7,905 results match your criteria: "Institute of Medical Microbiology[Affiliation]"

Article Synopsis
  • Researchers studied intestinal schistosomiasis caused by Schistosoma mansoni in children living along the southern shoreline of Lake Malawi, five years after a disease outbreak, using advanced diagnostic techniques.
  • They utilized various methods including microscopy and real-time PCR on fecal and urine samples to assess infection rates and found that the prevalence of S. mansoni varied greatly based on the diagnostic tool used.
  • The study highlighted that while fecal-egg microscopy had very low sensitivity, the point-of-care test showed moderate sensitivity depending on how results were interpreted, also revealing notable DNA presence of another species, S. haematobium, in the samples.
View Article and Find Full Text PDF

Metabolic and ionic control of T cells in asthma endotypes.

Am J Physiol Cell Physiol

November 2024

Institute of Molecular and Clinical Immunology, Medical Faculty, Otto-von-Guericke University Magdeburg, Magdeburg, Germany.

CD4T cells play a central role in orchestrating the immune response in asthma, with dysregulated ion channel profiles and altered metabolic signatures contributing to disease progression and severity. An important classification of asthma is based on the presence of T-helper cell type 2 (Th2) inflammation, dividing patients into Th2-high and Th2-low endotypes. These distinct endotypes have implications for disease severity, treatment response, and prognosis.

View Article and Find Full Text PDF

Successful therapy of a newborn with Stenotrophomonas maltophilia nosocomial pneumonia with cefiderocol.

Infection

October 2024

Department of Medicine V - Internal Medicine, Infectious Diseases & Infection Control, Justus- Liebig-University, Giessen, Germany.

Article Synopsis
  • - Cefiderocol is a new type of antibiotic designed to treat severe infections caused by multidrug-resistant bacteria, such as sepsis and certain types of pneumonia in adults.
  • - Its use in newborns is limited, with only a few documented cases so far.
  • - The text highlights a successful treatment case where cefiderocol was used to treat a newborn with pneumonia-related sepsis caused by the bacteria Stenotrophomonas maltophilia.
View Article and Find Full Text PDF
Article Synopsis
  • NanoCore is a user-friendly tool designed for genomic surveillance using Nanopore sequencing, enabling quick analysis of pathogen transmission in healthcare settings.* -
  • It calculates and visualizes core-genome multilocus sequence typing distances directly from Nanopore reads and is compatible with Illumina data.* -
  • NanoCore demonstrates efficiency and accuracy in comparing bacterial strains, providing results similar to established methods and can be installed easily as free software.*
View Article and Find Full Text PDF

Complex genetic variation in nearly complete human genomes.

bioRxiv

September 2024

Institute for Medical Biometry and Bioinformatics, Medical Faculty and University Hospital Düsseldorf, Heinrich Heine University, Düsseldorf, Germany.

Article Synopsis
  • * It achieves a high level of completeness, closing 92% of previous assembly gaps and fully assembling complex regions, including 1,852 complex structural variants and 1,246 human centromeres.
  • * The findings lead to significant improvements in genotyping accuracy and enable the detection of over 26,000 structural variants per sample, enhancing the potential for future disease association research.
View Article and Find Full Text PDF

Cardiac Repair after Myocardial Infarction is Controlled by a Complement C5a Receptor 1-Driven Signaling Cascade.

Thromb Haemost

October 2024

Institute for Transplantation Diagnostics and Cell Therapeutics, University Hospital and Medical Faculty, Heinrich Heine University Düsseldorf, Düsseldorf, Germany.

Article Synopsis
  • Cardiac repair is super important after a heart attack to help the heart heal and work better, and scientists are studying a specific receptor called C5aR1.
  • Researchers found that when the C5aR1 receptor is not present, it helps reduce the damage to the heart and improve its function after a heart attack.
  • The study suggests that by blocking the C5aR1 receptor, we might be able to make the heart heal better after a heart attack, which can help save lives.
View Article and Find Full Text PDF

Background: Influenza is the most common vaccine-preventable infection among travelers, affecting approximately one percent of those travelling to subtropical and tropical destinations.

Methods: We analysed demographic, travel-related and clinical information from travelers diagnosed with influenza at our travel clinic between January 2015 and March 2020 and influenza-negative controls.

Results: We included 68 travelers diagnosed with influenza and 207 controls.

