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83 results match your criteria: "Institute of Physicochemical and Biological Problems in Soil Science[Affiliation]"
Int J Mol Sci
November 2024
Institute of Theoretical and Experimental Biophysics, Russian Academy of Sciences, Institutskaya 3, 142290 Pushchino, Russia.
Two novel membranes based on collagen and two polyphenols, taxifolin pentaglutarate (TfG5) and a conjugate of taxifolin with glyoxylic acid (DfTf), were prepared. Fourier transform infrared spectroscopy examination confirmed the preservation of the triple helical structure of collagen. A scanning electron microscopy study showed that both materials had a porous structure.
View Article and Find Full Text PDFSyst Appl Microbiol
November 2024
Department of Microbiology, University of Tennessee, Knoxville, United States.
Arctic soil microbial communities may shift with increasing temperatures and water availability from climate change. We examined temperature and volumetric liquid water content (VWC) in the upper 80 cm of permafrost-affected soil over 2 years (2018-2019) at the Bayelva monitoring station, Ny Ålesund, Svalbard. We show VWC increases with depth, whereas in situ temperature is more stable vertically, ranging from -5°C to 5 °C seasonally.
View Article and Find Full Text PDFPlants (Basel)
April 2024
Terrestrial Ecology Group, Institute of Zoology, University of Cologne, 50674 Cologne, Germany.
Climate and land use changes are causing trees line to shift up into mountain meadows. The effect of this vegetation change on the partitioning of soil carbon (C) between the labile particulate organic matter (POM-C) and stable mineral-associated organic matter (MAOM-C) pools is poorly understood. Therefore, we assessed these C pools in a 10 cm topsoil layer along forest-meadow ecotones with different land uses (reserve and pasture) in the Northwest Caucasus of Russia using the size fractionation technique (POM 0.
View Article and Find Full Text PDFSci Total Environ
June 2024
Agrarian and Technological Institute, RUDN University, Moscow, Russia; University of Göttingen, Göttingen, Germany.
The increasing popularity and recognition of citizen science approaches to monitor soil health have promoted the idea to assess soil microbial decomposition based on a standard litter sample - tea bags. Although tea bag initiatives are expanding across the world, the global datasets remain biased in regard to investigating regions and biomes. This study aimed to expand the tea bag initiative to European Russia, which remains a "white spot" on the tea bag index map.
View Article and Find Full Text PDFSome organisms in nature have developed the ability to enter a state of suspended metabolism called cryptobiosis when environmental conditions are unfavorable. This state-transition requires execution of a combination of genetic and biochemical pathways that enable the organism to survive for prolonged periods. Recently, nematode individuals have been reanimated from Siberian permafrost after remaining in cryptobiosis.
View Article and Find Full Text PDFFront Microbiol
June 2023
Laboratory of Carbon Monitoring in Terrestrial Ecosystems, Institute of Physicochemical and Biological Problems in Soil Science, Pushchino, Russia.
The patterns of change in bioclimatic conditions determine the vegetation cover and soil properties along the altitudinal gradient. Together, these factors control the spatial variability of soil respiration () in mountainous areas. The underlying mechanisms, which are poorly understood, shape the resulting surface CO flux in these ecosystems.
View Article and Find Full Text PDFEnviron Microbiome
April 2023
Center for Environmental Biotechnology, University of Tennessee, 1416 Circle Drive, Knoxville, TN, 37996-1605, USA.
This study describes the composition and potential metabolic adaptation of microbial communities in northeastern Siberia, a repository of the oldest permafrost in the Northern Hemisphere. Samples of contrasting depth (1.75 to 25.
View Article and Find Full Text PDFPlants (Basel)
October 2022
Terrestrial Ecology Group, Institute of Zoology, University of Cologne, 50674 Cologne, Germany.
Rising air temperatures caused by global warming affects microbial decomposition rate of soil organic matter (SOM). The temperature sensitivity of SOM decomposition (Q) may depend on SOM quality determined by vegetation type. In this study, we selected a long transect (3.
View Article and Find Full Text PDFAntioxidants (Basel)
September 2022
Branch of the Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences, Prospekt Nauki 6, 142290 Pushchino, Russia.
