7,919 results match your criteria: "Institute of Medical Microbiology[Affiliation]"

Article Synopsis
  • * A study in Vietnam involving 330 patients compared the BioFire FilmArray Meningitis/Encephalitis (FAME) Panel to traditional diagnostic methods, with FAME showing an 87% agreement rate and detecting 19% of specimens.
  • * While FAME offers rapid pathogen detection, it's not a complete replacement for traditional methods and should be tailored to local disease patterns to improve healthcare outcomes.
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The demand for terrestrial snails as a food source is still on the increase globally, yet this has been overlooked in disease epidemiology and the spread of antimicrobial resistance. This study conducted genomic analyses of twenty strains isolated from live edible snails traded in two hubs. The isolates were subjected to MALDI-TOF MS, antimicrobial resistance testing, whole genome sequencing, and analyses for in-depth characterization.

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A carbapenem-resistant (CRAB) outbreak in an intensive care unit (ICU) was contained by an improved infection-control measure that included a disinfectant policy. In our retrospective cohort study, we describe the epidemiological investigations and infection-control measures during this outbreak. Descriptive analysis was used to summarize patient demographics, neurological diseases, surgical treatment, underlying diseases, infection, and outcomes.

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DiscovEpi: automated whole proteome MHC-I-epitope prediction and visualization.

BMC Bioinformatics

September 2024

Friedrich Loeffler-Institute of Medical Microbiology-Virology, University Medicine Greifswald, 17475, Greifswald, Germany.

Background: Antigen presentation is a central step in initiating and shaping the adaptive immune response. To activate CD8 T cells, pathogen-derived peptides are presented on the cell surface of antigen-presenting cells bound to major histocompatibility complex (MHC) class I molecules. CD8 T cells that recognize these complexes with their T cell receptor are activated and ideally eliminate infected cells.

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Article Synopsis
  • In November 2023, five newborns with fever and suspected human parechovirus (PEV-A) infection were studied, and PEV-A positivity was confirmed through advanced testing methods.
  • Metagenomic sequencing and amplicon-based whole genome sequencing revealed that the infections were caused by PEV-A genotype 3 (PEV-A3), with all analyzed samples showing identical consensus sequences.
  • The study indicated the presence of at least two viral quasispecies and suggested that the cluster of cases was microbiologically related, contributing valuable data for understanding PEV-A3's evolution and pathogenicity.
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Objectives: The study addresses the challenge of cross-infection in dentistry, focusing on improving disinfection protocols for dental hydrocolloid gel materials. This research aimed to incorporate chlorhexidine, natural plant extracts, and green-synthesized silver nanoparticles (AgNPs) into dental alginate to enhance safety and hygiene standards in dental practices.

Methods: Conventional dental alginate served as the control, with experimental groups including alginate modified with 0.

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Tunneling Nanotube-like Structures in .

Cells

September 2024

Laboratório de Ultraestrutura Celular Hertha Meyer, Centro de Pesquisa em Medicina de Precisão, Instituto de Biofísica Carlos Chagas Filho, Universidade Federal do Rio de Janeiro, Rio de Janeiro 21941-902, Brazil.

Article Synopsis
  • The text discusses a protozoan parasite that causes giardiasis, leading to symptoms like abdominal pain and diarrhea, primarily due to its ability to change surface proteins and evade the host's immune response.
  • High-resolution scanning microscopy revealed the formation of tunneling-nanotube-like structures on the parasite's surface, particularly when exposed to antibodies against its surface proteins.
  • These nanotubes play a role in communication, both among the parasites and with host cells, indicating a complex interaction in the gut environment.
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Article Synopsis
  • The text discusses a severe infection caused by a bacteria usually found in the mouths of cats and dogs, which can lead to sepsis, particularly in immunocompromised patients, with a high mortality rate of 10% to 30%.
  • An 81-year-old woman developed sepsis after a dog bite and presented with serious symptoms, including thrombopenia and schistocytes, leading to her admission to the intensive care unit.
  • Despite her recovery through plasmapheresis, antibiotics, and dialysis, she required amputation of her affected fingertip and was diagnosed with a rare case of mitral valve endocarditis, which was effectively treated with antibiotics.
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The human microbiome emerges as a promising reservoir for diagnostic markers and therapeutics. Since host-associated microbiomes at various body sites differ and diseases do not occur in isolation, a comprehensive analysis strategy highlighting the full potential of microbiomes should include diverse specimen types and various diseases. To ensure robust data quality and comparability across specimen types and diseases, we employ standardized protocols to generate sequencing data from 1931 prospectively collected specimens, including from saliva, plaque, skin, throat, eye, and stool, with an average sequencing depth of 5.