View Article and Find Full Text PDF

Carbapenemase-producing (CP-Kp) isolates are a public health concern as they can cause severe hospital-acquired infections that are difficult to treat. It has recently been shown that CP-Kp can take up virulence factors from hypervirulent lineages. In this study, 109 clinical CP-Kp isolates from the University Hospital Cologne were examined for the presence of acquired virulence factors using whole-genome sequencing and phenotypic tests, and results were linked to clinical data.

View Article and Find Full Text PDF
Article Synopsis
  • The study talks about collecting kidney tissue samples from patients to use them for research and understanding diseases better.
  • They found a way to keep these tissues preserved without needing super-cold liquid nitrogen, which makes it easier for doctors to use them in their work.
  • By testing these samples with advanced technology, they hope to identify new ways to help prevent and treat kidney diseases in the future.
View Article and Find Full Text PDF

Background: Inflammatory bowel disease (IBD) is a chronic inflammatory disorder of the gastrointestinal tract, but the molecular mechanisms underlying IBD are incompletely understood. In this study, we explored the role and regulating mechanism of otubain 2 (OTUB2), a deubiquitinating enzyme, in IBD.

Methods: To study the function of OTUB2 in IBD, we generated Otub2 mice and treated them with dextran sulfate sodium (DSS) to induce experimental colitis.

View Article and Find Full Text PDF

Tick-borne febrile illnesses caused by pathogens like spp., spp., spp.

View Article and Find Full Text PDF

The deterioration of fibre-reinforced sprayed concrete was studied in the Oslofjord subsea tunnel (Norway). At sites with intrusion of saline groundwater resulting in biofilm growth, the concrete exhibited significant concrete deterioration and steel fibre corrosion. Using amplicon sequencing and shotgun metagenomics, the microbial taxa and surveyed potential microbial mechanisms of concrete degradation at two sites over five years were identified.

View Article and Find Full Text PDF
Article Synopsis
  • * A study in Vietnam involving 330 patients compared the BioFire FilmArray Meningitis/Encephalitis (FAME) Panel to traditional diagnostic methods, with FAME showing an 87% agreement rate and detecting 19% of specimens.
  • * While FAME offers rapid pathogen detection, it's not a complete replacement for traditional methods and should be tailored to local disease patterns to improve healthcare outcomes.
View Article and Find Full Text PDF

The demand for terrestrial snails as a food source is still on the increase globally, yet this has been overlooked in disease epidemiology and the spread of antimicrobial resistance. This study conducted genomic analyses of twenty strains isolated from live edible snails traded in two hubs. The isolates were subjected to MALDI-TOF MS, antimicrobial resistance testing, whole genome sequencing, and analyses for in-depth characterization.

View Article and Find Full Text PDF

A carbapenem-resistant (CRAB) outbreak in an intensive care unit (ICU) was contained by an improved infection-control measure that included a disinfectant policy. In our retrospective cohort study, we describe the epidemiological investigations and infection-control measures during this outbreak. Descriptive analysis was used to summarize patient demographics, neurological diseases, surgical treatment, underlying diseases, infection, and outcomes.

View Article and Find Full Text PDF

DiscovEpi: automated whole proteome MHC-I-epitope prediction and visualization.

BMC Bioinformatics

September 2024

Friedrich Loeffler-Institute of Medical Microbiology-Virology, University Medicine Greifswald, 17475, Greifswald, Germany.

Background: Antigen presentation is a central step in initiating and shaping the adaptive immune response. To activate CD8 T cells, pathogen-derived peptides are presented on the cell surface of antigen-presenting cells bound to major histocompatibility complex (MHC) class I molecules. CD8 T cells that recognize these complexes with their T cell receptor are activated and ideally eliminate infected cells.

View Article and Find Full Text PDF
Article Synopsis
  • In November 2023, five newborns with fever and suspected human parechovirus (PEV-A) infection were studied, and PEV-A positivity was confirmed through advanced testing methods.
  • Metagenomic sequencing and amplicon-based whole genome sequencing revealed that the infections were caused by PEV-A genotype 3 (PEV-A3), with all analyzed samples showing identical consensus sequences.
  • The study indicated the presence of at least two viral quasispecies and suggested that the cluster of cases was microbiologically related, contributing valuable data for understanding PEV-A3's evolution and pathogenicity.
View Article and Find Full Text PDF

Objectives: The study addresses the challenge of cross-infection in dentistry, focusing on improving disinfection protocols for dental hydrocolloid gel materials. This research aimed to incorporate chlorhexidine, natural plant extracts, and green-synthesized silver nanoparticles (AgNPs) into dental alginate to enhance safety and hygiene standards in dental practices.

