Characterization of differentially regulated carboxypeptidase (metallopeptidase M32) protein in Miltefosine resistant Leishmania donovani parasites.

Introduction: Carboxypeptidase, a member of the metallopeptidase M32 family, catalyses the C-terminal hydrolysis of a variety of peptides and proteins in the presence of metal ions.

Objective: To characterize Leishmania donovani carboxypeptidase (LdCP) in miltefosine (MIL) drug-resistant parasites.

Methods: We performed the MTT assay and cell cycle analysis to confirm the MIL resistance of clinical isolates.

A decade of conservation agriculture in intensive cereal systems: Transitioning to soil resilience and stable yield trends in a climate crisis.

Climate change jeopardizes the food security gains achieved in India since the Green Revolution, especially by impacting the productivity of the rice-wheat system in the Indo-Gangetic Plain, a region that serves as the 'breadbasket' of South Asia. In this study, we characterized the potential of long-term conservation agriculture (CA) based management practices (i.e.

Unravelling the molecular mechanism underlying drought stress tolerance in Dinanath (Pennisetum pedicellatum Trin.) grass via integrated transcriptomic and metabolomic analyses.

Dinanath grass (Pennisetum pedicellatum Trin.) is an extensively grown forage grass known for its significant drought resilience. In order to comprehensively grasp the adaptive mechanism of Dinanath grass in response to water deficient conditions, transcriptomic and metabolomics were applied in the leaves of Dinanath grass exposed to two distinct drought intensities (48-hour and 96-hour).

Data from collection and analysis of RNA sequencing data from pearl millet.

Pearl millet (, also known as ) is a cereal crop that has a C4 photosynthesis system and that can grow and develop seeds even under stressed conditions including drought-stressed, high temperature-stressed and nutrient-poor conditions. In previous studies, transcriptomes of pearl millet were studied by RNA sequencing (RNA-Seq) to understand mechanisms regulating its development and tolerance to such stressed conditions. Here, RNA-Seq reads from 565 pearl millet samples from 25 projects in the NCBI (National Center for Biotechnology Information) BioProject database were collected and mapped to the pearl millet reference genome to obtain read counts and transcripts per million (TPM) for each pearl millet gene.

Introgression of Δ-pyrroline-5-carboxylate synthetase (PgP5CS) confers enhanced resistance to abiotic stresses in transgenic tobacco.

Δ-pyrroline-5-carboxylate synthetase (P5CS) is one of the key regulatory enzymes involved in the proline biosynthetic pathway. Proline acts as an osmoprotectant, molecular chaperone, antioxidant, and regulator of redox homeostasis. The accumulation of proline during stress is believed to confer tolerance in plants.

Isolation, Characterization, and Expression Analysis of NAC Transcription Factor from (Burm. f.) Nees and Their Role in Andrographolide Production.

(Burm. f.) Nees is an important medicinal plant known for its bioactive compound andrographolide.

Data of RNA sequencing of pearl millet panicles treated with a high temperature.

Pearl millet () is a cereal crop that can grow and set seeds even under drought, high temperatures and nutrient-poor conditions. Panicles of two pearl millet cultivars that differ in seed-setting rates were exposed to two different high-temperature treatments at three different developmental stages with three replicates, and RNA was prepared from these panicles. The resulting RNA samples were subjected to sequencing with the Illumina NovaSeq 6000 sequencer.

Genetic gains in early maturing maize hybrids developed by the International Maize and Wheat Improvement Center in Southern Africa during 2000-2018.

Genetic gain estimation in a breeding program provides an opportunity to monitor breeding efficiency and genetic progress over a specific period. The present study was conducted to (i) assess the genetic gains in grain yield of the early maturing maize hybrids developed by the International Maize and Wheat Improvement Center (CIMMYT) Southern African breeding program during the period 2000-2018 and (ii) identify key agronomic traits contributing to the yield gains under various management conditions. Seventy-two early maturing hybrids developed by CIMMYT and three commercial checks were assessed under stress and non-stress conditions across 68 environments in seven eastern and southern African countries through the regional on-station trials.

