962 results match your criteria: "International School for Advanced Studies SISSA.[Affiliation]"

Mapping lumbar efferent and afferent spinal circuitries via paddle array in a porcine model.

J Neurosci Methods

May 2024

Department of Neurosurgery, Center for Translational Neural Prosthetics and Interfaces, Houston Methodist Research Institute, 6550 Fannin Street, Houston, TX 77030, United States; Department of Neurosurgery, Center for Neuroregeneration, Houston Methodist Research Institute, 6550 Fannin Street, Houston, TX 77030, United States. Electronic address:

Background: Preclinical models are essential for identifying changes occurring after neurologic injury and assessing therapeutic interventions. Yucatan miniature pigs (minipigs) have brain and spinal cord dimensions like humans and are useful for laboratory-to-clinic studies. Yet, little work has been done to map spinal sensorimotor distributions and identify similarities and differences between the porcine and human spinal cords.

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Humans use space to think of and communicate the flow of time. This spatial representation of time is influenced by cultural habits so that in left-to-right reading cultures, short durations and past events are mentally positioned to the left of long durations and future events. The STEARC effect (Space Temporal Association of Response Codes) shows a faster classification of short durations/past events with responses on the left side of space and of long durations/future events with responses on the right side.

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Viral RNA Replication Suppression of SARS-CoV-2: Atomistic Insights into Inhibition Mechanisms of RdRp Machinery by ddhCTP.

J Chem Inf Model

March 2024

Dipartimento di Chimica E Tecnologie Chimiche, Laboratorio PROMOCS Cubo 14C, Università della Calabria, RENDE (CS) I-87036, Italy.

The nonstructural protein 12, known as RNA-dependent RNA polymerase (RdRp), is essential for both replication and repair of the viral genome. The RdRp of SARS-CoV-2 has been used as a promising candidate for drug development since the inception of the COVID-19 spread. In this work, we performed an investigation on the insertion of the naturally modified pyrimidine nucleobase ddhCTP into the SARS-CoV-2 RdRp active site, in a comparative analysis with the natural one (CTP).

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Decision making frequently depends on monitoring the duration of sensory events. To determine whether, and how, the perception of elapsed time derives from the neuronal representation of the stimulus itself, we recorded and optogenetically modulated vibrissal somatosensory cortical activity as male rats judged vibration duration. Perceived duration was dilated by optogenetic excitation.

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The COVID-19 pandemic has given rise to post-acute cognitive symptoms, often described as 'brain fog'. To comprehensively grasp the extent of these issues, we conducted a study integrating traditional neuropsychological assessments with experimental cognitive tasks targeting attention control, working memory, and long-term memory, three cognitive domains most commonly associated with 'brain fog'. We enrolled 33 post-COVID patients, all self-reporting cognitive difficulties, and a matched control group (N = 27) for cognitive and psychological assessments.

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Driving Hebbian plasticity over ventral premotor-motor projections transiently enhances motor resonance.

Brain Stimul

April 2024

Centro Studi e Ricerche in Neuroscienze Cognitive, Dipartimento di Psicologia "Renzo Canestrari", Campus di Cesena, Alma Mater Studiorum Università di Bologna, 47521, Cesena, Italy; Centro de Investigación en Neuropsicología y Neurociencias Cognitivas (CINPSI Neurocog), Universidad Católica Del Maule, 346000, Talca, Chile. Electronic address:

Background: Making sense of others' actions relies on the activation of an action observation network (AON), which maps visual information about observed actions onto the observer's motor system. This motor resonance process manifests in the primary motor cortex (M1) as increased corticospinal excitability finely tuned to the muscles engaged in the observed action. Motor resonance in M1 is facilitated by projections from higher-order AON regions.

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Two-dimensional (2D) materials have attracted tremendous interest ever since the isolation of atomically thin sheets of graphene in 2004 due to the specific and versatile properties of these materials. However, the increasing production and use of 2D materials necessitate a thorough evaluation of the potential impact on human health and the environment. Furthermore, harmonized test protocols are needed with which to assess the safety of 2D materials.

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Conformation and dynamics of partially active linear polymers.

Soft Matter

February 2024

Department of Physics and Astronomy, University of Padova, Via Marzolo 8, I-35131 Padova, Italy.

