465 results match your criteria: "Institute for Physical and Theoretical Chemistry[Affiliation]"

The reaction of a cyclic alkyl(amino)carbene (CAAC)-stabilized thiazaborolo[5,4-d]thiazaborole (TzbTzb) with strong Brønsted acids, such as HCl, HOTf (Tf=O SCF ) and [H(OEt ) ][BAr ] (Ar =3,5-(CF ) C H ), results in the protonation of both TzbTzb nitrogen atoms. In each case X-ray crystallographic data show coordination of the counteranions (Cl , OTf , BAr ) or solvent molecules (OEt ) to the doubly protonated fused heterocycle via hydrogen-bonding interactions, the strength of which strongly influences the H NMR shift of the NH protons, enabling tuning of both the visible (yellow to red) and fluorescence (green to red) colors of these salts. DFT calculations reveal that the hydrogen bonding of the counteranion or solvent to the protonated nitrogen centers affects the intramolecular TzbTzb-to-CAAC charge transfer character involved in the S →S transition, ultimately enabling fine-tuning of their absorption and emission spectral features.

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Electron-Induced Decomposition of Different Silver(I) Complexes: Implications for the Design of Precursors for Focused Electron Beam Induced Deposition.

Nanomaterials (Basel)

May 2022

Institute for Applied and Physical Chemistry (IAPC), Fachbereich 2 (Chemie/Biologie), University of Bremen, Leobener Str. 5 (NW2), 28359 Bremen, Germany.

Focused electron beam induced deposition (FEBID) is a versatile tool to produce nanostructures through electron-induced decomposition of metal-containing precursor molecules. However, the metal content of the resulting materials is often low. Using different Ag(I) complexes, this study shows that the precursor performance depends critically on the molecular structure.

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Conformational Energy Benchmark for Longer -Alkane Chains.

J Phys Chem A

June 2022

Mulliken Center for Theoretical Chemistry, Institute for Physical and Theoretical Chemistry, University of Bonn, Beringstrasse 4, 53115 Bonn, Germany.

We present the first benchmark set focusing on the conformational energies of highly flexible, long -alkane chains, termed ACONFL. Unbranched alkanes are ubiquitous building blocks in nature, so the goal is to be able to calculate their properties most accurately to improve the modeling of, e.g.

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Transitions into the first excited state of carotenoids, Car S, are optically forbidden in conventional one-photon excitation (OPE) but are possible via two-photon excitation (TPE). This can be used to quantify the amount of Car S to Chlorophyll (Chl) energy transfer in pigment-protein complexes and plants by observing the chlorophyll fluorescence intensity after TPE in comparison to the intensity observed after direct chlorophyll OPE. A parameter, Φ , can be derived that directly reflects relative differences or changes in the Car S → Chl energy transfer of different pigment-protein complexes and even living plants.

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Evaporation and Molecular Beam Scattering from a Flat Liquid Jet.

J Phys Chem A

June 2022

Department of Chemistry, University of California, Berkeley, California 94720, United States.

An experimental setup for molecular beam scattering from flat liquid sheets has been developed, with the goal of studying reactions at gas-liquid interfaces for volatile liquids. Specifically, a crossed molecular beam instrument that can measure angular and translational energy distributions of scattered products has been adapted for liquid jet scattering. A microfluidic chip is used to create a stable flat liquid sheet inside vacuum from which scattering occurs, and both evaporation and scattering from this sheet are characterized using a rotatable mass spectrometer that can measure product time-of-flight distributions.

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Mechanistic insights into the size-dependent effects of nanoparticles on inhibiting and accelerating amyloid fibril formation.

