1,520 results match your criteria: "Institute of Informatics[Affiliation]"

Manual segmentation of lesions, required for radiotherapy planning and follow-up, is time-consuming and error-prone. Automatic detection and segmentation can assist radiologists in these tasks. This work explores the automated detection and segmentation of brain metastases (BMs) in longitudinal MRIs.

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This dataset comprises information about 1242 lung cancer patients collected by the Medical Oncology Department of the Puerta de Hierro University Hospital of Majadahonda in Madrid, Spain. It includes information about cancer diagnosis and treatment, as well as personal and medical data recorded during anamneses. The dataset could assist in data analysis with the aim of discovering relationships between the applied treatment(s), the evolution of the disease and the associated adverse effects.

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 - a large-scale dataset of 3D medical shapes for computer vision.

Biomed Tech (Berl)

December 2024

Institute for Artificial Intelligence in Medicine (IKIM), University Hospital Essen (AöR), Essen, Germany.

Objectives: The shape is commonly used to describe the objects. State-of-the-art algorithms in medical imaging are predominantly diverging from computer vision, where voxel grids, meshes, point clouds, and implicit surface models are used. This is seen from the growing popularity of ShapeNet (51,300 models) and Princeton ModelNet (127,915 models).

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Alzheimer's disease (AD) is a neurodegenerative disorder. It causes progressive degeneration of the nervous system, affecting the cognitive ability of the human brain. Over the past two decades, neuroimaging data from Magnetic Resonance Imaging (MRI) scans has been increasingly used in the study of brain pathology related to the birth and growth of AD.

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Autism spectrum disorder (ASD) has a significant impact on a person's social, emotional, and communication functioning. According to research, individualized instruction can significantly improve these deficits. One of the most successful methods of achieving this outcome is by gaming platforms that provide serious games (SGs).

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The role of sonic hedgehog signaling in the oropharyngeal epithelium during jaw development.

Congenit Anom (Kyoto)

December 2024

Department of Molecular Craniofacial Embryology and Oral Histology, Graduate School of Medical and Dental Sciences, Tokyo Medical and Dental University (TMDU), Tokyo, Japan.

Sonic hedgehog (Shh) is expressed in the oropharyngeal epithelium, including the frontonasal ectodermal zone (FEZ), which is defined as the boundary between Shh and Fgf8 expression domains in the frontonasal epithelium. To investigate the role of SHH signaling from the oropharyngeal epithelium, we generated mice in which Shh expression is specifically deleted in the oropharyngeal epithelium (Isl1-Cre; Shh). In the mutant mouse, Shh expression was excised in the oropharyngeal epithelium as well as FEZ and ventral forebrain, consistent with the expression pattern of Isl1.

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Introduction: Modification of natural enzymes to introduce new properties and enhance existing ones is a central challenge in bioengineering. This study is focused on the development of Taq polymerase mutants that show enhanced reverse transcriptase (RTase) activity while retaining other desirable properties such as fidelity, 5'- 3' exonuclease activity, effective deoxyuracyl incorporation, and tolerance to locked nucleic acid (LNA)-containing substrates. Our objective was to use AI-driven rational design combined with multiparametric wet-lab analysis to identify and validate Taq polymerase mutants with an optimal combination of these properties.

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Optimizing sequence data analysis using convolution neural network for the prediction of CNV bait positions.

BMC Bioinformatics

December 2024

Albert Szent-Györgyi Health Centre, University of Szeged, Korányi fasor 14-15, Szeged, H-6725, Csongrád-Csanád, Hungary.

Background: Accurate prediction of copy number variations (CNVs) from targeted capture next-generation sequencing (NGS) data relies on effective normalization of read coverage profiles. The normalization process is particularly challenging due to hidden systemic biases such as GC bias, which can significantly affect the sensitivity and specificity of CNV detection. In many cases, the kit manifests provide only the genome coordinates of the targeted regions, and the exact bait design of the oligo capture baits is not available.

