384 results match your criteria: "Krasnoyarsk Science Center[Affiliation]"

A noninvasive and qualitative bioluminescent assay for express diagnostics of athletes' responses to physical exertion.

Luminescence

March 2021

Department of Biophysics, Institute of Fundamental Biology and Biotechnology, Siberian Federal University, Svobodny prospect 79, Krasnoyarsk, Russia.

Upcoming professional sports authorities seek rapid noninvasive biosensing tools for regular monitoring of athletes' physiological states. The analysis of saliva through luminescence-based biosensors has been perceived as a suitable candidate for such purposes. The present study reports a qualitative bioluminescence assay based on a coupled enzyme system that consists of bacterial luciferase (BLuc) and nicotinamide adenine dinucleotide (NADH):flavin mononucleotide (FMN) oxidoreductase (Red), BLuc-Red, for the express diagnostics of athletes' stress levels before and after physical exertion.

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Siberian larch (Larix sibirica Ledeb.) mitochondrial genome assembled using both short and long nucleotide sequence reads is currently the largest known mitogenome.

BMC Genomics

September 2020

Laboratory of Forest Genomics, Genome Research and Education Center, Institute of Fundamental Biology and Biotechnology, Siberian Federal University, Krasnoyarsk, 660036, Russia.

Background: Plant mitochondrial genomes (mitogenomes) can be structurally complex while their size can vary from ~ 222 Kbp in Brassica napus to 11.3 Mbp in Silene conica. To date, in comparison with the number of plant species, only a few plant mitogenomes have been sequenced and released, particularly for conifers (the Pinaceae family).

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The aim of this work was to study the one-pot synthesis of sorbitol via hydrolysis-hydrogenation of cellulose in the presence of Ru-containing composites based on HPWO supported on ZrO and NbO (Ru-PW/ZrO and Ru-PW/NbO). The main parameters impacted the reaction rate and yield of sorbitol, i.e.

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The paper studies the combined effects of beta-emitting radionuclide tritium and Humic Substances (HS) on the marine unicellular microorganism-luminous bacteria-under conditions of low-dose radiation exposures (<0.04 Gy). Tritium was used as a component of tritiated water.

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Newly developed millennial δC larch tree-ring chronology from Siberia allows reconstruction of summer (July) vapor pressure deficit (VPD) changes in a temperature-limited environment. VPD increased recently, but does not yet exceed the maximum values reconstructed during the Medieval Warm Anomaly. The most humid conditions in the Siberian North were recorded in the Early Medieval Period and during the Little Ice Age.

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De novo sequencing, assembly and functional annotation of Armillaria borealis genome.

BMC Genomics

September 2020

Laboratory of Forest Genomics, Genome Research and Education Center, Institute of Fundamental Biology and Biotechnology, Siberian Federal University, 660036, Krasnoyarsk, Russia.

Background: Massive forest decline has been observed almost everywhere as a result of negative anthropogenic and climatic effects, which can interact with pests, fungi and other phytopathogens and aggravate their effects. Climatic changes can weaken trees and make fungi, such as Armillaria more destructive. Armillaria borealis (Marxm.

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Genetic diversity and colonization routes of noble salmons were studied using a partial nucleotide sequence of the mitochondrial COI gene. The brown trout S. trutta, which is the most ancient species of the genus, was concluded to originate from the modern southeastern Pontic-Caspian area, which is currently inhabited by members of the subspecies S.

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Porous films have been prepared from degradable polymers-poly-3-hydroxybutyrate (PHB), poly-ε-caprolactone (PCL) and a blend of these polymers (1:3)-by adding porogen (camphor) to the polymer solution at 10%, 30% or 50% of the total mass of the polymer and porogen, and leaching it out afterwards. After the rinse, camphor content in films decreased to about 0.025%.