J Colloid Interface Sci

September 2022

Leibniz Institute of Surface Engineering (IOM), Permoserstraße 15, 04318 Leipzig, Germany; Wilhelm-Ostwald-Institute for Physical and Theoretical Chemistry, Leipzig University, Linnéstraße 3, 04103 Leipzig, Germany. Electronic address:

Article Synopsis
  • The study investigates how nanoparticles (NPs) influence the aggregation of peptides into amyloid fibrils, which are linked to diseases like Alzheimer's and type 2 diabetes.
  • NPs of different sizes and curvatures were found to have varying effects: smaller 5 nm gold NPs generally inhibit peptide aggregation, while larger 20 nm NPs often accelerate it.
  • The findings suggest that the interaction between peptide properties and NP characteristics can inform the design of nanostructured materials for therapeutic purposes.
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The absolute molecular entropy is a fundamental quantity for the accurate description of thermodynamic properties. For non-rigid molecules, a substantial part of the entropy can be attributed to a conformational contribution. Systems and properties where this is relevant, , protein-ligand binding affinities or p values refer usually to the liquid phase.

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Glyphosate (N-phosphonomethylglycine; GLP) and its main metabolite AMPA (aminomethylphosphonic acid), are frequently detected in relatively high concentrations in European agricultural topsoils. Glyphosate has a high sorption affinity, yet it can be detected occasionally in groundwater. We hypothesized that shrinkage cracks occurring after dry periods could facilitate GLP transport to greater depths where subsoil conditions slow further microbial degradation.

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The primary phosphines MesPH and tBuPH react with 9-iodo-m-carborane yielding B9-connected secondary carboranylphosphines 1,7-H C B H -9-PHR (R=2,4,6-Me C H (Mes; 1 a), tBu (1 b)). Addition of tris(pentafluorophenyl)borane (BCF) to 1 a, b resulted in the zwitterionic compounds 1,7-H C B H -9-PHR(p-C F )BF(C F ) (2 a, b) through nucleophilic para substitution of a C F ring followed by fluoride transfer to boron. Further reaction with Me SiHCl prompted a H-F exchange yielding the zwitterionic compounds 1,7-H C B H -9-PHR(p-C F )BH(C F ) (3 a, b).

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The reactivity of three 1,2-dialkynyl-1,2-diaminodiborane(4) derivatives, B(NMe)(CCR) (R = H, Me, SiMe), towards small molecules known to react with both B-B and CC bonds was studied. With arylazides nitrene insertion into the B-B bond with concomitant loss of N was kinetically favoured in all cases. While reactions with sterically unhindered hydroboranes proceeded unselectively, sterically encumbered dimesitylborane cleanly added to both alkynyl moieties, resulting in the first examples of 1,2-divinyldiboranes(4).

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UREMP, RO-REMP, and OO-REMP: Hybrid perturbation theories for open-shell electronic structure calculations.

J Chem Phys

March 2022

Institute for Physical and Theoretical Chemistry, Eberhard Karls University Tübingen, Auf der Morgenstelle 18, 72076 Tübingen, Germany.

An accurate description of the electron correlation energy in closed- and open-shell molecules is shown to be obtained by a second-order perturbation theory (PT) termed REMP. REMP is a hybrid of the Retaining the Excitation degree (RE) and the Møller-Plesset (MP) PTs. It performs particularly encouragingly in an orbital-optimized variant (OO-REMP) where the reference wavefunction is given by an unrestricted Slater determinant whose spin orbitals are varied such that the total energy becomes a minimum.

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BN-Substitution in Dithienylpyrenes Prevents Excimer Formation in Solution and in the Solid State.

J Phys Chem C Nanomater Interfaces

March 2022

Institute for Analytical and Organic Chemistry, University of Bremen, Leobener Straße 7, D-28359 Bremen, Germany.

Boron-nitrogen substitutions in polycyclic aromatic hydrocarbons (PAHs) have a strong impact on the optical properties of the molecules due to a significantly more heterogeneous electron distribution. However, besides these single-molecule properties, the observed optical properties of PAHs critically depend on the degree of intermolecular interactions such as π-π-stacking, dipolar interactions, or the formation of dimers in the excited state. Pyrene is the most prominent example showing the latter as it exhibits a broadened and strongly bathochromically shifted emission band at high concentrations in solution compared to the respective monomers.

