39 results match your criteria: "Institute for Systems Analysis and Computer Science "A. Ruberti" (IASI)[Affiliation]"

Natural killer (NK) cells and dendritic cells (DCs) are critical mediators of anti-cancer immune responses. In addition to their individual roles, NK cells and DCs are involved in intercellular crosstalk which is essential for the initiation and coordination of adaptive immunity against cancer. However, NK cell and DC activity is often compromised in the tumor microenvironment (TME).

View Article and Find Full Text PDF

Metabolic disorders such as insulin resistance and type 2 diabetes are associated with brain dysfunction and cognitive deficits, although the underpinning molecular mechanisms remain elusive. Epigenetic factors, such as non-coding RNAs, have been reported to mediate the molecular effects of nutrient-related signals. Here, we investigated the changes of miRNA expression profile in the hippocampus of a well-established experimental model of metabolic disease induced by high fat diet (HFD).

View Article and Find Full Text PDF
Article Synopsis
  • * This study focused on identifying circulating microRNAs, specifically miR-155-5p, in obese patients to determine their risk of developing DM2, using a network-based analysis of expression data.
  • * Findings suggest that miR-155-5p, along with levels of IL-8, Leptin, and RAGE, could serve as effective indicators for identifying obese individuals at higher risk for DM2, making it a potential biomarker for early screening.
View Article and Find Full Text PDF

Background: Prostate cancer (PCa) is the most diagnosed cancer in men, with an increasing need to integrate noninvasive imaging and circulating microRNAs beyond prostate-specific antigen for screening and early detection.

Objective: To validate magnetic resonance imaging (MRI) biomarkers and circulating microRNAs as triage tests for patients directed to prostate biopsy, and to test different diagnostic pathways to compare their performance on patients' outcome, in terms of unnecessary biopsy avoidance.

Design, Setting, And Participants: A prospective single-center cohort study, enrolling patients with PCa suspicion who underwent MRI, MRI-directed fusion biopsy (MRDB), and circulating microRNAs, was conducted.

View Article and Find Full Text PDF

Background: The ability to increase their degree of pigmentation is an adaptive response that confers pigmentable melanoma cells higher resistance to BRAF inhibitors (BRAFi) compared to non-pigmentable melanoma cells.

Methods: Here, we compared the miRNome and the transcriptome profile of pigmentable 501Mel and SK-Mel-5 melanoma cells vs. non-pigmentable A375 melanoma cells, following treatment with the BRAFi vemurafenib (vem).

View Article and Find Full Text PDF

Epithelial-mesenchymal transition (EMT) is a complex and pivotal process involved in organogenesis and is related to several pathological processes, including cancer and fibrosis. During heart development, EMT mediates the conversion of epicardial cells into vascular smooth muscle cells and cardiac interstitial fibroblasts. Here, we show that the oncogenic transcription factor EB (TFEB) is a key regulator of EMT in epicardial cells and that its genetic overexpression in mouse epicardium is lethal due to heart defects linked to impaired EMT.

View Article and Find Full Text PDF

Repurposing Histaminergic Drugs in Multiple Sclerosis.

Int J Mol Sci

June 2022

IRCCS Santa Lucia Foundation, Preclinical Neuroscience, Via del Fosso di Fiorano 65, 00143 Rome, Italy.

Multiple sclerosis is an autoimmune disease with a strong neuroinflammatory component that contributes to severe demyelination, neurodegeneration and lesions formation in white and grey matter of the spinal cord and brain. Increasing attention is being paid to the signaling of the biogenic amine histamine in the context of several pathological conditions. In multiple sclerosis, histamine regulates the differentiation of oligodendrocyte precursors, reduces demyelination, and improves the remyelination process.

View Article and Find Full Text PDF

The insulin signaling pathway controls cell growth and metabolism, thus its deregulation is associated with both cancer and diabetes. Phosphatidylinositol 3-kinase (PI3K) contributes to the cascade of phosphorylation events occurring in the insulin pathway by activating the protein kinase B (PKB/AKT), which phosphorylates several substrates, including those involved in glucose uptake and storage. PI3K inactivating mutations are associated with insulin resistance while activating mutations are identified in human cancers.

View Article and Find Full Text PDF
Article Synopsis
  • - Nutritional habits significantly influence the health of the gastrointestinal (GI) tract and can affect the progression of GI disorders and cancers, making it crucial to adopt specific nutritional strategies for prevention and management.
  • - The nutritional status of patients with GI cancer plays a key role in their prognosis, quality of life, and ability to tolerate chemotherapy, with malnutrition being a common issue that can develop into cachexia.
  • - Clinical studies highlight the need for specialized nutritional counseling and interventions early in treatment to optimize nutrient delivery, prevent weight loss, and improve overall treatment outcomes, including exploring new methods linking nutrition, epigenetics, and metabolism.
View Article and Find Full Text PDF

SARS-CoV-2 Nsp13 encodes for an HLA-E-stabilizing peptide that abrogates inhibition of NKG2A-expressing NK cells.

