9,111 results match your criteria: "KTH Royal Institute of Technology; jesper.gantelius@scilifelab.se.[Affiliation]"

Article Synopsis
  • * The latest update significantly expands its scope, now covering over 34,000 unique protein sequences from more than 2,000 organisms, enhancing detection and analysis speed using advanced structural alignment tools.
  • * Improvements include a user-friendly interface, better data search features, a new statistics page for metrics based on repeat classifications, and enhanced APIs to handle more data, aiding in the understanding and annotation of STRP functions.
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The early evolution of sex chromosomes has remained obscure for more than a century. The Vandiemenella viatica species group of morabine grasshoppers is highly suited for studying the early stages of sex chromosome divergence and degeneration of the Y chromosome. This stems from the fact that neo-XY sex chromosomes have independently evolved multiple times by X-autosome fusions with different autosomes.

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Article Synopsis
  • - The complex [Ag(IPr)(dpa)][PF] (1) was synthesized and characterized to explore its photophysical properties in comparison to [Cu(IPr)(dpa)][PF] (2), both intended for use in blue-emitting light-emitting electrochemical cells (LECs).
  • - Key findings show that complex 1 emits fluorescence while complex 2 exhibits thermally activated delayed fluorescence, highlighting a shift in the nature of their emitting states due to the different metal ions used.
  • - Additionally, complex 1 demonstrates varying emission based on its crystallinity in thin films and displays stable electrical performance in LECs lasting over 100 hours, a significant improvement over the few minutes of stability observed with complex 2.*
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Background: Dengue virus (DENV) infection, spread by mosquitoes, is a significant public health concern in tropical and subtropical regions. Among the four distinct serotypes of DENV (DENV-1 to DENV-4), DENV-2 is associated with the highest number of fatalities worldwide. However, there is no specific treatment available for dengue patients caused by DENV-2.

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Article Synopsis
  • - Mozambique has one of the highest rates of HIV, ranking sixth globally in prevalence and fourth in new infections, leading to a significant role for government-owned print media in informing the public about the epidemic since 1986.
  • - The article uses article and frame analysis to explore how HIV and AIDS have been framed in media, indicating that media representation impacts public understanding and behavior regarding the disease.
  • - The study highlights three tensions faced in framing HIV and AIDS: balancing government health ideology with market influences, navigating global actors' impact versus national interests, and portraying government success despite societal gaps in effective responses.
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The impact of hydroclimate-driven periodic runoff on hydropower production and management.

Sci Rep

October 2024

Department of Sustainable Development, Environmental Science and Engineering (SEED), KTH Royal Institute of Technology, Stockholm, 100 44, Sweden.

Article Synopsis
  • - The study examines how periodic runoff driven by hydroclimate changes affects hydropower operations and production efficiency, focusing on a biennial cycle of wet and dry years.
  • - Using hydrologic stochastic processes and seven different hydroclimate scenarios, researchers found that managing hydropower based on accurate forecasts for varying runoff conditions is vital for optimizing efficiency and output.
  • - Results indicate that making decisions based on incorrect annual runoff forecasts leads to significant reductions in power generation efficiency and output, emphasizing the importance of accurate seasonal predictions for effective hydropower management.
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Article Synopsis
  • Tumoroscope is a new probabilistic model that accurately identifies cancer clones and their locations in tumors using pathological images, whole exome sequencing, and spatial transcriptomics data, achieving near single-cell resolution.
  • Unlike previous methods, Tumoroscope effectively resolves the proportions of different cancer clones within spatial transcriptomics spots.
  • The model has been applied to prostate and breast cancer datasets, revealing spatial patterns of clone distribution and allowing the analysis of clone-specific gene expression.
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Given the substantial effects of agricultural practices on the environment, this paper introduces a novel stakeholder-based framework for assessing the ecosystem services (ESs) provided by agricultural areas. Ecosystem services include essential functions such as water supply, food production, carbon storage, soil erosion control, and habitat support. In addition to ESs, water footprint is also taken into account to evaluate the impacts of agricultural activities on water resources.

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Alpha-solenoids are a significant and diverse subset of structured tandem repeat proteins (STRPs) that are important in various domains of life. This review examines their structural and functional diversity and highlights their role in critical cellular processes such as signaling, apoptosis, and transcriptional regulation. Alpha-solenoids can be classified into three geometric folds: low curvature, high curvature, and corkscrew, as well as eight subfolds: ankyrin repeats; Huntingtin, elongation factor 3, protein phosphatase 2A, and target of rapamycin; armadillo repeats; tetratricopeptide repeats; pentatricopeptide repeats; Pumilio repeats; transcription activator-like; and Sel-1 and Sel-1-like repeats.