Loss-of-function of triacylglycerol lipases are associated with low flour rancidity in pearl millet [ (L.) R. Br.].

Pearl millet is an important cereal crop of semi-arid regions since it is highly nutritious and climate resilient. However, pearl millet is underutilized commercially due to the rapid onset of hydrolytic rancidity of seed lipids post-milling. We investigated the underlying biochemical and molecular mechanisms of rancidity development in the flour from contrasting inbred lines under accelerated aging conditions.

Multigene phylogeny and haplotype analysis reveals predominance of oomycetous fungus, (McRae) associated with fruit rot disease of arecanut in India.

An oomycetous fungus causing fruit rot is the most devastating disease of arecanut in different agro-climatic zones of Karnataka with varied climatic profiles. The main aim of this investigation was to characterize the geo-distant populations infecting arecanut using robust morphological, multi-gene phylogeny and haplotype analysis. A total of 48 geo-distant fruit rot infected samples were collected during the South-West monsoon of 2017-19.

NIR Instruments and Prediction Methods for Rapid Access to Grain Protein Content in Multiple Cereals.

Achieving global goals for sustainable nutrition, health, and wellbeing will depend on delivering enhanced diets to humankind. This will require instantaneous access to information on food-source quality at key points of agri-food systems. Although laboratory analysis and benchtop NIR spectrometers are regularly used to quantify grain quality, these do not suit all end users, for example, stakeholders in decentralized agri-food chains that are typical in emerging economies.

Optimizing Crop Water Use for Drought and Climate Change Adaptation Requires a Multi-Scale Approach.

Selection criteria that co-optimize water use efficiency and yield are needed to promote plant productivity in increasingly challenging and variable drought scenarios, particularly dryland cereals in the semi-arid tropics. Optimizing water use efficiency and yield fundamentally involves transpiration dynamics, where restriction of maximum transpiration rate helps to avoid early crop failure, while maximizing grain filling. Transpiration restriction can be regulated by multiple mechanisms and involves cross-organ coordination.

Laboratory phenomics predicts field performance and identifies superior indica haplotypes for early seedling vigour in dry direct-seeded rice.

Seedling vigour is an important agronomic trait and is gaining attention in Asian rice (Oryza sativa) as cultivation practices shift from transplanting to forms of direct seeding. To understand the genetic control of rice seedling vigour in dry direct seeded (aerobic) conditions we measured multiple seedling traits in 684 accessions from the 3000 Rice Genomes (3K-RG) population in both the laboratory and field at three planting depths. Our data show that phenotyping of mesocotyl length in laboratory conditions is a good predictor of field performance.

Pearl Millet: A Climate-Resilient Nutricereal for Mitigating Hidden Hunger and Provide Nutritional Security.

Pearl millet [ (L.) R. Br.

Development of Sorghum Genotypes for Improved Yield and Resistance to Grain Mold Using Population Breeding Approach.

The infection caused by grain mold in rainy season grown sorghum deteriorates the physical and chemical quality of the grain, which causes a reduction in grain size, blackening, and making them unfit for human consumption. Therefore, the breeding for grain mold resistance has become a necessity. Pedigree breeding has been widely used across the globe to tackle the problem of grain mold.

Frequency of resistance alleles to Cry1Ac toxin from cotton bollworm, Helicoverpa armigera (Hübner) collected from Bt-cotton growing areas of Telangana state of India.

Transgenic cotton expressing Bacillus thuringiensis (Bt) cry1Ac and cry2Ab toxin genes is widely cultivated to manage bollworm complex in India. Cotton bollworm Helicoverpa armigera (Hübner) is one of the most serious of this complex. It is likely to evolve resistance to Cry toxins in view of continual selection pressure due to extensive cultivation of Bt cotton.