Cell Rep

March 2022

Center for Infectious Medicine, Department of Medicine Huddinge, Karolinska Institute, Karolinska University Hospital, Stockholm, Sweden; Institute of Clinical Medicine, University of Oslo, Oslo, Norway; Department of Cancer Immunology, Institute for Cancer Research, Oslo University Hospital, Oslo, Norway.

Natural killer (NK) cells are innate immune cells that contribute to host defense against virus infections. NK cells respond to severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in vitro and are activated in patients with acute coronavirus disease 2019 (COVID-19). However, by which mechanisms NK cells detect SARS-CoV-2-infected cells remains largely unknown.

View Article and Find Full Text PDF

Integro-differential approach for modeling the COVID-19 dynamics - Impact of confinement measures in Italy.

Comput Biol Med

December 2021

Institute for Systems Analysis and Computer Science "Antonio Ruberti", National Research Council, Rome, Italy; Department of Computer, Control and Management Engineering "A. Ruberti" (DIAG), Sapienza University of Rome, Rome, Italy.

The COVID-19 pandemic has overwhelmed the life and security of most of the world countries, and especially of the Western countries, without similar experiences in the recent past. In a first phase, the response of health systems and governments was disorganized, but then incisive, also driven by the fear of a new and dramatic phenomenon. In the second phase, several governments, including Italy, accepted the doctrine of "coexistence with the virus" by putting into practice a series of containment measures aimed at limiting the dramatic sanitary consequences while not jeopardizing the economic and social stability of the country.

View Article and Find Full Text PDF

In this study, we used B16-F10 cells grown in the dorsal skinfold chamber (DSC) preparation that allowed us to gain optical access to the processes triggered by photodynamic therapy (PDT). Partial irradiation of a photosensitized melanoma triggered cell death in non-irradiated tumor cells. Multiphoton intravital microscopy with genetically encoded fluorescence indicators revealed that bystander cell death was mediated by paracrine signaling due to adenosine triphosphate (ATP) release from connexin (Cx) hemichannels (HCs).

View Article and Find Full Text PDF
Article Synopsis
  • Pancreatic ductal adenocarcinoma (PDAC) is resistant to immune checkpoint inhibitors due to its complex tumor and immune microenvironment, necessitating strategies to enhance immune response.
  • The study involved preclinical models of PDAC to test the effects of intratumoral injection of the Toll-like receptor 9 agonist IMO-2125, both alone and in combination with anti-PD1 therapy.
  • Results showed that IMO-2125 successfully triggered immune responses to combat local and distant tumors, particularly in high immunogenic subtypes, and that combining it with anti-PD1 improved outcomes even in less immunogenic cancers by creating a more favorable immune environment.
View Article and Find Full Text PDF

The Histamine and Multiple Sclerosis Alliance: Pleiotropic Actions and Functional Validation.

Curr Top Behav Neurosci

September 2022

IRCCS Santa Lucia Foundation-Preclinical Neuroscience, Rome, Italy.

Multiple sclerosis (MS) is a disease with a resilient inflammatory component caused by accumulation into the CNS of inflammatory infiltrates and macrophage/microglia contributing to severe demyelination and neurodegeneration. While the causes are still in part unclear, key pathogenic mechanisms are the direct loss of myelin-producing cells and/or their impairment caused by the immune system. Proposed etiology includes genetic and environmental factors triggered by viral infections.

View Article and Find Full Text PDF

Hepatic miR-144 Drives Fumarase Activity Preventing NRF2 Activation During Obesity.

Gastroenterology

December 2021

Center for Infectious Medicine (CIM), Department of Medicine, Karolinska Institutet, Huddinge, Sweden. Electronic address:

Background And Aims: Oxidative stress plays a key role in the development of metabolic complications associated with obesity, including insulin resistance and the most common chronic liver disease worldwide, nonalcoholic fatty liver disease. We have recently discovered that the microRNA miR-144 regulates protein levels of the master mediator of the antioxidant response, nuclear factor erythroid 2-related factor 2 (NRF2). On miR-144 silencing, the expression of NRF2 target genes was significantly upregulated, suggesting that miR-144 controls NRF2 at the level of both protein expression and activity.

View Article and Find Full Text PDF

Fly for ALS: Drosophila modeling on the route to amyotrophic lateral sclerosis modifiers.

Cell Mol Life Sci

September 2021

Preclinical Neuroscience, IRCCS Fondazione Santa Lucia, Via del Fosso di Fiorano 65, 00143, Rome, Italy.