Methods: Conventional dental alginate served as the control, with experimental groups including alginate modified with 0.

View Article and Find Full Text PDF

Tunneling Nanotube-like Structures in .

Cells

September 2024

Laboratório de Ultraestrutura Celular Hertha Meyer, Centro de Pesquisa em Medicina de Precisão, Instituto de Biofísica Carlos Chagas Filho, Universidade Federal do Rio de Janeiro, Rio de Janeiro 21941-902, Brazil.

Article Synopsis
  • The text discusses a protozoan parasite that causes giardiasis, leading to symptoms like abdominal pain and diarrhea, primarily due to its ability to change surface proteins and evade the host's immune response.
  • High-resolution scanning microscopy revealed the formation of tunneling-nanotube-like structures on the parasite's surface, particularly when exposed to antibodies against its surface proteins.
  • These nanotubes play a role in communication, both among the parasites and with host cells, indicating a complex interaction in the gut environment.
View Article and Find Full Text PDF
Article Synopsis
  • The text discusses a severe infection caused by a bacteria usually found in the mouths of cats and dogs, which can lead to sepsis, particularly in immunocompromised patients, with a high mortality rate of 10% to 30%.
  • An 81-year-old woman developed sepsis after a dog bite and presented with serious symptoms, including thrombopenia and schistocytes, leading to her admission to the intensive care unit.
  • Despite her recovery through plasmapheresis, antibiotics, and dialysis, she required amputation of her affected fingertip and was diagnosed with a rare case of mitral valve endocarditis, which was effectively treated with antibiotics.
View Article and Find Full Text PDF

The human microbiome emerges as a promising reservoir for diagnostic markers and therapeutics. Since host-associated microbiomes at various body sites differ and diseases do not occur in isolation, a comprehensive analysis strategy highlighting the full potential of microbiomes should include diverse specimen types and various diseases. To ensure robust data quality and comparability across specimen types and diseases, we employ standardized protocols to generate sequencing data from 1931 prospectively collected specimens, including from saliva, plaque, skin, throat, eye, and stool, with an average sequencing depth of 5.

View Article and Find Full Text PDF

Understanding human, animal, and environmental microbiota is essential for advancing global health and combating antimicrobial resistance (AMR). We investigate the oral and gut microbiota of 48 animal species in captivity, comparing them to those of wildlife animals. Specifically, we characterize the microbiota composition, metabolic pathways, AMR genes, and biosynthetic gene clusters (BGCs) encoding the production of specialized metabolites.

View Article and Find Full Text PDF

Molecular characterization and antibiotic resistance of clinical Bacteroides and related genera from a tertiary care center in Türkiye (Turkey).

Anaerobe

December 2024

Department of Medical Microbiology, Faculty of Medicine, Hacettepe University, Ankara, Turkiye; ESCMID Study Group for Anaerobic Infections (ESGAI), Basel, Switzerland. Electronic address:

Objectives: This study was conducted to measure the prevalence of antibiotic resistance, and corresponding resistance genes among Bacteroides and related genera in a tertiary hospital.

Methods: We examined 138 clinical strains of Bacteroides, Phocaeicola and Parabacteroides species isolated between July 2018 and June 2022. Antibiotic susceptibility tests were conducted using agar dilution.

View Article and Find Full Text PDF

A host-adapted auxotrophic gut symbiont induces mucosal immunodeficiency.

Science

September 2024

Department of Inflammation and Immunity, Lerner Research Institute, Cleveland Clinic, Cleveland, OH 44195, USA.

Harnessing the microbiome to benefit human health requires an initial step in determining the identity and function of causative microorganisms that affect specific host physiological functions. We show a functional screen of the bacterial microbiota from mice with low intestinal immunoglobulin A (IgA) levels; we identified a Gram-negative bacterium, proposed as , that induces and degrades IgA in the mouse intestine. Mice harboring are susceptible to infections and show poor mucosal repair.

View Article and Find Full Text PDF