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Unlabelled: Early diagnosis of Alzheimer's disease (AD) and mild cognitive impairment (MCI) is crucial to prevent their progression. In this study, we proposed the analysis of magnetic resonance imaging (MRI) based on features including; hippocampus (HC) area size, HC grayscale statistics and texture features (mean, standard deviation, skewness, kurtosis, contrast, correlation, energy, homogeneity, entropy), lateral ventricle (LV) area size, gray matter area size, white matter area size, cerebrospinal fluid area size, patient age, weight, and cognitive score. Five machine learning classifiers; K-nearest neighborhood (KNN), support vector machine (SVM), random forest (RF), decision tree (DT), and multi-layer perception (MLP) were used to distinguish between groups: cognitively normal (CN) vs AD, early MCI (EMCI) vs late MCI (LMCI), CN vs EMCI, CN vs LMCI, AD vs EMCI, and AD vs LMCI.

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Digital innovation can significantly enhance public health services, environmental sustainability, and social welfare. To this end, the European Digital Innovation Hub (EDIH) initiative was funded by the European Commission and national governments aiming to facilitate the digital transformation on various domains (including health) via the setup of relevant ecosystems consisting of academic institutions, research centres, start-ups, small and medium-sized enterprises, larger companies, public organizations, technology transfer offices, innovation clusters, and financial institutions. The ongoing goal of the EDIHs initiative is to bridge the gap between high-tech research taking place in universities and research centres and its deployment in real-world conditions by fostering innovation ecosystems.

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Cyto-Safe: A Machine Learning Tool for Early Identification of Cytotoxic Compounds in Drug Discovery.

J Chem Inf Model

December 2024

Laboratory for Molecular Modeling and Drug Design (LabMol), Faculdade de Farmácia, Universidade Federal de Goiás, Goiânia, Goiás 74605-220, Brazil.

Cytotoxicity is essential in drug discovery, enabling early evaluation of toxic compounds during screenings to minimize toxicological risks. assays support high-throughput screening, allowing for efficient detection of toxic substances while considerably reducing the need for animal testing. Additionally, AI-based Quantitative Structure-Activity Relationship (AI-QSAR) models enhance early stage predictions by assessing the cytotoxic potential of molecular structures, which helps prioritize low-risk compounds for further validation.

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Validation of a Wearable Sensor Prototype for Measuring Heart Rate to Prescribe Physical Activity: Cross-Sectional Exploratory Study.

JMIR Biomed Eng

December 2024

Department of Physical Therapy, Universidade Federal de Ciências da Saúde de Porto Alegre - UFCSPA, Porto Alegre, Brazil.

Background: Wearable sensors are rapidly evolving, particularly in health care, due to their ability to facilitate continuous or on-demand physiological monitoring.

Objective: This study aimed to design and validate a wearable sensor prototype incorporating photoplethysmography (PPG) and long-range wide area network technology for heart rate (HR) measurement during a functional test.

Methods: We conducted a transversal exploratory study involving 20 healthy participants aged between 20 and 30 years without contraindications for physical exercise.

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The development of state-of-the-art algorithms for computer visualization has led to a growing interest in applying deep learning (DL) techniques to the field of medical imaging. DL-based algorithms have been extensively utilized in various aspects of cardiovascular imaging, and one notable area of focus is single-photon emission computed tomography (SPECT) myocardial perfusion imaging (MPI), which is regarded as the gold standard for non-invasive diagnosis of myocardial ischemia. However, due to the complex decision-making process of DL based on convolutional neural networks (CNNs), the explainability of DL results has become a significant area of research, particularly in the field of medical imaging.

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Photoacoustic imaging (PAI) can evaluate lymphatic vessels with a high resolution (0.2 mm) compared with other methods. LUB0, a new PAI device that is smaller than the PAI-05 used since 2020 (both from Luxonus, Inc.