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Optimized method for fluorine-18 radiolabeling of Affibody molecules using RESCA.

EJNMMI Radiopharm Chem

October 2024

Department of Medicinal Chemistry, Science for Life Laboratory, Uppsala University, Uppsala, Sweden.

Article Synopsis
  • The study focuses on enhancing the labeling of Affibody molecules with Al[F]F for PET imaging, utilizing the Restrained Complexing Agent (RESCA) to facilitate the process under mild conditions.
  • The researchers optimized the labeling method, determining that the best conditions involved using fluorine-18, AlCl, and specific temperatures and times for effective reaction and purification.
  • The results indicated that the newly established method is efficient, reproducible, and maintains the biological functionality of the labeled Affibody molecules, with potential applications in peptide-based imaging agents.
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Smartphone-driven centrifugal microfluidics for diagnostics in resource limited settings.

Biomed Microdevices

October 2024

Division of Nanobiotechnology, Department of Protein Science, Science for Life Laboratory, KTH Royal Institute of Technology, Solna, Sweden.

The broad availability of smartphones has provided new opportunities to develop less expensive, portable, and integrated point-of-care (POC) platforms. Here, a platform that consists of three main components is introduced: a portable housing, a centrifugal microfluidic disc, and a mobile phone. The mobile phone supplies the electrical power and serves as an analysing system.

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This study investigates the impact of quadriceps fatigue on lower limb biomechanics during the landing phase of a single-leg vertical jump (SLJ) in 25 amateur male basketball players from Ningbo University. Fatigue was induced through single-leg knee flexion and extension exercises until task failure. Kinematic and dynamic data were collected pre-fatigue (PRF) and post-fatigue (POF) using the Vicon motion capture system and the AMTI force platform and analyzed using an OpenSim musculoskeletal model.

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Unveiling the Molecular Mechanisms of Glioblastoma through an Integrated Network-Based Approach.

Biomedicines

October 2024

Centre for Host-Microbiome Interactions, Faculty of Dentistry, Oral and Craniofacial Sciences, King's College London, London SE1 9RT, UK.

: Despite current treatments extending the lifespan of Glioblastoma (GBM) patients, the average survival time is around 15-18 months, underscoring the fatality of GBM. This study aims to investigate the impact of sample heterogeneity on gene expression in GBM, identify key metabolic pathways and gene modules, and explore potential therapeutic targets. : In this study, we analysed GBM transcriptome data derived from The Cancer Genome Atlas (TCGA) using genome-scale metabolic models (GEMs) and co-expression networks.

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Physiologically relevant human skin models that include key skin cell types can be used fordrug testing, skin pathology studies, or clinical applications such as skin grafts. However, there is still no golden standard for such a model. We investigated the potential of a recombinant functionalized spider silk protein, FN-silk, for the construction of a dermal, an epidermal, and a bilayered skin equivalent (BSE).

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Article Synopsis
  • Students and educators often believe in neuromyths—misconceptions about intelligence and learning that are not scientifically backed.
  • Research shows that giving textual explanations can help correct these neuromyths, but people may still be influenced by the incorrect information afterward.
  • Experiments revealed that feedback can help both students and educators change their beliefs about these myths, with students showing improved reasoning accuracy after receiving feedback, while teachers did not show the same improvement.
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Article Synopsis
  • Researchers developed eco-friendly absorbent materials from agroindustrial by-products and a natural cross-linker (genipap oil) to replace fossil-based options.
  • The new materials exhibited impressive saline retention and mechanical strength, outperforming noncross-linked variants, while being safe for the environment.
  • The biodegradable products broke down in under six weeks without harming soil health, demonstrating the potential for renewable superabsorbents in hygiene applications using cost-effective processes.
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Article Synopsis
  • Potassium and sodium ions are essential for plant growth, but traditional methods for measuring their concentrations harm plants and yield delayed results.* -
  • A new dual microneedle sensor allows for nondestructive and real-time monitoring of K and Na levels in living plants, showing quick response times and high accuracy.* -
  • This technology can track the movement of these ions from hydroponic solutions to the plant stem, paving the way for innovative smart agriculture solutions.*
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Oral-gut microbiome interactions in advanced cirrhosis: characterisation of pathogenic enterotypes and salivatypes, virulence factors and antimicrobial resistance.

