1,261 results match your criteria: "Institute for Personalized Medicine[Affiliation]"

A refined formula derived from Jiawei-Xiaoyao pill exerts rapid antidepressant-like effects in LPS-induced depression by reducing neuroinflammation and restoring neuroplasticity signaling.

J Ethnopharmacol

December 2024

Interdisciplinary Institute for Personalized Medicine in Brain Disorders, School of Chinese Medicine, Jinan University, Guangzhou, 510632, PR China; Zhuhai Institute of Jinan University, Zhuhai, 519070, PR China; Guangdong-Hong Kong-Macao Joint Laboratory of Traditional Chinese Medicine on Brain-Peripheral Homeostasis and Comprehensive Health, Jinan University, Guangzhou, 510632, PR China; Departments of Psychiatry & Clinical and Translational Institute of Psychiatric Disorders, First Affiliated Hospital of Jinan University, Guangzhou, 510632, PR China. Electronic address:

Ethnopharmacological Relevance: Jiawei-Xiaoyao Pill (JWX), a classic formula in traditional Chinese medicine, is derived from Xiaoyao Pill by adding significant amounts of Gardeniae Fructus (GF) and Moutan Cortex (MC). It is frequently used for the treatment of depression. JWX has been demonstrated to uniquely elicit rapid antidepressant-like effects within the prescribed dosage range.

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We review the abnormal bone turnover that is the basis of idiopathic inflammatory or rheumatoid arthritis and bone loss, with emphasis on Tumor Necrosis Factor-alpha (TNFα)-related mechanisms. We review selected data on idiopathic arthritis in juvenile human disease, and discuss mouse models focusing on induction of bone resorbing cells by TNFα and Receptor Activator of Nuclear Factor kappa B Ligand (RANKL). In both humans and animal models, macrophage-derived cells in the joint, particularly in the synovium and periosteum, degrade bone and cartilage.

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Nutrition plays a key role in the comprehensive care of critically ill patients. Determining optimal nutrition strategy, however, remains a subject of intense debate. Artificial intelligence (AI) applications are becoming increasingly common in medicine, and specifically in critical care, driven by the data-rich environment of intensive care units.

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T cells are essential tumor suppressors in cancer immunology, but their dysfunction induced by cancer cells can result in T cell exhaustion. Exhausted T cells (Tex) significantly influence the tumor immune environment, and thus, there is a need for their thorough investigation across different types of cancer. Here, we address the role of Tex cells in pan-cancer, focusing on the expression, mutations, methylation, immune infiltration, and drug sensitivity of a molecular signature comprising of the genes HAVCR2, CXCL13, LAG3, LAYN, TIGIT, and PDCD1across multiple cancer types, using bioinformatics analysis of TCGA data.

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Hippocampal PACAP signaling activation triggers a rapid antidepressant response.

Mil Med Res

July 2024

Interdisciplinary Institute for Personalized Medicine in Brain Disorders, Jinan University, Guangzhou, 510632, China.

Background: The development of ketamine-like rapid antidepressants holds promise for enhancing the therapeutic efficacy of depression, but the underlying cellular and molecular mechanisms remain unclear. Implicated in depression regulation, the neuropeptide pituitary adenylate cyclase-activating polypeptide (PACAP) is investigated here to examine its role in mediating the rapid antidepressant response.

Methods: The onset of antidepressant response was assessed through depression-related behavioral paradigms.

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G6PC3 deficiency is a monogenic immunometabolic disorder that causes syndromic congenital neutropenia. Patients display heterogeneous extra-hematological manifestations, contributing to delayed diagnosis. Here, we investigated the origin and functional consequence of the c.

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Article Synopsis
  • - Precision medicine aims to enhance the accuracy and reliability of health recommendations while ensuring safety and cost-effectiveness, but faces challenges due to the diverse nature of diseases and the lack of standardized reporting in research.
  • - The BePRECISE consortium, made up of 23 experts, developed a 23-item checklist to improve the reporting of precision medicine research, using a thorough review process to create guidelines.
  • - The checklist promotes inclusivity in research by emphasizing health equity, encouraging the involvement of under-represented communities, which can help with the effective and fair application of precision medicine in clinical settings.
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PARG is essential for Polθ-mediated DNA end-joining by removing repressive poly-ADP-ribose marks.

Nat Commun

July 2024

Fels Cancer Institute for Personalized Medicine, Lewis Katz School of Medicine, Temple University, Philadelphia, PA, 19140, USA.

Article Synopsis
  • DNA polymerase theta (Polθ) is a protein involved in repairing DNA double-strand breaks and helps cells resist harmful agents.
  • The regulation of Polθ's activity in this repair process, known as TMEJ (Theta-Mediated End Joining), involves a two-step mechanism where PARP1 first attaches a modification (PARylation) to Polθ, bringing it to damage sites but rendering it inactive.
  • The enzyme PARG then removes this modification, restoring Polθ's ability to bind DNA and perform the repair, making PARG crucial for the activation of TMEJ in response to DNA damage.
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The mouse multi-organ proteome from infancy to adulthood.