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We report a novel bioluminescent aptasensor, which consists of 2'-F-RNA aptamer modules joined into a bi-specific aptamer construct. One aptamer module binds the analyte, then after structural rearrangement the second module recruits non-covalently Ca-dependent photoprotein obelin from the solution, thus providing a bioluminescent signal. This concept allows using free protein as a reporter, which brings such advantages as no need for aptamer-protein conjugation, a possibility of thermal re-folding of aptamer component with no harm to a protein, and simpler detection protocol.

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A new modelling of the COVID 19 pandemic.

Chaos Solitons Fractals

October 2020

Hillel Yaffe Medical Center, Rappoport Medical School, Technion, Haifa, Israel.

А model of coronavirus incidence is proposed. Process of disease development is represented as analogue of first- and second order phase transition in physical systems. The model is very simple in terms of the data necessary for the calculations.

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The purpose of the present study was to investigate the efficacy of the experimental formulations of the metribuzin (MET) and tribenuron-methyl (TBM) herbicides embedded in the matrix of degradable poly-3-hydroxybutyrate blended with wood flour in field-grown tomato and beet crops infested by weeds. There is a necessity to develop environmentally friendly and effective means to protect plants because of the shortcomings of the free herbicide forms such as the environmentally unsafe spray application of solutions and suspensions of the widespread metribuzin and tribenuron-methyl herbicides, removal from soil during watering events and rains, and transport to natural aquatic environments, where the herbicides accumulate in the trophic chains of biota. Free TBM is also rapidly inactivated in soil and metabolized to nontoxic products in plants.

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The present study addresses the herbicidal activity and biological effects of the metribuzin (MET) and tribenuron-methyl (TBM) herbicides used to control various weed species ( and ). The effects of the free herbicides and the herbicides embedded in granules of degradable polymer poly-3-hydroxybutyrate [P(3HB)] blended with birch wood flour were compared. Metribuzin, regardless of the form, caused 100% mortality of the three weeds by day 21.

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Mannose-binding lectin (MBL) encoded by MBL2 gene is a protein with the ability to form carbohydrate complexes with microbial wall promoting their subsequent elimination. Genetically determined levels of MBL can modify the risk and clinical characteristics of many infectious diseases. The frequency of MBL2 genotypes exhibits significant population differences.

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Sensitivity to acetylsalicylic acid (ASA) is important in the treatment of patients with coronary heart disease (CHD) after coronary artery bypass grafting (CABG). Patients were divided into ASA sensitive (sASA) and ASA resistant (rASA) by the activity of platelet aggregation induced arachidonic acid (ARA) together with ASA. Induced platelet aggregation activity was studied in sASA and rASA patients with CHD before and after CABG.

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Ca-regulated photoproteins responsible for bioluminescence of a variety of marine organisms are single-chain globular proteins within the inner cavity of which the oxygenated coelenterazine, 2-hydroperoxycoelenterazine, is tightly bound. Alongside with native coelenterazine, photoproteins can also use its synthetic analogues as substrates to produce flash-type bioluminescence. However, information on the effect of modifications of various groups of coelenterazine and amino acid environment of the protein active site on the bioluminescent properties of the corresponding semi-synthetic photoproteins is fragmentary and often controversial.

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Anxiety-depressive disorders (ADD) are a risk factor of cardiovascular mortality in patients with coronary artery disease (CAD). Acute coronary syndrome (ACS) is the main clinical manifestation of a progressing CAD. Metabolic processes disorder in platelets can be one of the causes of cardiovascular complications in patients with ACS and concomitant ADD.

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Successful incorporation of soil-like substrate (SLS) into biotechnical life support systems is often complicated by the necessity to maintain the balance between flows of mineral elements taken up from the substrate by growing plants and mineral elements added to the SLS as components of mineralized plant inedible biomass. An imbalance between these two flows can be caused by the addition of recalcitrant plant waste such as wheat straw. The purpose of this study was to determine whether the availability of essential nutrients to be taken up by the roots of the wheat plants grown on the SLS could be enhanced by supplementing the SLS with the products derived from wheat straw subjected to different levels of physicochemical mineralization in the aqueous solution of hydrogen peroxide.

