The ligninolytic catalytic network reveals the importance of auxiliary enzymes in lignin biocatalysts.

Lignin degradation by biocatalysts is a key strategy to develop a plant-based sustainable carbon economy and thus alleviate global climate change. This process involves synergy between ligninases and auxiliary enzymes. However, auxiliary enzymes within secretomes, which are composed of thousands of enzymes, remain enigmatic, although several ligninolytic enzymes have been well characterized.

Development of micro-nanostructured film with antibacterial, anticorrosive and thermal conductivity properties on copper surface.

A micro-nano sharkskin like film (Cu-MNS-FA) was synthesized on copper surface through chemical etching followed by formate passivation, and its anticorrosive, antibacterial and thermal conductivity properties were investigated. Results show that after 7 d of exposure to nature, Pseudomonas aeruginosa and Desulfovibrio vulgaris seawater, the charge transfer resistance of Cu-MNS-FA is more than three times higher than that of unmodified copper. In particular, in D.

Comparative metagenomics reveals the metabolic flexibility of coastal prokaryotic microbiomes contributing to lignin degradation.

Coastal wetlands are rich in terrestrial organic carbon. Recent studies suggest that microbial consortia play a role in lignin degradation in coastal wetlands, where lignin turnover rates are likely underestimated. However, the metabolic potentials of these consortia remain elusive.

Continuous monitoring and comparative genetic analysis of attached outbreak species of Ulva prolifera in the Southern Yellow Sea.

With years of green tide outbreaks in the Southern Yellow Sea (SYS) and climate change, early findings over multiple years suggest that the green tide may originate from various pathways. Previous studies have identified attached outbreak species of U. prolifera in the intertidal zone along the SYS coast.

Modeling bacterial interactions uncovers the importance of outliers in the coastal lignin-degrading consortium.

Lignin, as the abundant carbon polymer, is essential for carbon cycle and biorefinery. Microorganisms interact to form communities for lignin biodegradation, yet it is a challenge to understand such complex interactions. Here, we develop a coastal lignin-degrading bacterial consortium (LD), through "top-down" enrichment.

Novel peptides based on sea squirt as biocide enhancers to mitigate biocorrosion of EH36 steel.

Microbiologically influenced corrosion (MIC) affects offshore production activities severely. Although adding biocides is a simple method, it can cause environmental damage over time. Using green biocide enhancers is a viable strategy to reduce the amount of biocides.

Potential Environmental Impacts and Management Strategies for Metal Release during Ocean Alkalinity Enhancement Using Olivine.

Ocean alkalinity enhancement (OAE) based on enhanced weathering of olivine (EWO) is a promising marine carbon dioxide removal (mCDR) technique. Previous research primarily focuses on the toxicological effects of potentially toxic metals (PTMs) released from olivine. In this Perspective, we explore the overlooked impacts of EWO on environmental media in two scenarios: olivine applied to beaches/shallow continental shelves and offshore dispersion by vessels.

Responses of biogenic trace gases to atmospheric deposition and acid-processed atmospheric deposition in the oligotrophic western Pacific Ocean.

Dimethylsulfide (DMS) and very short-lived bromocarbons (VSL) are important biogenic trace gases emitted from oceans that can affect the global climate. Atmospheric deposition (AD) can provide nutrients and trace metals to the ocean, which can enhance primary productivity, but the complex effects of AD on DMS and VSL are still largely unexplored. A deck incubation experiment with aerosol additions was conducted to simulate the effects of acid-processed AD on the production of trace gases, including DMS and four VSL such as bromoform (CHBr), dibromomethane (CHBr), dibromochloromethane (CHBrCl), and bromodichloromethane (CHBrCl), in the oligotrophic western Pacific Ocean (WPO).

To kill or to piggyback: Switching of viral lysis-lysogeny strategies depending on host dynamics.

Viruses wield significant influence over microbial communities and ecosystem function in marine environments. However, the selection of viral life strategies and their impacts on microbial communities remains enigmatic. In this study, we utilized a large-scale macrocosm, established using water samples from a marine coastal region, to enable community-level investigation.

Efficacy, safety, and biomarker analysis of first-line immune checkpoint inhibitors with chemotherapy versus chemotherapy for advanced gastric cancer: a multicenter, retrospective cohort study.

Background: Recent phase III randomized controlled trials have demonstrated that first-line immune checkpoint inhibitors (ICIs) improve prognosis in advanced HER-2-negative gastric cancer patients with programmed death ligand 1 (PD-L1) combined positive score (CPS) higher than 5. However, these findings are not confirmed in real-world settings, and the benefits in PD-L1 CPS < 5 patients remain controversial.

Methods: In this multicenter, retrospective cohort study, data from across thirteen medical centers were analyzed by inverse probability of treatment weighting for matching, alongside univariate and multivariate COX proportional hazard regression models.

A nonlinear creep model of hard structural planes.

Hard structural planes mainly exist in rock slopes and their creep characteristics largely determine slope stability. Traditional models have some shortcomings in describing the creep characteristics of hard structural planes, such as poor adaptability and unclear physical meaning of parameters. In order to overcome these shortcomings, based on the creep failure mechanism of hard structural planes, an element combination model is adopted in the study.

Single-Cell Isolation Chip Integrated with Multicolor Barcode Array for High-Throughput Single-Cell Exosome Profiling in Tissue Samples.

