110 results match your criteria: "Institute of Food and Agricultural Sciences (IFAS)[Affiliation]"

Integrated Transcriptome and Metabolome Analysis Reveals Insights into Flavone and Flavonol Biosynthesis in Salicylic Acid-Induced Huanglongbing Tolerance.

J Agric Food Chem

January 2025

Citrus Research and Education Center, Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences (IFAS), University of Florida, Lake Alfred, Florida 32611, United States.

Salicylic acid (SA) exhibits positive effects against Huanglongbing (HLB), but how SA affects citrus resistance to HLB is currently unknown. This study conducted integrated transcriptome and metabolome analyses on SA-treated (HLB-sensitive) and (HLB-tolerant). The results indicated that the syntheses of flavones and flavonols were induced by SA, while the expression levels of associated genes and the contents of corresponding metabolites varied significantly between the two species after SA treatment or HLB infection.

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Microbial community of cultivated and uncultivated citrus rhizosphere microbiota in Brazil.

Sci Data

November 2024

Instituto Agronômico (IAC)/ Centro de Citricultura Sylvio Moreira (CCSM), 13492-442, Cordeirópolis, SP, Brazil.

The rhizosphere microbiome is known to contain beneficial microorganisms that promote plant growth and increase tolerance to abiotic and biotic stresses. Understanding citrus microbiome diversity and the percentage of diversity that can be recovered in the laboratory is essential for developing innovative approaches to improve plant health and promote sustainable agricultural practices. However, information about the citrus root microbiome, especially in the context of exploring commercial citrus growing areas to identify beneficial plant growth-promoting rhizobacteria (PGPR), is scarce.

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Seasonal effects on multiparous dairy cow behavior in early lactation.

JDS Commun

September 2024

Department of Animal Sciences, University of Florida, Gainesville, FL 32608.

Controlled studies have shown that heat stress abatement positively influences health, productivity, behavior, and reproductive performance of dairy cows during all stages of the lactation cycle. Based on previous findings, the present study focused on a better understanding of how seasonal changes affect the behavior of multiparous lactating dairy cows kept in typical free-stall housing with the objective to aid in the management of lactating cows exposed to variable environmental conditions. Automated monitoring devices (Nedap, the Netherlands) were used to assess behavioral activity of mature Holstein dairy cows during the "hot season" (HS; n = 19; July, August, and September) and the "cool season" (CS; n = 15; December, January, and February) under normal management conditions.

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Article Synopsis
  • Phytophthora is a hemibiotrophic oomycete that causes root rot in over 5,000 plant species, impacting ecosystems and agriculture.
  • A study sequenced the genomes of two distinct isolates from California avocado orchards, revealing complex genomes with 21,111-21,402 genes and differences in virulence related to secretome and effectors.
  • The research highlights common infection strategies and host-specific adaptations of the pathogen, which could help identify key genetic factors influencing plant resistance or susceptibility.
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Global citrus root microbiota unravels assembly cues and core members.

Front Microbiol

July 2024

Citrus Research and Education Center, Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences (IFAS), University of Florida, Lake Alfred, FL, United States.

Introduction: Citrus is one of the most important fruit crops worldwide, and the root-associated microbiota can have a profound impact on tree health and growth.

Methods: In a collaborative effort, the International Citrus Microbiome Consortium investigated the global citrus root microbiota with samples collected from nine citrus-producing countries across six continents. We analyzed 16S rDNA and ITS2 amplicon sequencing data to identify predominant prokaryotic and fungal taxa in citrus root samples.

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Citrus is commercially propagated via grafting, which ensures trees have consistent fruit traits combined with favorable traits from the rootstock such as soil adaptability, vigor, and resistance to soil pathogens. Graft incompatibility can occur when the scion and rootstock are not able to form a permanent, healthy union. Understanding and preventing graft incompatibility is of great importance in the breeding of new fruit cultivars and in the choice of scion and rootstock by growers.

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Sustainable seedling pots: Development and characterisation of banana waste and natural fibre-reinforced composites for horticultural applications.

Int J Biol Macromol

June 2024

Agro-Processing & Technology Division, CSIR-National Institute for Interdisciplinary Science and Technology (NIIST), Trivandrum, Kerala, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, India. Electronic address:

Plastic pots used in horticultural nurseries generate substantial waste, causing environmental pollution. This study aimed to develop biodegradable composites from banana pseudo-stem reinforced with agricultural residues like pineapple leaves, taro and water hyacinth as eco-friendly substitutes. The aim of this study is to develop optimised banana biocomposite formulations with suitable reinforcements that balance mechanical durability, biodegradation, and seedling growth promotion properties to serve as viable eco-friendly alternatives to plastic seedling pots.