J Hepatol

October 2024

Roger Williams Institute of Liver Studies, Faculty of Life Sciences and Medicine, King's College London, London, United Kingdom; Institute of Liver Studies, King's College Hospital NHS Foundation Trust, London, United Kingdom. Electronic address:

Article Synopsis
  • The study investigates how the gut and oral microbiomes are affected in patients with varying severities of cirrhosis, focusing on the presence of harmful bacteria and resistance genes.
  • It involves analysis of samples from multiple groups: healthy controls, stable cirrhosis, decompensated cirrhosis, acute-on-chronic liver failure patients, and those with severe infections but no cirrhosis.
  • Results show increased overlap of oral and gut microbiomes and greater amounts of virulence factors and antibiotic resistance genes as cirrhosis severity increases, suggesting a shift towards more harmful bacteria and a loss of beneficial ones.
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Surface-derived groundwater contamination in Gulu District, Uganda: Chemical and microbial tracers.

Sci Total Environ

December 2024

Department of Earth and Environmental Sciences and Williamson Research Centre for Molecular Environmental Science, The University of Manchester, Williamson Building, Oxford Road, Manchester M13 9PL, United Kingdom. Electronic address:

Groundwater is consumed by over 2 billion people globally, though it can be impacted by microbial and chemical contamination in both rural and (peri-)urban areas. This issue is particularly pertinent in regions like East Africa, where rapid urbanisation has strained local infrastructure, including water and sanitation systems. We use selected tracers of human and animal waste to assess the quality of community drinking sources with regards to surface-derived groundwater inputs and to compare urban versus rural water quality, under the rapidly developing urban area of Gulu, Northern Uganda.

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Estradiol-mediated enhancement of the human ectocervical epithelial barrier correlates with desmoglein-1 expression in the follicular menstrual phase.

Front Endocrinol (Lausanne)

October 2024

Department of Medicine Solna, Division of Infectious Diseases, Karolinska Institutet, Department of Infectious Diseases, Karolinska University Hospital, Center for Molecular Medicine, Stockholm, Sweden.

Article Synopsis
  • The cervicovaginal epithelial barrier is vital for protecting the female reproductive tract from sexually transmitted infections, and its function is influenced by hormones like estradiol and progesterone.
  • A study involved collecting mucosal and blood samples from Kenyan female sex workers, analyzing them at different menstrual cycle phases to assess the hormones' impact on gene and protein expression in the ectocervical mucosa.
  • Findings indicated that during the follicular phase, higher estradiol levels were linked to better epithelial structure and increased barrier integrity, but there were no significant correlations involving progesterone or during the luteal phase.
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Article Synopsis
  • Naming odors is tricky and often leads to misnaming, especially among older adults, indicating a complex connection between smell perception and language processing.
  • A study of nearly 2,500 older adults in Sweden shows that many misnaming instances use vague or generalized terms, like "fruit" or "sweet," which still relate closely to the intended odor.
  • The research suggests that the way people misname odors—often using familiar or related terms—can actually help predict their ability to identify those odors, highlighting the interplay between language and olfactory recognition.
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Wood of broad-leaf tree species is a valued source of renewable biomass for biorefinery and a target for genetic improvement efforts to reduce its recalcitrance. Glucuronoxylan (GX) plays a key role in recalcitrance through its interactions with cellulose and lignin. To reduce recalcitrance, we modified wood GX by expressing GH10 and GH11 endoxylanases from Aspergillus nidulans in hybrid aspen (Populus tremula L.

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Article Synopsis
  • * Time-resolved photoelectron spectroscopy has been used to study how different layers in a lead sulfide quantum dot solar cell contribute to photovoltage generation and charge separation.
  • * The research shows that all layers play a role in photovoltage generation, with a gold contact on quantum dots being crucial for efficient charge separation and reduced recombination, providing insights for future optimization of similar devices.
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Assessing the Usage and Usability of a Mental Health Advice Telephone Service in Uganda: Mixed Methods Study.

J Med Internet Res

October 2024

Swedish Program for ICT in Developing Regions (SPIDER), Department of Computer and Systems Science, Stockholm University, Stockholm, Sweden.

Background: Harnessing mobile health (mHealth) solutions could improve the delivery of mental health services and mitigate their impact in Uganda and similar low-resource settings. However, successful adoption requires that mHealth solutions have good usability. We have previously implemented a telephone service to provide mental health information and advice in English and Luganda, utilizing an automated interactive voice response (IVR) system linked to live agents, including mental health care workers and peer support workers.

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