Article Synopsis
  • The study investigates how the location of active segments in isolated polymers affects their behavior and properties in non-equilibrium conditions.
  • Changing the position of these active segments can transition the polymer's diffusion from an active-like state to a passive-like one.
  • Additionally, slight adjustments to how these active segments propel themselves can improve diffusion rates, which could have implications for understanding active biological systems like bacteria and worms.
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Non-coding RNAs (ncRNAs), generated from nonprotein coding DNA sequences, constitute 98-99% of the human genome. Non-coding RNAs encompass diverse functional classes, including microRNAs, small interfering RNAs, PIWI-interacting RNAs, small nuclear RNAs, small nucleolar RNAs, and long non-coding RNAs. With critical involvement in gene expression and regulation across various biological and physiopathological contexts, such as neuronal disorders, immune responses, cardiovascular diseases, and cancer, non-coding RNAs are emerging as disease biomarkers and therapeutic targets.

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Improving acute stroke assessment in non-enhanced computed tomography: automated tool for early ischemic lesion volume detection.

Neurol Sci

July 2024

Clinical Unit of Neurology, Department of Medicine, Surgery and Health Sciences, University Hospital and Health Services of Trieste-ASUGI, University of Trieste, Strada di Fiume 447, 34149, Trieste, Italy.

Background And Objectives: ASPECTs is a widely used marker to identify early stroke signs on non-enhanced computed tomography (NECT), yet it presents interindividual variability and it may be hard to use for non-experts. We introduce an algorithm capable of automatically estimating the NECT volumetric extension of early acute ischemic changes in the 3D space. We compared the power of this marker with ASPECTs evaluated by experienced practitioner in predicting the clinical outcome.

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Article Synopsis
  • The blood-brain barrier (BBB) protects the central nervous system (CNS), where cytokines (CKs) play crucial roles in immune responses and tissue healing.
  • Pro-inflammatory CKs can lead to negative outcomes in the CNS by promoting inflammation, recruiting immune cells, and disrupting synapses, particularly in conditions like multiple sclerosis (MS).
  • The review discusses recent insights into CKs in both healthy and inflamed CNS, highlighting the connection between the adaptive immune system and neurophysiology.
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A well-corroborated numerical methodology ensuring reproducibility in the modeling of pharmaceutical aerosols deposition in the respiratory system via CFD-DEM simulations within the RANS framework is currently missing. Often, inadequately clarified assumptions and approximations and the lack of evidences on their quantitative impact on the simulated deposition phenomenology, make a direct comparison among the different theoretical studies and the limited number of experiments a very challenging task. Here, with the ultimate goal of providing a critical analysis of some crucial computational aspects of aerosols deposition, we address the issues of velocity fluctuations propagation in the upper intra-thoracic airways and of the persistence of secondary flows using the SimInhale reference benchmark.

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On the sign of the linear magnetoelectric coefficient in CrO.

J Phys Condens Matter

January 2024

Materials Theory, ETH Zurich, Wolfgang-Pauli-Strasse 27, 8093 Zurich, Switzerland.

We establish the sign of the linear magnetoelectric (ME) coefficient,, in chromia, CrO. CrOis the prototypical linear ME material, in which an electric (magnetic) field induces a linearly proportional magnetization (polarization), and a single magnetic domain can be selected by annealing in combined magnetic () and electric () fields. Opposite antiferromagnetic (AFM) domains have opposite ME responses, and which AFM domain corresponds to which sign of response has previously been unclear.

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Structural heterogeneity of the ion and lipid channel TMEM16F.

Nat Commun

January 2024

WPI Nano Life Science Institute, Kanazawa University, Kakuma-machi, 920-1192, Kanazawa, Japan.

Article Synopsis
  • Transmembrane protein 16F (TMEM16F) is a calcium-activated protein that works as both an ion channel and a phospholipid scramblase, showing diverse structural forms that impact its function.
  • Using atomic force microscopy, researchers observed various TMEM16F assemblies that have not been seen in previous high-resolution studies, revealing different dimerization and protomer orientations.
  • The study establishes a link between calcium-induced activation and structural changes in TMEM16F, suggesting that its conformational diversity plays a crucial role in its physiological activities, particularly in lipid and ion transport.
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Recently, a confluence between trends in neuroscience and machine learning has brought a renewed focus on unsupervised learning, where sensory processing systems learn to exploit the statistical structure of their inputs in the absence of explicit training targets or rewards. Sophisticated experimental approaches have enabled the investigation of the influence of sensory experience on neural self-organization and its synaptic bases. Meanwhile, novel algorithms for unsupervised and self-supervised learning have become increasingly popular both as inspiration for theories of the brain, particularly for the function of intermediate visual cortical areas, and as building blocks of real-world learning machines.