Amyotrophic lateral sclerosis (ALS) is a rare, devastating disease, causing movement impairment, respiratory failure and ultimate death. A plethora of genetic, cellular and molecular mechanisms are involved in ALS signature, although the initiating causes and progressive pathological events are far from being understood. Drosophila research has produced seminal discoveries for more than a century and has been successfully used in the past 25 years to untangle the process of ALS pathogenesis, and recognize potential markers and novel strategies for therapeutic solutions.

View Article and Find Full Text PDF

Assessing the impact of data-driven limitations on tracing and forecasting the outbreak dynamics of COVID-19.

Comput Biol Med

August 2021

Institute for Systems Analysis and Computer Science "Antonio Ruberti", National Research Council, Rome, Italy; Department of Computer, Control and Management Engineering "A. Ruberti" (DIAG), Sapienza University of Rome, Rome, Italy. Electronic address:

The availability of the epidemiological data strongly affects the reliability of several mathematical models in tracing and forecasting COVID-19 pandemic, hampering a fair assessment of their relative performance. The marked difference between the lethality of the virus when comparing the first and second waves is an evident sign of the poor reliability of the data, also related to the variability over time in the number of performed swabs. During the early epidemic stage, swabs were made only to patients with severe symptoms taken to hospital or intensive care unit.

View Article and Find Full Text PDF
Article Synopsis
  • SARS-CoV-2 leads to COVID-19, which can cause severe health issues like respiratory problems and even death in about 2.15% of infected individuals.
  • Survivors often experience persistent post-COVID-19 syndrome (PPCS) with symptoms such as fatigue, memory loss, and trouble concentrating.
  • A study of 117 post-COVID-19 survivors found a significant increase in biological age and telomere shortening compared to 144 COVID-19-free individuals, suggesting possible epigenetic changes, especially in younger patients.
View Article and Find Full Text PDF

The continuous adherence to the conventional "one target, one drug" paradigm has failed so far to provide effective therapeutic solutions for heterogeneous and multifactorial diseases as amyotrophic lateral sclerosis (ALS), a rare progressive and chronic, debilitating neurological disease for which no cure is available. The present study is aimed at finding innovative solutions and paradigms for therapy in ALS pathogenesis, by exploiting new insights from Network Medicine and drug repurposing strategies. To identify new drug-ALS disease associations, we exploited SAveRUNNER, a recently developed network-based algorithm for drug repurposing, which quantifies the proximity of disease-associated genes to drug targets in the human interactome.

View Article and Find Full Text PDF

Where and Why Modeling Amyotrophic Lateral Sclerosis.

Int J Mol Sci

April 2021

Preclinical Neuroscience, IRCCS Santa Lucia Foundation, 00143 Rome, Italy.

Over the years, researchers have leveraged a host of different in vivo models in order to dissect amyotrophic lateral sclerosis (ALS), a neurodegenerative/neuroinflammatory disease that is heterogeneous in its clinical presentation and is multigenic, multifactorial and non-cell autonomous. These models include both vertebrates and invertebrates such as yeast, worms, flies, zebrafish, mice, rats, guinea pigs, dogs and, more recently, non-human primates. Despite their obvious differences and peculiarities, only the concurrent and comparative analysis of these various systems will allow the untangling of the causes and mechanisms of ALS for finally obtaining new efficacious therapeutics.

View Article and Find Full Text PDF

The metastatic cancer disease represents the real and urgent clinical need in oncology. Therefore, an understanding of the complex molecular mechanisms sustaining the metastatic cascade is critical to advance cancer therapies. Recent studies highlight how redox signaling influences the behavior of metastatic cancer cells, contributes to their travel in bloodstream from the primary tumor to the distant organs and conditions the progression of the micrometastases or their dormant state.

View Article and Find Full Text PDF

Huntington's disease (HD) is a life-threatening neurodegenerative disorder. Altered levels and functions of the purinergic ionotropic P2X7 receptors (P2X7Rs) have been found in animal and cellular models of HD, suggesting their possible role in the pathogenesis of the disease; accordingly, the therapeutic potential of P2X7R antagonists in HD has been proposed. Here we further investigated the effects of P2X7R ligands in and HD experimental models.

View Article and Find Full Text PDF
Article Synopsis
  • In 2008, guidelines were established for researching autophagy, which has since gained significant interest and new technologies, necessitating regular updates to monitoring methods across various organisms.
  • The new guidelines emphasize selecting appropriate techniques to evaluate autophagy while noting that no single method suits all situations; thus, a combination of methods is encouraged.
  • The document highlights that key proteins involved in autophagy also impact other cellular processes, suggesting genetic studies should focus on multiple autophagy-related genes to fully understand these pathways.
View Article and Find Full Text PDF