The red raspberry is one of the world's most popular berries. The main direction of its breeding has switched to nutritional quality, and the evaluation of raspberry germplasm for antioxidant content and activity is very important. As berries, raspberry leaves contain valuable bioactive compounds, but the optimal time for their collection is unknown.
View Article and Find Full Text PDFPlants (Basel)
October 2022
Institute of Physicochemical and Biological Problems in Soil Science, Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences, Institutskaya 2, 142290 Pushchino, Russia.
A model of rhizosphere priming effect under impact of root exudate input into rhizosphere soil was developed as an important process of the plant-soil interaction. The model was based on the concept of nitrogen (N) mining, compensating for the N scarcity in exudates for microbial growth by accelerating SOM mineralisation. In the model, N deficiency for microbial growth is covered ("mined") by the increased SOM mineralisation depending on the C:N ratio of the soil and exudates.
View Article and Find Full Text PDFPlants (Basel)
September 2022
Branch of the Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry of the Russian Academy of Sciences, Prospekt Nauki 6, 142290 Pushchino, Russia.
Assessment of the effects of transgenic plants on microbiota and soil fertility is an important part of the overall assessment of their biosafety. However, the environmental risk assessment of genetically modified plants has long been focused on the aboveground effects. In this review, we discuss the results of two decades of research on the impact of transgenic plants on the physicochemical properties of soil, its enzyme activities and microbial biomass.
View Article and Find Full Text PDFPlants (Basel)
August 2022
Research Institute on Terrestrial Ecosystems, National Research Council, 05010 Porano, Italy.
Areas covered by seminatural grasslands have been in constant decline for decades in Europe. This trend is particularly strong for mountain territories, where such traditional agricultural practices as cattle grazing are no longer economically feasible. This study was conducted in the subalpine pasture of Cinte Tesino (TN, Italy), where local farmers have applied the following different management strategies: shorter and longer grazing durations during the season and a complete abandonment for the last 15 years.
View Article and Find Full Text PDFFront Microbiol
March 2022
Institute of Organic Contaminant Control and Soil Remediation, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing, China.
The increasing antibiotic resistance genes (ARGs) in fertilizer-amended soils can potentially enter food chains through their transfer in a soil-vegetable system, thus, posing threats to human health. As nitrogen is an essential nutrient in agricultural production, the effect of nitrogen (in the forms NH -N and NO -N) on the distribution of ARGs (, , and ) and a mobile genetic element (MGE; ) in a soil-Chinese cabbage system was investigated. Not all the tested genes could transfer from soil to vegetable.
View Article and Find Full Text PDFAstrobiology
July 2022
Institute of Physicochemical and Biological Problems in Soil Science, Federal Research Center "Pushchino Scientific Center for Biological Research of the Russian Academy of Sciences," Pushchino, Russia.
This article describes a study of frozen volcanic deposits collected from volcanoes Tolbachik and Bezymianny on the Kamchatka Peninsula, Russia, and Deception Island volcano, Antarctica. In addition, we studied suprasnow ash layers deposited after the 2007 eruptions of volcanoes Shiveluch and Bezymianny on Kamchatka. The main objectives were to characterize the presence and survivability of thermophilic microorganisms in perennially frozen volcanic deposits.
View Article and Find Full Text PDFJ Fungi (Basel)
March 2022
Department of Plant Pathology and Emerging Pathogens Institute, University of Florida, Gainesville, FL 32611-0680, USA.
Fungi represent a diverse group of organisms that play an essential role in maintaining soil health and ecosystem functioning. Plant root exudates form nutrient-rich niches that harbor specific fungal communities, or so-called rhizosphere mycobiomes. The long-term application of fertilizers supplies the soil with nutrients that may override the plant-related effects on rhizosphere fungal communities.
View Article and Find Full Text PDFFront Microbiol
February 2022
College of Resources and Environmental Sciences, Institute of Organic Contaminant Control and Soil Remediation, Nanjing Agricultural University, Nanjing, China.