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Coast redwood is a very important endemic conifer timber species in Southern Oregon and Northern California in the USA. Due to its good wood properties and fast growth rate it can be considered as a prospective timber species also in other countries with similar or changing toward similar climatic conditions due to global climate warming, such as Germany. In general, it is frost sensitive and suffers from freezing temperatures.

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Cupriavidus necator B-10646 growth and polyhydroxyalkanoates production on different plant oils.

Int J Biol Macromol

December 2020

Siberian Federal University, 79 Svobodny pr., 660041 Krasnoyarsk, Russian Federation; Institute of Biophysics SB RAS, Federal Research Center "Krasnoyarsk Science Center SB RAS", 50/50 Akademgorodok, Krasnoyarsk 660036, Russian Federation. Electronic address:

The study addresses the growth of the wild-type strain Cupriavidus necator B-10646 and synthesis of polyhydroxyalkanoates by this strain on media containing plant oils with different compositions of fatty acids: palm, Siberian oilseed, and refined and unrefined sunflower seed oils. The study showed that the best carbon substrate was palm oil. Comparison of fatty acid compositions of the starting oils and unutilized residual substrates showed that C.

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Bioluminescent proteins are widely used as reporter molecules in various in vitro and in vivo assays. The smallest isoform of Metridia luciferase (MLuc7) is a highly active, naturally secreted enzyme which, along with other luciferase isoforms, is responsible for the bright bioluminescence of marine copepod . In this study, we report the construction of two variants of a hybrid protein consisting of MLuc7 and 14D5a single-chain antibody to the surface glycoprotein E of tick-borne encephalitis virus as a model fusion partner.

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Surface nanobubbles at hydrophobic interfaces now attract much attention in various fields but their role in wetting-related phenomena is still unclear. Herein, we report the effect of a preliminary contact of "hot" solids with cold water previously proposed for generation of surface nanobubbles, on wettability of compact materials and flotation of particulate galena (PbS), sphalerite (ZnS), and Pb-Zn sulfide ore. Atomic force microscopy was applied to visualize the nanobubbles at galena crystals heated in air and contacted with cold water; X-ray photoelectron spectroscopy was used to characterize the surface composition of minerals.

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Diabetic nephropathy, hypertension, and glomerulonephritis are the most common causes of chronic kidney diseases (CKD). Since CKD of various origins may not become apparent until kidney function is significantly impaired, a differential diagnosis and an appropriate treatment are needed at the very early stages. Conventional biomarkers may not have sufficient separation capabilities, while a full-proteomic approach may be used for these purposes.

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In this paper we continue working on our theory of electrical double layers resulting exclusively from dissociation of a solid electrolyte, which we previously proposed as a medium for catalytic interaction between solid cellulose and solid acid catalysts of hydrolysis. Two theoretical unidimensional models of the inner grain volume are considered: an infinitely long cylindrical pore, and a gel electrolyte near a grain outer surface. Despite the model simplicity, the predictions for the cylindrical pore case are in semi-quantitative agreement with literature data on electroosmotic experiments, adequately explaining high proton selectivity of sulfonic membranes, and decline of such selectivity at high background acid concentration.

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Complexation plays an important role in many biological phenomena, the analysis of different samples, optimization of separation processes, and increasing the pharmacological activity of drugs. This paper discusses the features of using mobility shift affinity capillary electrophoresis for studying strong complexation. Electrophoretic peaks for this case are often triangular.

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The solvolytic conversion of softening bituminous coal at 380 °C in solvents derived from the commercial hydrocarbon byproducts and residues from coal and petroleum processing was studied. Hydrogen-donor tetrahydronaphthalene (THN) and nondonor 1-methylnaphthalene (MN) were also used for comparison. The high-boiling solvents of different chemical classes (highly aromatic coal tar, its anthracene fraction, and low-aromatic heavy gas oil of catalytic cracking of the oil residue) and the H-donor THN solvent were found to exhibit high efficiency for coal conversion into quinoline-soluble products.

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