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Glycosylation of blood cells during the onset and progression of atherosclerosis and myocardial infarction.

Trends Mol Med

February 2024

CÚRAM, SFI Research Centre for Medical Devices, University of Galway, Galway, Ireland; Department of Molecular Medicine, University of Padua, Padua, Italy. Electronic address:

Protein glycosylation controls cell-cell and cell-extracellular matrix (ECM) communication in immune, vascular, and inflammatory processes, underlining the critical role of this process in the identification of disease biomarkers and the design of novel therapies. Emerging evidence highlights the critical role of blood cell glycosylation in the pathophysiology of atherosclerosis (ATH) and myocardial infarction (MI). Here, we review the role of glycosylation in the interplay between blood cells, particularly erythrocytes, and endothelial cells (ECs), highlighting the involvement of this critical post/cotranslational modification in settings of cardiovascular disease (CVD).

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Cleavage and formation of phosphodiester bonds in nucleic acids is accomplished by large cellular machineries composed of both protein and RNA. Long thought to rely on a two-metal-ion mechanism for catalysis, structure comparisons revealed many contain highly spatially conserved second-shell monovalent cations, whose precise function remains elusive. A recent high-resolution structure of the spliceosome, essential for pre-mRNA splicing in eukaryotes, revealed a potassium ion in the active site.

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TurboGenius is an open-source Python package designed to fully control ab initio quantum Monte Carlo (QMC) jobs using a Python script, which allows one to perform high-throughput calculations combined with TurboRVB [Nakano et al. J. Phys.

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How the human brain represents millisecond unit of time is far from clear. A recent neuroimaging study revealed the existence in the human premotor cortex of a topographic representation of time i.e.

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We develop a Gutzwiller theory for the nonequilibrium steady states of a strongly interacting photon fluid driven by a non-Markovian incoherent pump. In particular, we explore the collective modes of the system across the out-of-equilibrium insulator-superfluid transition of the system, characterizing the diffusive Goldstone mode in the superfluid phase and the excitation of particles and holes in the insulating one. Observable features in the pump-and-probe optical response of the system are highlighted.

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We introduce a novel approach to evaluate the nonstabilizerness of an N-qubits matrix product state (MPS) with bond dimension χ. In particular, we consider the recently introduced stabilizer Rényi entropies (SREs). We show that the exponentially hard evaluation of the SREs can be achieved by means of a simple perfect sampling of the many-body wave function over the Pauli string configurations.

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RNA recognition motifs (RRMs) play a pivotal role in RNA metabolism and the regulation of gene expression. Owing to their plasticity and fuzziness, targeting RRM/RNA interfaces with small molecules is a daunting challenge for drug discovery campaigns. The U2AF2 splicing factor, which recognizes the polypyrimidine (polyPy) sequence of premature messenger (pre-m)RNA, exhibits a dynamic architecture consisting of two RRMs joined by a disordered linker.

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Graphene oxide nanosheets (GO) were reported to alter neurobiological processes involving cell membrane dynamics. GO ability to reversibly downregulate specifically glutamatergic synapses underpins their potential in future neurotherapeutic developments. Aberrant glutamate plasticity contributes to stress-related psychopathology and drugs which target dysregulated glutamate represent promising treatments.

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The development of quantum simulators, artificial platforms where the predictions of many-body theories of correlated quantum materials can be tested in a controllable and tunable way, is one of the main challenges of condensed matter physics. Here we introduce artificial lattices made of lead halide perovskite nanocubes as a new platform to simulate and investigate the physics of correlated quantum materials. We demonstrate that optical injection of quantum confined excitons in this system realizes the two main features that ubiquitously pervade the phase diagram of many quantum materials: collective phenomena, in which long-range orders emerge from incoherent fluctuations, and the excitonic Mott transition, which has one-to-one correspondence with the insulator-to-metal transition described by the repulsive Hubbard model in a magnetic field.

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A key feature of advanced motion processing in the primate dorsal stream is the existence of pattern cells-specialized cortical neurons that integrate local motion signals into pattern-invariant representations of global direction. Pattern cells have also been reported in rodent visual cortex, but it is unknown whether the tuning of these neurons results from truly integrative, nonlinear mechanisms or trivially arises from linear receptive fields (RFs) with a peculiar geometry. Here, we show that pattern cells in rat primary (V1) and lateromedial (LM) visual cortex process motion direction in a way that cannot be explained by the linear spatiotemporal structure of their RFs.

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