A PHP Error was encountered

Severity: Warning

Message: fopen(/var/lib/php/sessions/ci_sessiono1d6dgiji0uk4q3d6v7c2qtq1cg4j8ob): Failed to open stream: No space left on device

Filename: drivers/Session_files_driver.php

Line Number: 177

Backtrace:

File: /var/www/html/index.php
Line: 316
Function: require_once

A PHP Error was encountered

Severity: Warning

Message: session_start(): Failed to read session data: user (path: /var/lib/php/sessions)

Filename: Session/Session.php

Line Number: 137

Backtrace:

File: /var/www/html/index.php
Line: 316
Function: require_once

Institute of Physicochemical and Biolog... Publications | LitMetric

83 results match your criteria: "Institute of Physicochemical and Biological Problems in Soil Science[Affiliation]"

Two novel membranes based on collagen and two polyphenols, taxifolin pentaglutarate (TfG5) and a conjugate of taxifolin with glyoxylic acid (DfTf), were prepared. Fourier transform infrared spectroscopy examination confirmed the preservation of the triple helical structure of collagen. A scanning electron microscopy study showed that both materials had a porous structure.

View Article and Find Full Text PDF

Arctic soil microbial communities may shift with increasing temperatures and water availability from climate change. We examined temperature and volumetric liquid water content (VWC) in the upper 80 cm of permafrost-affected soil over 2 years (2018-2019) at the Bayelva monitoring station, Ny Ålesund, Svalbard. We show VWC increases with depth, whereas in situ temperature is more stable vertically, ranging from -5°C to 5 °C seasonally.

View Article and Find Full Text PDF

Climate and land use changes are causing trees line to shift up into mountain meadows. The effect of this vegetation change on the partitioning of soil carbon (C) between the labile particulate organic matter (POM-C) and stable mineral-associated organic matter (MAOM-C) pools is poorly understood. Therefore, we assessed these C pools in a 10 cm topsoil layer along forest-meadow ecotones with different land uses (reserve and pasture) in the Northwest Caucasus of Russia using the size fractionation technique (POM 0.

View Article and Find Full Text PDF

The increasing popularity and recognition of citizen science approaches to monitor soil health have promoted the idea to assess soil microbial decomposition based on a standard litter sample - tea bags. Although tea bag initiatives are expanding across the world, the global datasets remain biased in regard to investigating regions and biomes. This study aimed to expand the tea bag initiative to European Russia, which remains a "white spot" on the tea bag index map.

View Article and Find Full Text PDF

Some organisms in nature have developed the ability to enter a state of suspended metabolism called cryptobiosis when environmental conditions are unfavorable. This state-transition requires execution of a combination of genetic and biochemical pathways that enable the organism to survive for prolonged periods. Recently, nematode individuals have been reanimated from Siberian permafrost after remaining in cryptobiosis.

View Article and Find Full Text PDF

The patterns of change in bioclimatic conditions determine the vegetation cover and soil properties along the altitudinal gradient. Together, these factors control the spatial variability of soil respiration () in mountainous areas. The underlying mechanisms, which are poorly understood, shape the resulting surface CO flux in these ecosystems.

View Article and Find Full Text PDF

Microbial life in 25-m-deep boreholes in ancient permafrost illuminated by metagenomics.

Environ Microbiome

April 2023

Center for Environmental Biotechnology, University of Tennessee, 1416 Circle Drive, Knoxville, TN, 37996-1605, USA.

This study describes the composition and potential metabolic adaptation of microbial communities in northeastern Siberia, a repository of the oldest permafrost in the Northern Hemisphere. Samples of contrasting depth (1.75 to 25.

View Article and Find Full Text PDF

Rising air temperatures caused by global warming affects microbial decomposition rate of soil organic matter (SOM). The temperature sensitivity of SOM decomposition (Q) may depend on SOM quality determined by vegetation type. In this study, we selected a long transect (3.

View Article and Find Full Text PDF

The red raspberry is one of the world's most popular berries. The main direction of its breeding has switched to nutritional quality, and the evaluation of raspberry germplasm for antioxidant content and activity is very important. As berries, raspberry leaves contain valuable bioactive compounds, but the optimal time for their collection is unknown.