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Electrophilic activation of difunctional aminoboranes: B-N coupling intramolecular Cl/Me exchange.

Chem Commun (Camb)

April 2022

Institute of Inorganic Chemistry and Institute for Sustainable Chemistry & Catalysis with Boron (ICB), Julius-Maximilians-Universität Würzburg, Am Hubland, 97074 Würzburg, Germany.

Treatment of an -silyl--chloro-aminoborane with substoichio-metric quantities of MeSiOTf afforded B-N coupling, whereas activation with 5 mol% of Ag[Al{OC(CF)}] led to Cl/Me exchange between the boron and the silicon center. Combined experimental and computational studies of the latter process support a chain reaction that is initiated by nucleation-limited chloride abstraction.

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Photocatalytic H production and degradation of aqueous 2-chlorophenol over B/N-graphene-coated Cu/TiO: A DFT, experimental and mechanistic investigation.

J Environ Manage

March 2022

Institut für Technische Chemie, Gottfried Wilhelm Leibniz Universität Hannover, Callinstrasse 3, Hannover, 30167, Germany; Laboratorium für Nano- und Quantenengineering, Gottfried Wilhelm Leibniz Universität Hannover, Schneiderberg 39, Hannover, 30167, Germany; Laboratory for Photoactive Nanocomposite Materials, Department of Photonics, Faculty of Physics, Saint-Petersburg State University, Ulianovskaia Str. 3, Peterhof, Saint-Petersburg, 198504, Russia.

Energy and environmental challenges are global concerns that scientists are interested in alleviating. It is on this premise that we prepared boron/nitrogen graphene-coated Cu/TiO (B/N-graphene-coated Cu/TiO) photocatalyst of varying B:N ratios with dual functionality of H production and 2-Chlorophenol (2-CP) degradation. In-situ coating of Cu with B/N-graphene is achieved via solvothermal synthesis and calcination under an inert atmosphere.

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In organic mass spectrometry, fragment ions provide important information on the analyte as a central part of its structure elucidation. With increasing molecular size and possible protonation sites, the potential energy surface (PES) of the analyte can become very complex, which results in a large number of possible fragmentation patterns. Quantum chemical (QC) calculations can help here, enabling the fast calculation of the PES and thus enhancing the mass spectrometry-based structure elucidation processes.

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The Ionic Product of Water in the Eye of the Quantum Cluster Equilibrium.

Molecules

February 2022

Otto Schott Institute of Materials Research, Faculty of Physics and Astronomy, Friedrich-Schiller-Universität Jena, Löbdergraben 32, 07743 Jena, Germany.

The theoretical description of water properties continues to be a challenge. Using quantum cluster equilibrium (QCE) theory, we combine state-of-the-art quantum chemistry and statistical thermodynamic methods with the almost historical Clausius-Clapeyron relation to study water self-dissociation and the thermodynamics of vaporization. We pay particular attention to the treatment of internal rotations and their impact on the investigated properties by employing the modified rigid-rotor-harmonic-oscillator (mRRHO) approach.

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Benchmark Study on the Calculation of Sn NMR Chemical Shifts.

Inorg Chem

March 2022

Mulliken Center for Theoretical Chemistry, Institute for Physical and Theoretical Chemistry, University of Bonn, Beringstr. 4, 53115 Bonn, Germany.

A new benchmark set termed for assessing quantum chemical methods for the computation of Sn NMR chemical shifts is presented. It covers 51 unique Sn NMR chemical shifts for a selection of 50 tin compounds with diverse bonding motifs and ligands. The experimental reference data are in the spectral range of ±2500 ppm measured in seven different solvents.