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Understanding human, animal, and environmental microbiota is essential for advancing global health and combating antimicrobial resistance (AMR). We investigate the oral and gut microbiota of 48 animal species in captivity, comparing them to those of wildlife animals. Specifically, we characterize the microbiota composition, metabolic pathways, AMR genes, and biosynthetic gene clusters (BGCs) encoding the production of specialized metabolites.

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Molecular characterization and antibiotic resistance of clinical Bacteroides and related genera from a tertiary care center in Türkiye (Turkey).

Anaerobe

December 2024

Department of Medical Microbiology, Faculty of Medicine, Hacettepe University, Ankara, Turkiye; ESCMID Study Group for Anaerobic Infections (ESGAI), Basel, Switzerland. Electronic address:

Objectives: This study was conducted to measure the prevalence of antibiotic resistance, and corresponding resistance genes among Bacteroides and related genera in a tertiary hospital.

Methods: We examined 138 clinical strains of Bacteroides, Phocaeicola and Parabacteroides species isolated between July 2018 and June 2022. Antibiotic susceptibility tests were conducted using agar dilution.

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A host-adapted auxotrophic gut symbiont induces mucosal immunodeficiency.

Science

September 2024

Department of Inflammation and Immunity, Lerner Research Institute, Cleveland Clinic, Cleveland, OH 44195, USA.

Harnessing the microbiome to benefit human health requires an initial step in determining the identity and function of causative microorganisms that affect specific host physiological functions. We show a functional screen of the bacterial microbiota from mice with low intestinal immunoglobulin A (IgA) levels; we identified a Gram-negative bacterium, proposed as , that induces and degrades IgA in the mouse intestine. Mice harboring are susceptible to infections and show poor mucosal repair.

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Colonization with resistant bacteria in hospital employees: an epidemiological surveillance and typing study.

Antimicrob Agents Chemother

November 2024

Division of Infectious Diseases, Infection Prevention and Travel Medicine, Kantonsspital St. Gallen, St. Gallen, Switzerland.

The objective of this study was to determine the prevalence, molecular epidemiology, and risk factors for gut colonization with extended-spectrum β-lactamase-producing Enterobacterales (ESBL-E), carbapenemase-producing Enterobacterales (CPE), and vancomycin-resistant enterococci (VRE) in healthcare workers (HCWs). In September/October 2022, we performed a cross-sectional study among HCW from 14 institutions in Northeastern Switzerland. HCWs reported risk factors for antimicrobial resistance (covering the last 12-24 months) and provided rectal swabs.

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Article Synopsis
  • The QuickMIC system tests how well bacteria respond to antibiotics faster and more accurately than traditional methods, which take a long time and can be complicated.
  • It was tested in four different labs, showing that it works well and consistently, with very few errors.
  • This new method is important because it helps doctors quickly decide what medicine to use in serious infections like sepsis, where time is crucial.
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Aim: Periodontal disease is driven by oral pathogens, including Porphyromonas gingivalis, and the release of inflammatory cytokines. These cytokines (e.g.

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Background: The discrepancy between experimental research and clinical trial outcomes is a persistent challenge in preclinical studies, particularly in stroke research. A possible factor contributing to this issue is the lack of standardization across experimental stroke models, leading to poor reproducibility in multicenter studies. This study addresses this gap by aiming to enhance reproducibility and the efficacy of multicenter studies through the harmonization of protocols and training of involved personnel.

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Protocol for lipid mediator profiling and phenotyping of human M1- and M2-monocyte-derived macrophages during host-pathogen interactions.

