9 results match your criteria: "Institute of Scientific Instruments of the Academy of Sciences of the Czech Republic[Affiliation]"
Plant Physiol
March 2018
Department of Experimental Plant Biology, Faculty of Sciences, Charles University, Prague, Czech Republic.
Biogenesis of the plant secondary cell wall involves many important aspects, such as phenolic compound deposition and often silica encrustation. Previously, we demonstrated the importance of the exocyst subunit EXO70H4 for biogenesis of the trichome secondary cell wall, namely for deposition of the autofluorescent and callose-rich cell wall layer. Here, we reveal that EXO70H4-driven cell wall biogenesis is constitutively active in the mature trichome, but also can be activated elsewhere upon pathogen attack, giving this study a broader significance with an overlap into phytopathology.
View Article and Find Full Text PDFJ Neural Transm (Vienna)
July 2017
Central European Institute of Technology (CEITEC), Brain and Mind Research Programme, Masaryk University, Brno, Czech Republic.
This study investigates how complex motor-cognitive activities are processed in the subthalamic nucleus (STN) and internal globus pallidum (GPi), as adverse neuropsychiatric effects may accompany deep brain stimulation (DBS), mainly in Parkinson's disease (PD) and STN-DBS. Dystonia patients with GPi-DBS electrodes (n = 5) and PD subjects (n = 5) with STN-DBS electrodes performed two tasks: (1) copying letters; and (2) writing any letter other than that appearing on the monitor. The cognitive load of the second task was greater than that of the first.
View Article and Find Full Text PDFSensors (Basel)
November 2015
Department of Microbiology, Faculty of Medicine and St. Anne's Faculty Hospital, Brno 65691, Czech Republic.
Raman spectroscopy has a broad range of applications across numerous scientific fields, including microbiology. Our work here monitors the influence of culture media on the Raman spectra of clinically important microorganisms (Escherichia coli, Staphylococcus aureus, Staphylococcus epidermidis and Candida albicans). Choosing an adequate medium may enhance the reproducibility of the method as well as simplifying the data processing and the evaluation.
View Article and Find Full Text PDFMagn Reson Med
March 2016
Department of Biomedicine, University of Bergen, Bergen, Norway.
Purpose: One of the main challenges in quantitative dynamic contrast-enhanced (DCE) MRI is estimation of the arterial input function (AIF). Usually, the signal from a single artery (ignoring contrast dispersion, partial volume effects and flow artifacts) or a population average of such signals (also ignoring variability between patients) is used.
Methods: Multi-channel blind deconvolution is an alternative approach avoiding most of these problems.
Int J Mol Sci
December 2014
Department of Microbiology, Faculty of Medicine and St. Anne's Faculty Hospital, Brno 65691, Czech Republic.
Colonies of Candida parapsilosis on culture plates were probed directly in situ using Raman spectroscopy for rapid identification of specific strains separated by a given time intervals (up to months apart). To classify the Raman spectra, data analysis was performed using the approach of principal component analysis (PCA). The analysis of the data sets generated during the scans of individual colonies reveals that despite the inhomogeneity of the biological samples unambiguous associations to individual strains (two biofilm-positive and two biofilm-negative) could be made.
View Article and Find Full Text PDFComput Biol Med
August 2015
Department of Simulation and Graphics, University of Magdeburg, Universitätsplatz 2, 39106 Magdeburg, Germany.
This paper presents a system for correcting motion influences in time-dependent 2D contrast-enhanced ultrasound (CEUS) images to assess tissue perfusion characteristics. The system consists of a semi-automatic frame selection method to find images with out-of-plane motion as well as a method for automatic motion compensation. Translational and non-rigid motion compensation is applied by introducing a temporal continuity assumption.
View Article and Find Full Text PDFMagn Reson Imaging
June 2014
Dept. of Biomedicine, Univ. of Bergen, Bergen, Norway; Dept. of Radiology, Haukeland University Hospital, Bergen, Norway.
The present trend in dynamic contrast-enhanced MRI is to increase the number of estimated perfusion parameters using complex pharmacokinetic models. However, less attention is given to the precision analysis of the parameter estimates. In this paper, the distributed capillary adiabatic tissue homogeneity pharmacokinetic model is extended by the bolus arrival time formulated as a free continuous parameter.
View Article and Find Full Text PDFIEEE Trans Ultrason Ferroelectr Freq Control
March 2010
Institute of Scientific Instruments of the Academy of Sciences of the Czech Republic, Brno, Czech Republic.
In this contribution we propose a scheme for a generation of precise displacements through conversion of relative stability of components of a femtosecond laser into the length of a Fabry-Perot cavity. The spacing of mirrors of a Fabry-Perot interferometer represents a mechanical length standard referenced to stable optical frequency of a femtosecond mode-locked laser. With the help of a highly selective optical filter, it is possible to get only a few discrete spectral components.
View Article and Find Full Text PDFScanning
February 2008
Institute of Scientific Instruments of the Academy of Sciences of the Czech Republic, v.v.i., Department of Electron Optics, Brno, Czech Republic.
The new extended Monte Carlo (MC) simulation method for photon transport in S(T)EM back scattered electron (BSE) scintillation detection systems of various shapes is presented in this paper. The method makes use of the random generation of photon emission from a scintillator luminescent centre and describes the trajectory of photons and the efficiency of their transport toward the photocathode of the photomultiplier tube. The paper explains a new algorithm for determining the position of interaction of the photon with the surface of the single crystal scintillator or of the light guide with nearly arbitrary shapes.
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