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Article Synopsis
  • Water splitting through photoelectrochemical (PEC) cells is a viable way to produce hydrogen fuel using solar energy.
  • Nanostructured metal oxides are highlighted as superior materials for photoanodes because of their stability, large surface area, and suitable band gap energies.
  • The review discusses advancements in metal oxide photoanodes, their synthesis and modification, and suggests incorporating machine learning to enhance hydrogen production efficiency and sustainability.
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Article Synopsis
  • A new Slovak speech database called EWA-DB was developed for research focused on detecting neurodegenerative diseases through speech analysis.
  • The database includes recordings from 1649 speakers, including those with Alzheimer's disease, mild cognitive impairment, Parkinson's disease, and healthy individuals, performing various speech tasks.
  • The article outlines the creation process of EWA-DB, detailing language task selection, recruitment of participants, and recording methods, with potential applications in predicting diagnoses based on speech features.
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Synthetic ECG signals generation: A scoping review.

Comput Biol Med

January 2025

Institute of Digital Technologies for Personalized Healthcare MeDiTech, Department of Innovative Technologies, University of Applied Sciences and Arts of Southern Switzerland, Via la Santa 1, Lugano, 6900, Switzerland.

The scientific community has recently shown increasing interest in generating synthetic ECG data. In particular, synthetic ECG signals can be beneficial for understanding cardiac electrical activity, developing large and heterogeneous unbiased datasets, and anonymizing data to favour knowledge sharing and open science. In the present scoping review, various methodologies to generate synthetic ECG data have been thoroughly analysed, highlighting their limitations and possibilities.

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Article Synopsis
  • - The paper examines digital tools for managing health services in Brazil, emphasizing the importance of certified software features.
  • - It discusses how these tools combine operational, financial, and clinical functionalities, which can improve efficiency and patient care.
  • - Key features highlighted include interoperability, compliance management, and data-driven decision support, while stressing the need for ongoing innovation and integration for a greater impact.
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Mobile Accelerometer Applications in Core Muscle Rehabilitation and Pre-Operative Assessment.

Sensors (Basel)

November 2024

Department of Neurology, Faculty of Medicine in Hradec Králové, Charles University in Prague, 500 05 Hradec Králové, Czech Republic.

Article Synopsis
  • * The study explores the use of mobile accelerometers to assess the symmetry of rehabilitation exercises, analyzing data from 1280 tests across a diverse age group of 16 individuals.
  • * Utilizing advanced machine learning techniques, the research achieved a high accuracy rate of 90.6% in identifying motion patterns during physical activities, indicating effective monitoring can lead to better surgical recovery and improved patient care.
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Based on employees' online reviews, this article analyzes the dimensions of job demand for new-generation employees, using a combination model of Latent Dirichlet Allocation, decision-making trials and evaluation laboratory, interpretative structural modeling, and cross-impact matrix multiplication (LDA-DEMATEL-ISM-MICMAC). The results show that job demand is composed of 10 dimensions, and there is significant interdependence between the dimensions. Changing one dimension will quickly affect the other dimensions.

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In recent years, there has been a notably increased interest in the study of multivariate interactions and emergent higher-order dependencies. This is particularly evident in the context of identifying synergistic sets, which are defined as combinations of elements whose joint interactions result in the emergence of information that is not present in any individual subset of those elements. The scalability of frameworks such as partial information decomposition (PID) and those based on multivariate extensions of mutual information, such as O-information, is limited by combinational explosion in the number of sets that must be assessed.

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Article Synopsis
  • This study investigates how tumor proliferation and immune response patterns affect survival in breast cancer patients, focusing on ER+HER2- and triple-negative types.
  • Using advanced digital image analysis on biopsy samples, researchers quantified specific markers to identify factors that could predict breast cancer-specific survival (BCSS).
  • Results showed that certain immune cell densities and tumor growth patterns significantly influenced BCSS, suggesting potential for personalized treatment strategies based on these biomarkers.
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Catalytic enhancement in the performance of the microscopic two-stroke heat engine.

Phys Rev E

October 2024

International Centre for Theory of Quantum Technologies, University of Gdansk, Wita Stwosza 63, 80-308 Gdansk, Poland.

We consider a model of heat engine operating in the microscopic regime: the two-stroke engine. It produces work and exchanges heat in two discrete strokes that are separated in time. The working body of the engine consists of two d-level systems initialized in thermal states at two distinct temperatures.

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