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Article Synopsis
  • Citrus fruits are vital for nutrition but are threatened by diseases like citrus canker, especially in countries like Pakistan, prompting this study into defense mechanisms involving specific genes related to salicylic acid.
  • The research includes a genome-wide analysis to explore the evolutionary patterns of these genes in different citrus cultivars, identifying key structural domains and conserved motifs linked to disease resistance.
  • Findings reveal how Xac infection affects gene expression in different citrus varieties, highlighting the importance of genetic and physiological traits in developing resistance against bacterial canker.
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Generation of transgene-free canker-resistant cv. Hamlin in the T0 generation through Cas12a/CBE co-editing.

Front Plant Sci

March 2024

Citrus Research and Education Center, Department of Microbiology and Cell Science, Institute of Food and Agricultural Sciences (IFAS), University of Florida, Lake Alfred, FL, United States.

Article Synopsis
  • Citrus canker disease, caused by the bacteria subsp. citri (Xcc), impacts citrus production by activating canker susceptibility genes through effector proteins like PthA4.
  • The Cas12a/CBE co-editing method was successfully used on the heterozygous Hamlin citrus cultivar to create edited plants resistant to canker, resulting in a higher mutation efficiency of 5.2% compared to previous studies on pummelo.
  • A total of 77 plantlets were produced, including 4 transgene-free lines with valuable biallelic or homozygous mutations in the canker susceptibility gene, demonstrating potential for improved disease resistance in commercial citrus farming.
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Cry1Ba1-mediated toxicity of transgenic and to the Asian citrus psyllid .

Front Insect Sci

April 2023

Entomology and Nematology Department, Institute of Food and Agricultural Sciences (IFAS), University of Florida, Gainesville, FL, United States.

Article Synopsis
  • The Asian citrus psyllid spreads a bacterial agent causing citrus greening disease, which negatively affects global citrus production.
  • Researchers explored using a specific bacterial protein, Cry1Ba1, in transgenic citrus plants as a sustainable alternative to chemical insecticides.
  • They successfully transformed several citrus varieties with Cry1Ba1, showing that these plants can reduce psyllid survival and damage, suggesting a promising management strategy against citrus greening disease.
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The image-based detection and classification of plant diseases has become increasingly important to the development of precision agriculture. We consider the case of tomato, a high-value crop supporting the livelihoods of many farmers around the world. Many biotic and abiotic plant health issues impede the efficient production of this crop, and laboratory-based diagnostics are inaccessible in many remote regions.

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Encapsulated lignin-based slow-release manganese fertilizer with reduced cadmium accumulation in rice (Oryza sativa L.).

Int J Biol Macromol

March 2024

College of Materials Science and Engineering, Central South University of Forestry and Technology, Changsha 410004, China; Ministry of Forestry Bioethanol Research Center, Central South University of Forestry and Technology, Changsha 410004, China; Hunan International Joint Laboratory of Woody Biomass Conversion, Central South University of Forestry and Technology, Changsha 410004, China.

As an essential trace element for plant growth and development, manganese plays a crucial role in the uptake of the heavy metal cadmium by rice (Oryza sativa L.). In this study, we developed a novel slow-release manganese fertilizer named Mn@LNS-EL.

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Extra virgin olive oil (EVOO) is thought to contribute to neuroprotection and, thus, may influence pain symptoms experienced by adults with demyelination-related trigeminal neuralgia (TN). This study aimed to determine the feasibility of daily intake of EVOO and its potential to alleviate facial pain of TN. Adults, self-reporting as female and affected by TN, were enrolled in a 16-week nonblinded, parallel study.

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Identification of ethyl vanillin in strawberry (Fragaria × ananassa) using a targeted metabolomics strategy: From artificial to natural.

Food Chem X

December 2023

Citrus Research & Education Center, Food Science and Huamn Nutrition Department, University of Florida, Lake Alfred, Florida 33850, United States.

Improving flavor can be an important goal of strawberry through breeding that is enhanced through the accurate identification and quantification of flavor compounds. Herein, a targeted metabolomics strategy was developed using liquid-liquid extraction, an in-house standard database, and GC-MS/MS analysis. The database consisted of key food odorants (KFOs), artificial flavor compounds (AFCs) and volatiles.

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Article Synopsis
  • - Rice is a crucial cereal for food and suffers from abiotic stress, which negatively impacts its quality and yield, emphasizing the need for improved genetic breeding strategies.
  • - The research identified 16 genes related to carotenoid cleavage oxygenases, categorized based on their sequences, with specific motifs and stress-related elements hinting at their roles in stress response and plant development.
  • - MicroRNAs regulate these genes, with RNA sequencing showing that certain genes are specifically up-regulated during salt stress and at the inflorescence growth stage, suggesting potential targets for breeding stress-resistant rice.
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When examining gastrointestinal tolerance to nondigestible carbohydrates, a weekly vs. daily symptoms questionnaire may lessen participant burden. This secondary analysis examined the reliability and validity of the Gastrointestinal Symptom Rating Scale (GSRS) in healthy adults.

