance study monitored safety and glycemic control during use of degludec for 3 years in normal clinical practice in Japan.

Materials And Methods: This multicenter, open-label, observational study included patients with diabetes receiving degludec in Japan between 2013 and 2019.

View Article and Find Full Text PDF

Sucrose is a disaccharide that is degraded into fructose and glucose in the small intestine. High-sucrose and high-fructose diets have been reported, using two-dimensional imaging, to alter the intestinal morphology and the expression of genes associated with sugar transport, such as sodium glucose co-transporter 1 (SGLT1), glucose transporter 2 (GLUT2), and glucose transporter 5 (GLUT5). However, it remains unclear how high-fructose and high-sucrose diets affect the expression of sugar transporters and the intestinal morphology in the whole intestine.

View Article and Find Full Text PDF

The mixed effect of Endocrine-Disrupting chemicals on biological age Acceleration: Unveiling the mechanism and potential intervention target.

Environ Int

February 2024

Department of Urology and Institute of Urology, West China Hospital, Sichuan University, Chengdu 610041, China; Institute of Oncology Research (IOR), Oncology Institute of Southern Switzerland (IOSI), CH6500 Bellinzona, Switzerland. Electronic address:

Introduction: Although previous studies investigated the potential adverse effects of endocrine-disrupting chemicals (EDCs) on biological age acceleration and aging-related diseases, the mixed effect of multiple types of EDCs on biological age acceleration, including its potential underlying mechanism, remains unclear.

Methods: Data from the National Health and Nutrition Examination Survey (NHANES) were used to analyze biological age measures, including Klemera-Doubal method biological age (KDM-BA), phenotypic age, and homeostatic dysregulation (HD). Weight quantile sum (WQS) regression was performed to screen biological age-related EDCs (BA-EDCs) and assess the mixed effect of BA-EDCs on biological age acceleration and aging-related disease.

View Article and Find Full Text PDF

Human regulates endoderm patterning at the primitive gut tube stage.

PNAS Nexus

January 2024

Department of Diabetes, Endocrinology and Nutrition, Graduate School of Medicine, Kyoto University, Kyoto 606-8507, Japan.

Article Synopsis
  • The transcriptional factor RFX6 is linked to Mitchell-Riley syndrome (MRS), which causes neonatal diabetes and defects in certain parts of the digestive system.
  • The study involved creating different human stem cell lines to investigate how RFX6 affects early endoderm development, revealing that RFX6 levels rise significantly during a specific developmental stage.
  • Findings showed that RFX6 regulates key genes involved in the development of the posterior and mid-hindgut but does not impact anterior gut development, indicating that issues in early endoderm formation contribute to the MRS-related defects.
View Article and Find Full Text PDF
Article Synopsis
  • Healthy eating is crucial for bolstering nutrition and immunity, and a study in western Kenya explored its link to stunting in school-aged children in a region where infectious diseases are common.
  • Involving 260 children aged 9-17, researchers used food frequency questionnaires and anthropometric measurements to assess diet quality and stunting, while also factoring in school attendance, household wealth, and infections like Schistosoma mansoni.
  • Results showed that 15% of children were stunted and 76.2% were infected with S. mansoni, with better diet quality correlated with lower stunting risk, particularly in those with light or no infections.
View Article and Find Full Text PDF
Article Synopsis
  • Wheat has higher crude protein and amino acids than corn but contains anti-nutritional factors that can negatively affect ruminant digestion.
  • The study examined how replacing corn with different percentages of wheat affects liver metabolism in Tibetan lambs over 130 days.
  • Results showed that a 10% wheat diet improved immune markers and altered liver cell arrangements compared to higher wheat diets, along with significant changes in gene expression related to various biological pathways.
View Article and Find Full Text PDF

Exploring small non-coding RNAs as blood-based biomarkers to predict Alzheimer's disease.

Cell Biosci

January 2024

Nutrition and Metabolic Health Research Group, Department of Biochemistry and Biotechnology, Rovira i Virgili University (URV), 43201, Reus, Spain.