View Article and Find Full Text PDF

A model of rhizosphere priming effect under impact of root exudate input into rhizosphere soil was developed as an important process of the plant-soil interaction. The model was based on the concept of nitrogen (N) mining, compensating for the N scarcity in exudates for microbial growth by accelerating SOM mineralisation. In the model, N deficiency for microbial growth is covered ("mined") by the increased SOM mineralisation depending on the C:N ratio of the soil and exudates.

View Article and Find Full Text PDF

Assessment of the effects of transgenic plants on microbiota and soil fertility is an important part of the overall assessment of their biosafety. However, the environmental risk assessment of genetically modified plants has long been focused on the aboveground effects. In this review, we discuss the results of two decades of research on the impact of transgenic plants on the physicochemical properties of soil, its enzyme activities and microbial biomass.

View Article and Find Full Text PDF

Areas covered by seminatural grasslands have been in constant decline for decades in Europe. This trend is particularly strong for mountain territories, where such traditional agricultural practices as cattle grazing are no longer economically feasible. This study was conducted in the subalpine pasture of Cinte Tesino (TN, Italy), where local farmers have applied the following different management strategies: shorter and longer grazing durations during the season and a complete abandonment for the last 15 years.

View Article and Find Full Text PDF

Nitrogen Regulates the Distribution of Antibiotic Resistance Genes in the Soil-Vegetable System.

Front Microbiol

March 2022

Institute of Organic Contaminant Control and Soil Remediation, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China.

The increasing antibiotic resistance genes (ARGs) in fertilizer-amended soils can potentially enter food chains through their transfer in a soil-vegetable system, thus, posing threats to human health. As nitrogen is an essential nutrient in agricultural production, the effect of nitrogen (in the forms NH -N and NO -N) on the distribution of ARGs (, , and ) and a mobile genetic element (MGE; ) in a soil-Chinese cabbage system was investigated. Not all the tested genes could transfer from soil to vegetable.

View Article and Find Full Text PDF

This article describes a study of frozen volcanic deposits collected from volcanoes Tolbachik and Bezymianny on the Kamchatka Peninsula, Russia, and Deception Island volcano, Antarctica. In addition, we studied suprasnow ash layers deposited after the 2007 eruptions of volcanoes Shiveluch and Bezymianny on Kamchatka. The main objectives were to characterize the presence and survivability of thermophilic microorganisms in perennially frozen volcanic deposits.

View Article and Find Full Text PDF

Mineral and Organic Fertilizers Distinctly Affect Fungal Communities in the Crop Rhizosphere.

J Fungi (Basel)

March 2022

Department of Plant Pathology and Emerging Pathogens Institute, University of Florida, Gainesville, FL 32611-0680, USA.

Fungi represent a diverse group of organisms that play an essential role in maintaining soil health and ecosystem functioning. Plant root exudates form nutrient-rich niches that harbor specific fungal communities, or so-called rhizosphere mycobiomes. The long-term application of fertilizers supplies the soil with nutrients that may override the plant-related effects on rhizosphere fungal communities.

View Article and Find Full Text PDF

Characterization of Different Molecular Size Fractions of Glomalin-Related Soil Protein From Forest Soil and Their Interaction With Phenanthrene.

Front Microbiol

February 2022

College of Resources and Environmental Sciences, Institute of Organic Contaminant Control and Soil Remediation, Nanjing Agricultural University, Nanjing, China.

Article Synopsis
  • Glomalin-related soil protein (GRSP), secreted by arbuscular mycorrhizal fungi, plays a significant role in the soil by affecting the bioavailability of polycyclic aromatic hydrocarbons (PAHs), which can accumulate in plant roots.
  • The study analyzed GRSP extracted from soil by dividing it into three molecular weight fractions (<3,000, 3,000-10,000, and >10,000 Da) to investigate their characteristics and how they interact with PAHs.
  • Results indicated that the >10,000 Da fraction of GRSP had a higher binding capacity due to its greater content of phenolic hydroxyl groups and dissolved organic carbon, significantly influencing the fate and toxicity of PA
View Article and Find Full Text PDF

Enhanced transformation capability towards benzo(a)pyrene by Fe(III)-modified manganese oxides.