Nat Commun

July 2024

Department of Anesthesiology and Surgical Intensive Care Unit, Xinhua Hospital, School of Medicine and School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, China.

The early-life organ development and maturation shape the fundamental blueprint for later-life phenotype. However, a multi-organ proteome atlas from infancy to adulthood is currently not available. Herein, we present a comprehensive proteomic analysis of ten mouse organs (brain, heart, lung, liver, kidney, spleen, stomach, intestine, muscle and skin) at three crucial developmental stages (1-, 4- and 8-weeks after birth) acquired using data-independent acquisition mass spectrometry.

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The Ser/Thr protein phosphatase 2 A (PP2A) regulates the dephosphorylation of many phosphoproteins. Substrate recognition are mediated by B regulatory subunits. Here, we report the identification of a substrate conserved motif [RK]-V-x-x-[VI]-R in FAM122A, an inhibitor of B55α/PP2A.

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Quantitative Proteomics and Metabolomics of Culture Medium from Single Human Embryo Reveal Embryo Quality-Related Multiomics Biomarkers.

Anal Chem

July 2024

Department of Anesthesiology and Surgical Intensive Care Unit, Xinhua Hospital, School of Medicine and School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai 200030, China.

An effective tool to assess embryo quality in the assisted reproduction clinical practice will enhance successful implantation rates and mitigate high risks of multiple pregnancies. Potential biomarkers secreted into culture medium (CM) during embryo development enable rapid and noninvasive methods of assessing embryo quality. However, small volumes, low biomolecule concentrations, and impurity interference collectively preclude the identification of quality-related biomarkers in single blastocyst CM.

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Background: The advent of liquid biopsies presents a novel, minimally invasive methodology for the detection of disease biomarkers, offering a significant advantage over traditional biopsy techniques. Particularly, the analysis of cell-free RNA (cfRNA) has garnered interest due to its dynamic expression profiles and the capability to study various RNA species, including messenger RNA (mRNA) and long non-coding RNA (lncRNA). These attributes position cfRNA as a versatile biomarker with broad potential applications in clinical research and diagnostics.

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Association of genetic risk, lifestyle, and their interaction with obesity and obesity-related morbidities.

Cell Metab

July 2024

Department of Digital Health, Samsung Advanced Institute for Health Sciences & Technology (SAIHST), Sungkyunkwan University, Seoul 06355, Republic of Korea; Samsung Genome Institute, Samsung Medical Center, Seoul 06351, Republic of Korea. Electronic address:

The extent to which modifiable lifestyle factors offset the determined genetic risk of obesity and obesity-related morbidities remains unknown. We explored how the interaction between genetic and lifestyle factors influences the risk of obesity and obesity-related morbidities. The polygenic score for body mass index was calculated to quantify inherited susceptibility to obesity in 338,645 UK Biobank European participants, and a composite lifestyle score was derived from five obesogenic factors (physical activity, diet, sedentary behavior, alcohol consumption, and sleep duration).

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Boronic Acid-Rich Lanthanide Metal-Organic Frameworks Enable Deep Proteomics with Ultratrace Biological Samples.

Adv Mater

August 2024

Department of Anesthesiology and Surgical Intensive Care Unit, Xinhua Hospital, School of Medicine and School of Biomedical Engineering, Shanghai Jiao Tong University, Shanghai, 200030, P. R. China.

Label-free proteomics is widely used to identify disease mechanism and potential therapeutic targets. However, deep proteomics with ultratrace clinical specimen remains a major technical challenge due to extensive contact loss during complex sample pretreatment. Here, a hybrid of four boronic acid-rich lanthanide metal-organic frameworks (MOFs) with high protein affinity is introduced to capture proteins in ultratrace samples jointly by nitrogen-boronate complexation, cation-π and ionic interactions.

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Preclinical evaluation of ELP-004 in mice.

Pharmacol Res Perspect

August 2024

Department of Microbiology, Immunology, and Cell Biology, West Virginia University School of Medicine, Morgantown, West Virginia, USA.

This study provides a detailed understanding of the preclinical pharmacokinetics and metabolism of ELP-004, an osteoclast inhibitor in development for the treatment of bone erosion. Current treatments for arthritis, including biological disease-modifying antirheumatic drugs, are not well-tolerated in a substantial subset of arthritis patients and are expensive; therefore, new treatments are needed. Pharmacokinetic parameters of ELP-004 were tested with intravenous, oral, and subcutaneous administration and found to be rapidly absorbed and distributed.

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Article Synopsis
  • Large national electronic health record (EHR) datasets provide insights into the interaction between genetics and environmental factors through detailed patient information.
  • A new spatial mixed linear effect (SMILE) model was created to analyze data from 257,620 family units, incorporating geographic and environmental data alongside genetic measurements.
  • Findings reveal that air pollutants like particulate matter and nitrogen dioxide significantly impact 135 diseases across various categories, highlighting the potential for integrating large EHR datasets in understanding disease risk in precision medicine.
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Use of Diagnostic Codes for Primary Open-Angle Glaucoma Polygenic Risk Score Construction in Electronic Health Record-Linked Biobanks.