Background: Alzheimer's disease (AD) diagnosis relies on clinical symptoms complemented with biological biomarkers, the Amyloid Tau Neurodegeneration (ATN) framework. Small non-coding RNA (sncRNA) in the blood have emerged as potential predictors of AD. We identified sncRNA signatures specific to ATN and AD, and evaluated both their contribution to improving AD conversion prediction beyond ATN alone.

View Article and Find Full Text PDF
Article Synopsis
  • Idiopathic pulmonary fibrosis (IPF) is a serious lung disease that leads to extensive lung scarring and has a grim outlook for patients, with unclear molecular mechanisms and their links to clinical signs.
  • Researchers created a Bayesian network using data from 206 IPF patients and 36 healthy controls, combining proteome data from serum, lab tests, and clinical findings to visualize relationships between biomarkers and symptoms.
  • Key findings identified specific biomolecules related to IPF, such as TGF-β signaling, fibrosis markers, and clinical symptoms, suggesting potential pathways for understanding the disease and developing targeted therapies.
View Article and Find Full Text PDF

mRNA export is an essential pathway for the regulation of gene expression. In humans, closely related RNA helicases, UAP56 and URH49, shape selective mRNA export pathways through the formation of distinct complexes, known as apo-TREX and apo-AREX complexes, and their subsequent remodeling into similar ATP-bound complexes. Therefore, defining the unidentified components of the apo-AREX complex and elucidating the molecular mechanisms underlying the formation of distinct apo-complexes is key to understanding their functional divergence.

View Article and Find Full Text PDF
Article Synopsis
  • N-3 polyunsaturated fatty acids (PUFAs) from fish may have anti-inflammatory effects that could help prevent allergies in children, but previous studies on this link have produced mixed results.
  • A large study in Japan analyzed maternal intake of n-3 PUFAs during pregnancy and its impact on children developing allergies by age 3, utilizing a dataset of over 72,000 children.
  • Results indicated that higher maternal intake of n-3 PUFAs was associated with a lower risk of certain allergic conditions like rhinoconjunctivitis, rhinitis, and eczema in children, but did not significantly impact food allergies.
View Article and Find Full Text PDF

Commensal lifestyle regulated by a negative feedback loop between Arabidopsis ROS and the bacterial T2SS.

Nat Commun

January 2024

National Key Laboratory of Agricultural Microbiology, Hubei Hongshan Laboratory, Hubei Key Laboratory of Plant Pathology, College of Plant Science and Technology, Huazhong Agricultural University, Wuhan, 430070, China.

Despite the plant health-promoting effects of plant microbiota, these assemblages also comprise potentially detrimental microbes. How plant immunity controls its microbiota to promote plant health under these conditions remains largely unknown. We find that commensal bacteria isolated from healthy Arabidopsis plants trigger diverse patterns of reactive oxygen species (ROS) production dependent on the immune receptors and completely on the NADPH oxidase RBOHD that selectively inhibited specific commensals, notably Xanthomonas L148.

View Article and Find Full Text PDF

The Mechanism Underlying the Hypoglycemic Effect of Epimedin C on Mice with Type 2 Diabetes Mellitus Based on Proteomic Analysis.

Nutrients

December 2023

National Engineering Laboratory for Resource Development of Endangered Crude Drugs in Northwest China, Academician and Expert Workstations in Puer City of Yunnan Province, College of Food Engineering and Nutritional Science, Provincial Research Station of Se-Enriched Foods in Hanyin County of Shaanxi Province, International Joint Research Center of Shaanxi Province for Food and Health Sciences, Shaanxi Normal University, Xi'an 710119, China.

Type 2 diabetes mellitus (T2DM) has become a worldwide public health problem. Epimedin C is considered one of the most important flavonoids in , a famous edible herb in China and Southeast Asia that is traditionally used in herbal medicine to treat diabetes. In the present study, the therapeutic potential of epimedin C against T2DM was ascertained using a mouse model, and the mechanism underlying the hypoglycemic activity of epimedin C was explored using a label-free proteomic technique for the first time.

View Article and Find Full Text PDF