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Editorial: New developments in Agrobacterium Mediated Transformation of tree fruit crops, volume II.

Front Plant Sci

July 2023

Biotechnology Laboratory, La Platina Station, Instituto de Investigaciones Agropecuarias, Santiago, Chile.

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Selective Depolymerization of Lignin Towards Isolated Phenolic Acids Under Mild Conditions.

ChemSusChem

October 2023

School of Chemical & Biomolecular Engineering Renewable Bioproduct Institute, Georgia Institute of Technology, Atlanta, GA 30318, USA.

Article Synopsis
  • - The transformation of lignin into valuable phenolic acids (PAs) is challenging due to its complex structure and harsh traditional reaction methods that yield low outputs (below 5 wt.%).
  • - This study presents a new method using a low-cost graphene oxide-urea hydrogen peroxide (GO-UHP) catalyst to achieve high yields of PAs (up to 20 wt.% from lignin) at mild temperatures (<120 °C) with a total lignin conversion yield of 95%.
  • - Mechanistic insights reveal that pre-acetylation of lignin enables the selective creation of aromatic aldehydes, which are then efficiently converted to PAs, minimizing unwanted side reactions and maximizing the utility of lignin for biochem
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Background And Objectives: The aims of this study were to determine the extent to which hematopoietic cell transplantation (HCT) survivors adhere to the American Cancer Society recommendations for weekly physical activity and identify potential demographic and transplant characteristics associated with the lack of compliance.

Methods: This cross-sectional study included adults who had undergone HCT and were at least 1 year post transplantation. Physical activity was assessed using the screening tool of the Block 2014.

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Wood-derived bio-coating materials incorporating hydrophobic lignin and hierarchically porous biochar for high-efficiency coating slow-release fertilizers.

Int J Biol Macromol

July 2023

College of Materials Science and Engineering, Central South University of Forestry and Technology, Changsha 410004, China; Ministry of Forestry Bioethanol Research Center, Central South University of Forestry and Technology, Changsha 410004, China; Hunan International Joint Laboratory of Woody Biomass Conversion, Central South University of Forestry and Technology, Changsha 410004, China.

Coating slow-release fertilizers (CSRFs) have gained significant attention for their potential to improve nutrient utilization efficiency and prevent environmental pollution through mitigating soil and water contamination. This study developed a novel wood waste-derived composition as a bio-coating material for urea slow-release by integrating modified lignin (PCL) and activated biochar (ABC). PCL was prepared by grafting palmitoyl chloride (PC) with hydrophobic groups to the lignin via an esterification reaction.

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Unraveling the mystery of canopy dieback caused by citrus disease Huanglongbing and its link to hypoxia stress.

Front Plant Sci

April 2023

Horticultural Sciences Department, Citrus Research and Education Center, Institute of Food and Agricultural Sciences (IFAS), University of Florida, Lake Alfred, FL, United States.

Devastating citrus disease Huanglongbing (HLB) is without existing cures. Herein, we present results demonstrating the possible mechanisms (hypoxia stress) behind HLB-triggered shoot dieback by comparing the transcriptomes, hormone profiles, and key enzyme activities in buds of severely and mildly symptomatic 'Hamlin' sweet orange (). Within six months (October - May) in field conditions, severe trees had 23% bud dieback, greater than mild trees (11%), with a concomitant reduction in canopy density.

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Laboratory evaluation of the life history of hibiscus mealybug, Nipaecocus viridis (Hemiptera: Pseudococcidae), on selected citrus and potential non-citrus hosts in Florida.

J Econ Entomol

June 2023

Department of Entomology and Nematology, Citrus Research and Education Center, University of Florida, Institute of Food and Agricultural Sciences (IFAS), 700 Experimental Station Road, Lake Alfred, FL 33850, USA.

Nipaecoccus viridis (Newstead) (Hemiptera: Pseudococcidae) is an emerging invasive pest of citrus. There is no information on the life history of N. viridis in relation to citrus cultivars produced in Florida.

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Conserving Diversity: From Vavilov's Early Explorations to Genebanks around the World.

Plants (Basel)

February 2023

USDA-ARS National Germplasm Repository for Citrus and Dates, 1060 Martin Luther King Blvd., Riverside, CA 92507, USA.

Citrus is among the most economically important fruit crops. Its vast species diversity and global production was observed by N.I.

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Transcription activator-like effectors are key virulence factors of . They are secreted into host plant cells and mimic transcription factors inducing the expression of host susceptibility (S) genes. In citrus, is a direct target of PthA4, the primary effector associated with citrus canker symptoms.

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