Exosomes, functional biomarkers involved in cancer progression, have gained widespread attention for promoting tumor formation, growth, and metastasis. Current bulk exosome detections in bodily fluids enable cancer functional analysis, but average secretion levels from cell populations, losing parent cell information and ignoring exosome heterogeneity from diverse cell subgroups, necessitating an effective platform for analyzing single-cell exosome functional heterogeneity. Here, a high-throughput platform is presented, capable of efficient single-cell isolation and multi-color exosome phenotype analysis, as well as quantifying trace exosomes secreted by single cells.

Disentangling the role of biotic and abiotic factors in shaping microbial biogeographic patterns in the large spatial scale ocean.

Across large oceanic spatial scales, the mechanisms governing microbial community composition remain poorly understood, particularly regarding the influence of biotic factors. In this study, samples were collected over a 3772.55-km transect in the Western Pacific surface waters, with 16S and 18S ribosomal RNA gene sequencing employed to elucidate the assembly processes and drivers of microbial communities.

OGU: A Toolbox for Better Utilising Organelle Genomic Data.

Organelle genomes serve as crucial datasets for investigating the genetics and evolution of plants and animals, genome diversity, and species identification. To enhance the collection, analysis, and visualisation of such data, we have developed a novel open-source software tool named Organelle Genome Utilities (OGU). The software encompasses three modules designed to streamline the handling of organelle genome data.

Time-dependent corrosion behavior of EH36 steel caused by Pseudomonas aeruginosa based on big data monitoring technology.

Marine microbial corrosion poses a significant threat to the safe service of marine engineering equipment. Previous studies have often failed to thoroughly analyze the continuous and prolonged microbial corrosion process, resulting in an incomplete understanding of microbial corrosion mechanisms involved at various stages and the development of ineffective control strategies. This study employed a corrosion big data online real-time monitoring technique to investigate the time-dependent corrosion behavior of EH36 steel caused by Pseudomonas aeruginosa in aerobic environments over a 30-d incubation period.

Molluscan systematics: historical perspectives and the way ahead.

Mollusca, the second-most diverse animal phylum, is estimated to have over 100,000 living species with great genetic and phenotypic diversity, a rich fossil record, and a considerable evolutionary significance. Early work on molluscan systematics was grounded in morphological and anatomical studies. With the transition from oligo gene Sanger sequencing to cutting-edge genomic sequencing technologies, molecular data has been increasingly utilised, providing abundant information for reconstructing the molluscan phylogenetic tree.

Characteristics and genesis of high-quality metasilicate mineral water in Liaocheng City, Shandong Province.

Drinking natural mineral water often contains minerals and trace elements essential for human beings, such as strontium and silicon. As people's quality of life improves, so do their requirements for drinking water. Therefore, it is crucial to identify and develop high-quality groundwater that is rich in metasilicate and other minerals.

New insights into thallium(I) behaviors at birnessite surfaces: Effects of an organic buffer and goethite.

Understanding the environmental behavior of thallium (Tl) is crucial due to its high toxicity and increasing anthropogenic presence. This study investigated the adsorption and redox behaviors of Tl(I) with acid birnessite (AcBi) in the presence of 1,4-piperazine-diethanesulfonic acid (PIPES) and goethite under diffusion-limited conditions using Donnan reactors in aerobic and anaerobic environments. Our findings indicate that Tl(I) preferentially adsorbs onto AcBi, with capacities 20 to 100 times higher than onto goethite, even when AcBi is partial reduced by PIPES.

Immune Response of Silver Pomfret (Pampus argenteus) CC Chemokine Ligand Gene Family to Photobacterium damselae Subsp. Damselae and Nocardia seriolae Infections.

Chemokines play a crucial role in immune responses by facilitating the migration of cells expressing corresponding chemokine receptors along concentration gradients. Photobacterium damselae subsp. Damselae (PDD) and Nocardia seriolae (NS) are known to induce substantial mortality in silver pomfret populations, yet there exists a dearth of research regarding the immune response of CCLs in PDD- or NS-infected silver pomfret.

The spatiotemporal evolution characteristics and influencing factors of habitat quality in the typical region of the Lunan Economic Belt: a case study of Donggang District, Rizhao.

Habitat quality is a key indicator for evaluating the biodiversity of a region. This study aims to assess the current status and characteristic changes of habitat quality in Donggang District, Rizhao while analyzing the potential factors influencing the quality of the habitat. The study employed the Integrated Valuation of Ecosystem Services and Tradeoffs Habitat Quality (InVEST-HQ) mode to assess the spatiotemporal variations in habitat quality in the Donggang District from 2008 to 2022.

Partially Amorphous Ru-Doped CoSe Nanoparticles with Optimized Intermediates Adsorption for Highly Efficient Sulfur Oxidation Reaction.

The application of thermodynamically more favorable sulfur oxidation reaction (SOR) to replace oxygen evolution reaction (OER) in electrocatalytic water electrolysis is an appealing strategy to achieve low-energy hydrogen production while removing toxic sulfur ions from wastewater. However, the study of SOR catalysts with both activity and stability still faces great challenges. Herein, this study prepares partially amorphous Ru-doped CoSe (pa-Ru-CoSe) nanoparticles for SOR.