Discovery and validation of candidate genes for grain iron and zinc metabolism in pearl millet [Pennisetum glaucum (L.) R. Br.].

Pearl millet is an important crop for alleviating micronutrient malnutrition through genomics-assisted breeding for grain Fe (GFeC) and Zn (GZnC) content. In this study, we identified candidate genes related to iron (Fe) and zinc (Zn) metabolism through gene expression analysis and correlated it with known QTL regions for GFeC/GZnC. From a total of 114 Fe and Zn metabolism-related genes that were selected from the related crop species, we studied 29 genes.

Aquaporins are main contributors to root hydraulic conductivity in pearl millet [Pennisetum glaucum (L) R. Br.].

Pearl millet is a key cereal for food security in arid and semi-arid regions but its yield is increasingly threatened by water stress. Physiological mechanisms relating to conservation of soil water or increased water use efficiency can alleviate that stress. Aquaporins (AQP) are water channels that mediate root water transport, thereby influencing plant hydraulics, transpiration and soil water conservation.

Genome-wide identification of meiotic recombination hot spots detected by SLAF in peanut (Arachis hypogaea L.).

Recombination hot spots (RHP), caused by meiosis, are considered to play crucial roles in improvement and domestication of crop. Cultivated peanut is one of the most important rich-source of oil and protein crops. However, no direct scale of recombination events and RHP have been estimated for peanut.

On the relationships between plant species richness and the environment: a case study in Eastern Ghats, India.

Many places of the earth support high plant species richness, but emphasis is given to biodiversity hotspots with rich endemic species under threats of destruction by anthropogenic interventions. This definitely underplays species conservation at several places significant for optimisation of preserving natural ecosystems. Here we explore influences of climate, physiography and disturbance on plant species richness of the Eastern Ghats.

Comparison of the microbial composition of African fermented foods using amplicon sequencing.

Fermented foods play a major role in the diet of people in Africa, where a wide variety of raw materials are fermented. Understanding the microbial populations of these products would help in the design of specific starter cultures to produce standardized and safer foods. In this study, the bacterial diversity of African fermented foods produced from several raw materials (cereals, milk, cassava, honey, palm sap, and locust beans) under different conditions (household, small commercial producers or laboratory) in 8 African countries was analysed by 16S rRNA gene amplicon sequencing during the Workshop "Analysis of the Microbiomes of Naturally Fermented Foods Training Course".

Effect of Excess Iodine Intake from Iodized Salt and/or Groundwater Iodine on Thyroid Function in Nonpregnant and Pregnant Women, Infants, and Children: A Multicenter Study in East Africa.

Background: Acute excess iodine intake can damage the thyroid, but the effects of chronic excess iodine intake are uncertain. Few data exist for pregnant and lactating women and infants exposed to excessive iodine intake.

Methods: This was a multicenter cross-sectional study.

Future irrigation expansion outweigh groundwater recharge gains from climate change in semi-arid India.

Simultaneous effects of future climate and irrigation intensification on surface and groundwater systems are not well understood. Efforts are needed to understand the future groundwater availability and associated surface flows under business-as-usual management to formulate policy changes to improve water sustainability. We combine measurements with integrated modeling (MIKE SHE/MIKE11) to evaluate the effects of future climate (2040-2069), with and without irrigation expansion, on water levels and flows in an agricultural watershed in low-storage crystalline aquifer region of south India.

Stress Inducible Overexpression of Leads to Improved Drought and Salt Stress Tolerance in Peanut ( L.).

Peanut is an important oilseed and food legume cultivated as a rain-fed crop in semi-arid tropics. Drought and high salinity are the major abiotic stresses limiting the peanut productivity in this region. Development of drought and salt tolerant peanut varieties with improved yield potential using biotechnological approach is highly desirable to improve the peanut productivity in marginal geographies.