J Hazard Mater

June 2022

Institute of Organic Contaminant Control and Soil Remediation, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China. Electronic address:

Manganese oxides (Mn oxides) are ubiquitous and may coexist with Fe(III) ions in soil environments. In this study, acid birnessite, alkaline birnessite, cryptomelane, pyrolusite, manganite, and their Fe(III)-modified analogues were synthesized and used for benzo(a)pyrene transformation. Fe-modified Mn oxides show a markedly enhanced transformation capability towards benzo(a)pyrene.

View Article and Find Full Text PDF

The phylloplane is an integrated part of green infrastructure which interacts with plant health. Taxonomic characterization of the phylloplane with the aim to link it to ecosystem functioning under anthropogenic pressure is not sufficient because only active microorganisms drive biochemical processes. Activity of the phylloplane remains largely overlooked.

View Article and Find Full Text PDF

Non-covalent binding interaction between phthalic acid esters and DNA.

Environ Int

March 2022

Institute of Organic Contaminant Control and Soil Remediation, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, PR China. Electronic address:

Article Synopsis
  • Phthalic acid esters (PAEs) negatively affect DNA by disrupting endocrine functions and causing teratogenic and carcinogenic effects, yet the details of their binding mechanisms have been underexplored.
  • A fluorescence titration experiment confirmed that PAEs bind to DNA with varying binding constants, indicating significant interaction, especially with thymines in the DNA minor groove.
  • The binding occurs through hydrogen bonding and van der Waals forces without altering the DNA conformation, suggesting that electrostatic interactions are also crucial in PAEs-DNA binding.
View Article and Find Full Text PDF

Ecological data in Darwin Core: the case of earthworm surveys.

Biodivers Data J

December 2021

VertNet, Bariloche, Argentina VertNet Bariloche Argentina.

Article Synopsis
  • - This dataset focuses on earthworm species diversity, age structure, biomass, density, and seasonal activity, collected from old-growth and young forests in two protected areas in Kaluga Oblast, Russia.
  • - The study provides fresh insights into earthworm communities in European Russia, highlighting their ecological importance.
  • - A new standardization schema based on Darwin Core is proposed for soil invertebrate survey data, aiming to improve future data collection and analysis.
View Article and Find Full Text PDF

The effectiveness of different bioremediation methods (biostimulation, bioaugmentation, the sorption-biological method) for the restoration of soil contaminated with petroleum products in the Russian Subarctic has been studied. The object of the study includes soil contaminated for 20 years with petroleum products. By laboratory experiment, we established five types of microfungi that most intensively decompose petroleum hydrocarbons: st.

View Article and Find Full Text PDF

A gene coding for a novel putative amylase, oligo-1,6-glucosidase from a psychrotrophic bacterium from Siberian permafrost soil was cloned and expressed in . The amino acid sequence of the predicted protein EsOgl and its 3D model displayed several features characteristic for the cold-active enzymes while possessing an unusually high number of proline residues in the loops-a typical feature of thermophilic enzymes. The activity of the purified recombinant protein was tested with -nitrophenyl α-D-glucopyranoside as a substrate.

View Article and Find Full Text PDF

Manure inputs into soil strongly affect soil microbial communities leading to shifts in microbial diversity and activity. It is still not clear whether these effects are caused mainly by the survival of microbes introduced with manure or by activation of the soil-borne microbiome. Here, we investigated how the soil microbiome was changed after the introduction of fresh farmyard cattle manure, and which microorganisms originating from manure survived in soil.

View Article and Find Full Text PDF

In natural, permanently frozen habitats, some organisms may be preserved for hundreds to tens of thousands of years. For example, stems of Antarctic moss were successfully regrown from an over millennium-old sample covered by ice for about 400 years. Likewise, whole campion plants were regenerated from seed tissue preserved in relict 32,000-year-old permafrost, and nematodes were revived from the permafrost of two localities in northeastern Siberia, with source sediments dated over 30,000 years BP.

View Article and Find Full Text PDF

Earthworms are an important soil taxon as ecosystem engineers, providing a variety of crucial ecosystem functions and services. Little is known about their diversity and distribution at large spatial scales, despite the availability of considerable amounts of local-scale data. Earthworm diversity data, obtained from the primary literature or provided directly by authors, were collated with information on site locations, including coordinates, habitat cover, and soil properties.

View Article and Find Full Text PDF