J Hazard Mater
June 2022
Institute of Organic Contaminant Control and Soil Remediation, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, China. Electronic address:
Manganese oxides (Mn oxides) are ubiquitous and may coexist with Fe(III) ions in soil environments. In this study, acid birnessite, alkaline birnessite, cryptomelane, pyrolusite, manganite, and their Fe(III)-modified analogues were synthesized and used for benzo(a)pyrene transformation. Fe-modified Mn oxides show a markedly enhanced transformation capability towards benzo(a)pyrene.
View Article and Find Full Text PDFPlants (Basel)
January 2022
Research Institute on Terrestrial Ecosystems, National Research Council, 05010 Porano, Italy.
The phylloplane is an integrated part of green infrastructure which interacts with plant health. Taxonomic characterization of the phylloplane with the aim to link it to ecosystem functioning under anthropogenic pressure is not sufficient because only active microorganisms drive biochemical processes. Activity of the phylloplane remains largely overlooked.
View Article and Find Full Text PDFEnviron Int
March 2022
Institute of Organic Contaminant Control and Soil Remediation, College of Resources and Environmental Sciences, Nanjing Agricultural University, Nanjing 210095, PR China. Electronic address:
Biodivers Data J
December 2021
VertNet, Bariloche, Argentina VertNet Bariloche Argentina.
Microorganisms
August 2021
Institute of Physicochemical and Biological Problems in Soil Science Russian Academy of Science, 142290 Puschino, Russia.
The effectiveness of different bioremediation methods (biostimulation, bioaugmentation, the sorption-biological method) for the restoration of soil contaminated with petroleum products in the Russian Subarctic has been studied. The object of the study includes soil contaminated for 20 years with petroleum products. By laboratory experiment, we established five types of microfungi that most intensively decompose petroleum hydrocarbons: st.
View Article and Find Full Text PDFBiomolecules
August 2021
Department of Bioengineering, Shemyakin & Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 117997 Moscow, Russia.
A gene coding for a novel putative amylase, oligo-1,6-glucosidase from a psychrotrophic bacterium from Siberian permafrost soil was cloned and expressed in . The amino acid sequence of the predicted protein EsOgl and its 3D model displayed several features characteristic for the cold-active enzymes while possessing an unusually high number of proline residues in the loops-a typical feature of thermophilic enzymes. The activity of the purified recombinant protein was tested with -nitrophenyl α-D-glucopyranoside as a substrate.
View Article and Find Full Text PDFJ Environ Manage
September 2021
Department of Plant Pathology and Emerging Pathogens Institute, University of Florida, Gainesville, FL, 32611-0680, USA.
Manure inputs into soil strongly affect soil microbial communities leading to shifts in microbial diversity and activity. It is still not clear whether these effects are caused mainly by the survival of microbes introduced with manure or by activation of the soil-borne microbiome. Here, we investigated how the soil microbiome was changed after the introduction of fresh farmyard cattle manure, and which microorganisms originating from manure survived in soil.
View Article and Find Full Text PDFCurr Biol
June 2021
Soil Cryology Laboratory, Institute of Physicochemical and Biological Problems in Soil Science, Institutskaya 2, 142290, Pushchino, Russia.
In natural, permanently frozen habitats, some organisms may be preserved for hundreds to tens of thousands of years. For example, stems of Antarctic moss were successfully regrown from an over millennium-old sample covered by ice for about 400 years. Likewise, whole campion plants were regenerated from seed tissue preserved in relict 32,000-year-old permafrost, and nematodes were revived from the permafrost of two localities in northeastern Siberia, with source sediments dated over 30,000 years BP.
View Article and Find Full Text PDFSci Data
May 2021
German Centre for Integrative Biodiversity Research (iDiv) Halle-Jena-Leipzig, Puschstrasse 4, 04103, Leipzig, Germany.
Earthworms are an important soil taxon as ecosystem engineers, providing a variety of crucial ecosystem functions and services. Little is known about their diversity and distribution at large spatial scales, despite the availability of considerable amounts of local-scale data. Earthworm diversity data, obtained from the primary literature or provided directly by authors, were collated with information on site locations, including coordinates, habitat cover, and soil properties.
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