Am J Ophthalmol

November 2024

Department of Ophthalmology (J.K., U.G., K.S., Y.Z., Y.L., D.S.F., J.L.W., A.V.S., N.Z.), Massachusetts Eye and Ear, Harvard Medical School, Boston, Massachusetts, USA. Electronic address:

Purpose: Polygenic risk scores (PRSs) likely predict risk and prognosis of glaucoma. We compared the PRS performance for primary open-angle glaucoma (POAG), defined using International Classification of Diseases (ICD) codes vs manual medical record review.

Design: Retrospective cohort study.

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Integrating Genetic and Transcriptomic Data to Identify Genes Underlying Obesity Risk Loci.

medRxiv

June 2024

Department of Biostatistics, School of Public Health, Boston University, 801 Massachusettes Ave, Boston, MA, 02118, USA.

Genome-wide association studies (GWAS) have identified numerous body mass index (BMI) loci. However, most underlying mechanisms from risk locus to BMI remain unknown. Leveraging omics data through integrative analyses could provide more comprehensive views of biological pathways on BMI.

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Breast cancer is one of the leading causes of mortality among women. The tumour microenvironment, consisting of host cells and extracellular matrix, has been increasingly studied for its interplay with cancer cells, and the resulting effect on tumour progression. While the breast is one of the most innervated organs in the body, the role of neurons, and specifically sensory neurons, has been understudied, mostly for technical reasons.

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Article Synopsis
  • Coronary artery disease (CAD) involves a mix of risk factors and processes, and a new machine learning-based score can help track its progression and severity.
  • Researchers tested this score against rare gene variants in different biobanks and found significant associations in 17 genes, with 14 receiving prior support related to CAD.
  • The study suggests that there are likely more ultrarare gene variants associated with CAD, highlighting how digital tools can improve genetic research in complex diseases.
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Article Synopsis
  • The intestinal microbiota plays a crucial role in the development of colorectal cancer (CRC), possibly influencing DNA methylation.
  • In a study of 203 CRC tumor cases, researchers found significant enrichment of specific bacteria (including those labeled "Superhigh") in CIMP-positive samples, indicating a potential link between gut bacteria and tumor characteristics.
  • Using data from The Cancer Genome Atlas, the study demonstrated that these bacterial populations were associated with alterations in DNA methylation, suggesting that microbiota could be a factor in CRC progression through its influence on epigenetic changes.
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Zexieyin formula alleviates Alzheimer's disease via post-synaptic CaMKII modulating AMPA receptor: Involved in promoting neurogenesis to strengthen synaptic plasticity in mice hippocampus.

Phytomedicine

August 2024

Key Laboratory of Integrative Biomedicine for Brain Diseases, School of Chinese Medicine, Nanjing University of Chinese Medicine, Nanjing 210023, PR China; National Famous Chinese Medicine Expert Inheritance Studio (Meng Jingchun), Nanjing University of Chinese Medicine, School of Chinese Medicine, Nanjing 210023, PR China. Electronic address:

Background: Alzheimer's disease (AD) is a serious neurodegenerative disease and brings a serious burden to society and families. Due to lack of effective drugs for the treatment of AD, it's urgent to develop new and effective drug for the treatment of AD.

Purpose: The study aimed to investigate the potential of Zexieyin formula (ZXYF), a Chinese medicine formula, for the treatment of AD and its potential mechanism of action.

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Article Synopsis
  • Malnutrition is often undiagnosed, leading to worse health outcomes and higher costs, prompting the Mount Sinai Health System to implement a machine learning model (MUST-Plus) for detection upon hospital admission.* -
  • The study analyzed data from nearly 67,000 adult patients to assess and improve the calibration of MUST-Plus, revealing significant miscalibration across different races and genders, particularly in its predictions.* -
  • After logistic recalibration, the model's accuracy improved for all patient subgroups, highlighting the importance of ongoing monitoring and adjustment to reduce healthcare disparities.*
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A survey of k-mer methods and applications in bioinformatics.

Comput Struct Biotechnol J

December 2024

Institute for Personalized Medicine, Department of Biochemistry and Molecular Biology, The Pennsylvania State University College of Medicine, Hershey, PA, USA.

Article Synopsis
  • The advancements in genomics and proteomics are fueled by new sequencing technologies and large datasets, requiring efficient algorithms for data processing.
  • K-mers are highlighted as a powerful tool for handling extensive sequencing data, offering computational efficiency and possible biological relevance.
  • The review discusses the importance of k-mers and absent sequences like nullomers and nullpeptides in applications ranging from disease detection to vaccine development and research breakthroughs.
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Most people with intellectual disability (ID) do not receive a molecular diagnosis following genetic testing. To identify new etiologies of ID, we performed a genetic association analysis comparing the burden of rare variants in 41,132 noncoding genes between 5,529 unrelated cases and 46,401 unrelated controls. RNU4-2, which encodes U4 small nuclear RNA, a critical component of the spliceosome, was the most strongly associated gene.

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