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Light-harvesting concentrators have a high potential to make highly efficient but precious energy converters, such as multijunction photovoltaics, more affordable for everyday applications. They collect sunlight, including diffusively scattered light, on large areas and redirect it to much smaller areas of the highly efficiency solar cells. Among the best current concepts are pools of randomly oriented light-collecting donor molecules that transfer all excitons to few aligned acceptors reemitting the light in the direction of the photovoltaics.

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Watching events of membrane fusion in real time and distinguishing between intermediate steps of these events is useful for mechanistic insights but at the same time a challenging task. In this chapter, we describe how to use fluorescence cross-correlation spectroscopy and Förster-resonance energy transfer to resolve the tethering and fusion of membranes by SNARE proteins (syntaxin-1, SNAP-25, and synaptobrevin-2) as an example. The given protocols can easily be adapted to other membrane proteins to investigate their ability to tether or even fuse vesicular membrane.

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Fluorescence Cross-Correlation Spectroscopy (FCCS) is a well-established and useful tool in physics and chemistry. Furthermore, due to its hybrid character of being a bulk assay at a single molecular level, it found many applications in biophysics and molecular biochemistry. Examples may be investigating kinetics and dynamics of chemical and biochemical reactions such as protein-ligand-, protein-protein-binding, fast conformational changes, and intracellular transportation.

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The present paper describes a compact point of care (POC) optical device for therapeutic drug monitoring (TDM). The core of the device is a disposable plastic chip where an immunoassay for the determination of immunosuppressants takes place. The chip is designed in order to have ten parallel microchannels allowing the simultaneous detection of more than one analyte with replicate measurements.

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Octanol/water (), octanol/air (), and hexadecane/air () partition coefficients are calculated for 67 organic compounds of environmental concern using computational chemistry. The extended CRENSO workflow applied here includes the calculation of extensive conformer ensembles with semiempirical methods and refinement through density functional theory, taking into account solvation models, especially COSMO-RS, and thermostatistical contributions. This approach is particularly advantageous for describing large and nonrigid molecules.

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Elemental tellurium readily dissolves in ionic liquids (ILs) based on tetraalkylphosphonium cations even at temperatures below 100 °C. In the case of ILs with acetate, decanoate, or dicyanamide anions, dark red to purple colored solutions form. A study combining NMR, UV-Vis and Raman spectroscopy revealed the formation of tellurium anions (Te ) with chain lengths up to at least n=5, which are in dynamic equilibrium with each other.

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Substrate Effects on the Bandwidth of CdSe Quantum Dot Photodetectors.

ACS Appl Mater Interfaces

October 2021

Institute for Physical and Theoretical Chemistry, University of Tübingen, Tübingen 72076, Germany.

We investigate the time-resolved photocurrent response of CdSe quantum dot (QD) thin films sensitized with zinc β-tetraaminophthalocyanine (Zn4APc) (Kumar , , 2019, 11, 48271-48280) on three different substrates, namely, silicon with 230 nm SiO dielectric, glass, and polyimide. While Si/SiO (230 nm) is not suitable for any transient photocurrent characterization due to an interfering photocurrent response of the buried silicon, we find that polyimide substrates invoke the larger optical bandwidth with 85 kHz vs 67 kHz for the same quantum dot thin film on glass. Upon evaluation of the transient photocurrent, we find that the photoresponse of the CdSe quantum dot films can be described as a combination of carrier recombination and fast trapping within 2.

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Minimalistic 2-(oxazolinyl)-phenols substituted with different electron-donating and -withdrawing groups as well as 1,2,5-chalcogenadiazole-annulated derivatives thereof were synthesized and investigated in regard to their emission behavior in solution as well as in the solid state. Depending on the nature of the incorporated substituent and its position, emission efficiencies were increased or diminished, resulting in AIE or ACQ characteristics. Single-crystal analysis revealed J- and H-type packing motifs and a so-far undescribed isolation of ESIPT-based fluorophores in the keto form.

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