STAR Protoc

September 2024

Department of Pharmaceutical/Medicinal Chemistry, Institute of Pharmacy, Friedrich Schiller University Jena, Philosophenweg 14, 07743 Jena, Germany; Jena Center for Soft Matter (JCSM), Friedrich Schiller University Jena, Philosophenweg 7, 07743 Jena, Germany. Electronic address:

Here, we present a protocol for primary, human immune cell isolation and stimulation for lipid mediator profiling. We describe steps for the isolation of monocytes from human leukocyte concentrates via density centrifugation and differentiation/polarization toward M1- or M2-monocyte-derived macrophages (MDMs). We detail stimulation approaches of MDMs with live bacteria or influenza A virus for lipid mediator profiling and sample preparation for subsequent analysis, such as enzyme expression, mRNA analysis, or surface marker determination.

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Antimicrobial Biomaterials Based on Physical and Physicochemical Action.

Adv Healthc Mater

December 2024

Chair of Materials Science (CMS), Otto Schott Institute of Materials Research (OSIM), Friedrich Schiller University Jena, Löbdergraben 32, 07743, Jena, Germany.

Developing effective antimicrobial biomaterials is a relevant and fast-growing field in advanced healthcare materials. Several well-known (e.g.

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The Panton-Valentine leukocidin (PVL) of Staphylococcus aureus is associated with necrotizing infections. After binding to complement 5a receptor (C5aR/CD88) and CD45 it causes cytolysis in polymorphonuclear neutrophils (PMNs) as well as inflammasome activation in monocytes. The objective of this study was to test if (ant)agonists of C5aR and CD45 can attenuate the effect of PVL on PMNs and monocytes.

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In a fragment-based approach using NMR spectroscopy, benzyloxyacetohydroxamic acid-derived inhibitors of the bacterial deacetylase LpxC bearing a substituent to target the uridine diphosphate-binding site of the enzyme were developed. By appending privileged fragments via a suitable linker, potent LpxC inhibitors with promising antibacterial activities could be obtained, like the one-digit nanomolar LpxC inhibitor ()- [ (LpxC C63A) = 9.5 nM; (LpxC): 5.

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Antibiotic Prophylaxis During Allogeneic Stem Cell transplantation-A Comprehensive Single Center Retrospective Analysis.

Transplant Cell Ther

December 2024

Department of Oncology, Hematology, Immuno-Oncology and Rheumatology, University Hospital Bonn, Bonn, Germany; Center for Integrated Oncology (CIO) ABCD, Aachen Bonn Cologne Düsseldorf, Germany. Electronic address:

Article Synopsis
  • A study was conducted to analyze the effects of omitting standard antibiotic prophylaxis during allogeneic hematopoietic stem cell transplantation (allo-HSCT), focusing on survival rates and the development of Graft-versus-Host disease (GvHD).
  • The research compared patient outcomes before and after the suspension of antibiotic prophylaxis, assessing factors such as severe infections, transplant-related mortality, and infections by multiresistant pathogens among 221 patients.
  • The results showed a trend towards better outcomes in the group without antibiotic prophylaxis; however, there were no significant differences found in overall survival or acute GvHD between the two groups.
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Article Synopsis
  • The study examined how resistance to antibiotics affects clinical bacterial isolates during anaerobic growth, focusing on their sensitivity to butyrate, a beneficial gut metabolite.
  • Two main categories were identified: strains with carbapenemase (CARB) and those with porin malfunctions (POR), with POR showing reduced growth efficiency and increased butyrate sensitivity.
  • Differences in gene expression were noted, particularly in POR strains, which initially reacted strongly to butyrate but normalized over time, highlighting the ecological impacts of resistance mechanisms and potential strategies for infection prevention.
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The European Committee on Antimicrobial Susceptibility Testing (EUCAST) specifies the agar depth (4±0.5 mm) when performing antimicrobial susceptibility testing (AST). Since the infrastructure to produce standardized agar may be lacking in settings with limited resources, we wanted to examine to what extent variation in agar depth affects the inhibition zone diameters of quality control (QC) strains and AST of clinical isolates.

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Virologic failure of long-acting rilpivirine/cabotegravir is rare but may result in severely limited treatment options. Known risk factors cannot predict all cases. Therapeutic drug monitoring (TDM) may help identify patients at risk, but reliable thresholds are missing.

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